RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
LRP8-201ENST00000306052 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
LRP8-201ENST00000306052 ATP10AO60312 1499 aa17.17■□□□□ 0.34
LRP8-201ENST00000306052 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
LRP8-201ENST00000306052 GOLGA6L10A6NI86 522 aa17.16■□□□□ 0.34
LRP8-201ENST00000306052 KIAA0754O94854 1291 aa17.16■□□□□ 0.34
LRP8-201ENST00000306052 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
LRP8-201ENST00000306052 ERLIN2O94905 339 aa17.16■□□□□ 0.34
LRP8-201ENST00000306052 FILIP1LQ4L180 1135 aa17.16■□□□□ 0.34
LRP8-201ENST00000306052 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
LRP8-201ENST00000306052 CABLES1Q8TDN4 633 aa17.15■□□□□ 0.34
LRP8-201ENST00000306052 MCM2P49736 904 aa17.15■□□□□ 0.34
LRP8-201ENST00000306052 C19orf44Q9H6X5 657 aa17.15■□□□□ 0.34
LRP8-201ENST00000306052 EMILIN1Q9Y6C2 1016 aa17.15■□□□□ 0.34
LRP8-201ENST00000306052 ERC2O15083 957 aa17.15■□□□□ 0.34
LRP8-201ENST00000306052 MPHOSPH8Q99549 860 aa17.15■□□□□ 0.34
LRP8-201ENST00000306052 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
LRP8-201ENST00000306052 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
LRP8-201ENST00000306052 SEPT11Q9NVA2 429 aaKnown RBP17.14■□□□□ 0.33
LRP8-201ENST00000306052 MCM10Q7L590 875 aa17.14■□□□□ 0.33
LRP8-201ENST00000306052 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
LRP8-201ENST00000306052 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
LRP8-201ENST00000306052 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
LRP8-201ENST00000306052 FCHSD2O94868 740 aa17.13■□□□□ 0.33
LRP8-201ENST00000306052 RBM5P52756 815 aaKnown RBP eCLIP17.13■□□□□ 0.33
LRP8-201ENST00000306052 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
LRP8-201ENST00000306052 SURF6O75683 361 aaKnown RBP17.13■□□□□ 0.33
LRP8-201ENST00000306052 SERPINC1P01008 464 aa17.12■□□□□ 0.33
LRP8-201ENST00000306052 PPM1FP49593 454 aaPredicted RBP17.12■□□□□ 0.33
LRP8-201ENST00000306052 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
LRP8-201ENST00000306052 CNTROBQ8N137 903 aa17.12■□□□□ 0.33
LRP8-201ENST00000306052 ZNF652Q9Y2D9 606 aa17.12■□□□□ 0.33
LRP8-201ENST00000306052 GNAI3P08754 354 aa17.12■□□□□ 0.33
LRP8-201ENST00000306052 CCDC181Q5TID7 509 aa17.12■□□□□ 0.33
LRP8-201ENST00000306052 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
LRP8-201ENST00000306052 PSMA5P28066 241 aa17.12■□□□□ 0.33
LRP8-201ENST00000306052 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
LRP8-201ENST00000306052 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
LRP8-201ENST00000306052 CLASRPQ8N2M8 674 aaKnown RBP17.11■□□□□ 0.33
LRP8-201ENST00000306052 SIL1Q9H173 461 aa17.11■□□□□ 0.33
LRP8-201ENST00000306052 EIF3JO75822 258 aaKnown RBP17.11■□□□□ 0.33
LRP8-201ENST00000306052 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
LRP8-201ENST00000306052 CCDC57Q2TAC2 916 aa17.11■□□□□ 0.33
LRP8-201ENST00000306052 WDR33Q9C0J8 1336 aaKnown RBP17.11■□□□□ 0.33
LRP8-201ENST00000306052 TXLNAP40222 546 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 STK3Q13188 491 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 TBC1D2BQ9UPU7 963 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 KCNA6P17658 529 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 ANKRD18AQ8IVF6 992 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 GPATCH11Q8N954 259 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
LRP8-201ENST00000306052 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
LRP8-201ENST00000306052 SCAF11Q99590 1463 aaKnown RBP17.1■□□□□ 0.33
LRP8-201ENST00000306052 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
LRP8-201ENST00000306052 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
LRP8-201ENST00000306052 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
LRP8-201ENST00000306052 GBP2P32456 591 aaPredicted RBP17.09■□□□□ 0.33
LRP8-201ENST00000306052 TTC39AQ5SRH9 613 aa17.09■□□□□ 0.33
LRP8-201ENST00000306052 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.33
LRP8-201ENST00000306052 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
LRP8-201ENST00000306052 ZNHIT6Q9NWK9 470 aaKnown RBP17.08■□□□□ 0.32
LRP8-201ENST00000306052 CALCOCO1Q9P1Z2 691 aa17.08■□□□□ 0.32
LRP8-201ENST00000306052 FILIP1Q7Z7B0 1213 aa17.08■□□□□ 0.32
LRP8-201ENST00000306052 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
LRP8-201ENST00000306052 POLR3GO15318 223 aaPredicted RBP17.07■□□□□ 0.32
LRP8-201ENST00000306052 ERLIN1O75477 346 aa17.07■□□□□ 0.32
LRP8-201ENST00000306052 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
LRP8-201ENST00000306052 USP8P40818 1118 aa17.07■□□□□ 0.32
LRP8-201ENST00000306052 GNAI2P04899 355 aa17.07■□□□□ 0.32
LRP8-201ENST00000306052 SSR1P43307 286 aaKnown RBP17.07■□□□□ 0.32
LRP8-201ENST00000306052 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
LRP8-201ENST00000306052 MAP4K4O95819 1239 aaPredicted RBP17.06■□□□□ 0.32
LRP8-201ENST00000306052 PDCP20941 246 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 SRCIN1Q9C0H9 1055 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 NEBLO76041 1014 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 TMCO3Q6UWJ1 677 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
LRP8-201ENST00000306052 CAMK4Q16566 473 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 GIMAP7Q8NHV1 300 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 DYDC1Q8WWB3 177 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
LRP8-201ENST00000306052 FBLN1P23142 703 aa17.05■□□□□ 0.32
LRP8-201ENST00000306052 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
LRP8-201ENST00000306052 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
LRP8-201ENST00000306052 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
LRP8-201ENST00000306052 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
LRP8-201ENST00000306052 ZNF396Q96N95 335 aaPredicted RBP17.05■□□□□ 0.32
LRP8-201ENST00000306052 PPFIBP1Q86W92 1011 aa17.05■□□□□ 0.32
LRP8-201ENST00000306052 UBXN4Q92575 508 aa17.05■□□□□ 0.32
LRP8-201ENST00000306052 GOLGA6L7A0A1B0GV03 622 aa17.04■□□□□ 0.32
LRP8-201ENST00000306052 TNPO1Q92973 898 aaKnown RBP17.04■□□□□ 0.32
LRP8-201ENST00000306052 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
LRP8-201ENST00000306052 NUP62CLQ9H1M0 184 aa17.04■□□□□ 0.32
LRP8-201ENST00000306052 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
LRP8-201ENST00000306052 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
LRP8-201ENST00000306052 DYNC1I1O14576 645 aa17.04■□□□□ 0.32
LRP8-201ENST00000306052 KRT85P78386 507 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms