RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 CHMP5Q9NZZ3 219 aa23.1■■□□□ 1.29
RNF139-201ENST00000303545 BRPF3Q9ULD4 1205 aa23.1■■□□□ 1.29
RNF139-201ENST00000303545 NFAT5O94916 1531 aa23.09■■□□□ 1.29
RNF139-201ENST00000303545 GCP02774 474 aa23.09■■□□□ 1.29
RNF139-201ENST00000303545 LRRFIP2Q9Y608 721 aaKnown RBP23.09■■□□□ 1.29
RNF139-201ENST00000303545 FAM208AQ9UK61 1670 aaKnown RBP23.09■■□□□ 1.29
RNF139-201ENST00000303545 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
RNF139-201ENST00000303545 ARXQ96QS3 562 aa23.08■■□□□ 1.29
RNF139-201ENST00000303545 NPHP4O75161 1426 aaPredicted RBP23.08■■□□□ 1.28
RNF139-201ENST00000303545 USP54Q70EL1 1684 aa23.07■■□□□ 1.28
RNF139-201ENST00000303545 KCNH5Q8NCM2 988 aa23.07■■□□□ 1.28
RNF139-201ENST00000303545 RTN4Q9NQC3 1192 aaKnown RBP23.07■■□□□ 1.28
RNF139-201ENST00000303545 HSP90AA1P07900 732 aaKnown RBP23.06■■□□□ 1.28
RNF139-201ENST00000303545 PROSER2Q86WR7 435 aaPredicted RBP23.06■■□□□ 1.28
RNF139-201ENST00000303545 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
RNF139-201ENST00000303545 SNX21Q969T3 373 aa23.06■■□□□ 1.28
RNF139-201ENST00000303545 GZF1Q9H116 711 aaPredicted RBP23.05■■□□□ 1.28
RNF139-201ENST00000303545 CHPF2Q9P2E5 772 aa23.05■■□□□ 1.28
RNF139-201ENST00000303545 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
RNF139-201ENST00000303545 ZNF142P52746 1687 aaPredicted RBP23.04■■□□□ 1.28
RNF139-201ENST00000303545 MCM4P33991 863 aa23.04■■□□□ 1.28
RNF139-201ENST00000303545 TEFQ10587 303 aa23.04■■□□□ 1.28
RNF139-201ENST00000303545 EIF4A1P60842 406 aaKnown RBP23.04■■□□□ 1.28
RNF139-201ENST00000303545 USP44Q9H0E7 712 aa23.04■■□□□ 1.28
RNF139-201ENST00000303545 GNAI3P08754 354 aa23.03■■□□□ 1.28
RNF139-201ENST00000303545 ZC3H6P61129 1189 aaKnown RBP23.03■■□□□ 1.28
RNF139-201ENST00000303545 ANKRD24Q8TF21 1146 aa23.03■■□□□ 1.28
RNF139-201ENST00000303545 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
RNF139-201ENST00000303545 PDE1AP54750 535 aa23.03■■□□□ 1.28
RNF139-201ENST00000303545 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
RNF139-201ENST00000303545 KRT28Q7Z3Y7 464 aa23.02■■□□□ 1.28
RNF139-201ENST00000303545 ARHGEF25Q86VW2 580 aa23.02■■□□□ 1.28
RNF139-201ENST00000303545 USP26Q9BXU7 913 aa23.02■■□□□ 1.28
RNF139-201ENST00000303545 UBTFL1P0CB47 393 aaPredicted RBP23.01■■□□□ 1.27
RNF139-201ENST00000303545 ATP8B2P98198 1209 aa23.01■■□□□ 1.27
RNF139-201ENST00000303545 ADAMTSL3P82987 1691 aa23.01■■□□□ 1.27
RNF139-201ENST00000303545 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
RNF139-201ENST00000303545 IL1RAPL2Q9NP60 686 aa23■■□□□ 1.27
RNF139-201ENST00000303545 PXDNQ92626 1479 aa23■■□□□ 1.27
RNF139-201ENST00000303545 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
RNF139-201ENST00000303545 K7ELQ4 463 aaPredicted RBP23■■□□□ 1.27
RNF139-201ENST00000303545 PLEKHO1Q53GL0 409 aaPredicted RBP23■■□□□ 1.27
RNF139-201ENST00000303545 AKAP4Q5JQC9 854 aa22.99■■□□□ 1.27
RNF139-201ENST00000303545 NCOA3Q9Y6Q9 1424 aa22.99■■□□□ 1.27
RNF139-201ENST00000303545 PI4KAP2A4QPH2 592 aa22.98■■□□□ 1.27
RNF139-201ENST00000303545 PI4KAP1Q8N8J0 262 aa22.98■■□□□ 1.27
RNF139-201ENST00000303545 DDIT3P35638 169 aa22.98■■□□□ 1.27
RNF139-201ENST00000303545 C1orf141Q5JVX7 400 aa22.98■■□□□ 1.27
RNF139-201ENST00000303545 CASC1Q6TDU7 716 aa22.98■■□□□ 1.27
RNF139-201ENST00000303545 BABAM1Q9NWV8 329 aa22.97■■□□□ 1.27
RNF139-201ENST00000303545 NBPF7P0C2Y1 421 aaPredicted RBP22.97■■□□□ 1.27
RNF139-201ENST00000303545 RILPL2Q969X0 211 aa22.97■■□□□ 1.27
RNF139-201ENST00000303545 RNMTO43148 476 aaKnown RBP22.96■■□□□ 1.27
RNF139-201ENST00000303545 TNPO1Q92973 898 aaKnown RBP22.96■■□□□ 1.27
RNF139-201ENST00000303545 SRCIN1Q9C0H9 1055 aa22.96■■□□□ 1.27
RNF139-201ENST00000303545 TRIM6-TRIM34B2RNG4 842 aa22.96■■□□□ 1.27
RNF139-201ENST00000303545 NUTM1Q86Y26 1132 aa22.95■■□□□ 1.27
RNF139-201ENST00000303545 MX1P20591 662 aa22.95■■□□□ 1.26
RNF139-201ENST00000303545 PROSER3Q2NL68 480 aa22.95■■□□□ 1.26
RNF139-201ENST00000303545 PPP1R42Q7Z4L9 355 aa22.95■■□□□ 1.26
RNF139-201ENST00000303545 CACNA1FO60840 1977 aa22.94■■□□□ 1.26
RNF139-201ENST00000303545 MAP4K4O95819 1239 aaPredicted RBP22.94■■□□□ 1.26
RNF139-201ENST00000303545 CABLES1Q8TDN4 633 aa22.94■■□□□ 1.26
RNF139-201ENST00000303545 IBTKQ9P2D0 1353 aaPredicted RBP22.93■■□□□ 1.26
RNF139-201ENST00000303545 AK9Q5TCS8 1911 aa22.93■■□□□ 1.26
RNF139-201ENST00000303545 SURF6O75683 361 aaKnown RBP22.93■■□□□ 1.26
RNF139-201ENST00000303545 RGPD5Q99666 1765 aa22.93■■□□□ 1.26
RNF139-201ENST00000303545 TRAK2O60296 914 aa22.93■■□□□ 1.26
RNF139-201ENST00000303545 UNC5CLQ8IV45 518 aa22.93■■□□□ 1.26
RNF139-201ENST00000303545 DNAAF4Q8WXU2 420 aa22.93■■□□□ 1.26
RNF139-201ENST00000303545 OSBPL3Q9H4L5 887 aa22.92■■□□□ 1.26
RNF139-201ENST00000303545 ERC2O15083 957 aa22.92■■□□□ 1.26
RNF139-201ENST00000303545 SRGAP3O43295 1099 aa22.92■■□□□ 1.26
RNF139-201ENST00000303545 SALL3Q9BXA9 1300 aa22.92■■□□□ 1.26
RNF139-201ENST00000303545 SOS1Q07889 1333 aaPredicted RBP22.91■■□□□ 1.26
RNF139-201ENST00000303545 RABEP1Q15276 862 aa22.91■■□□□ 1.26
RNF139-201ENST00000303545 AMOTQ4VCS5 1084 aa22.91■■□□□ 1.26
RNF139-201ENST00000303545 BEND3Q5T5X7 828 aa22.91■■□□□ 1.26
RNF139-201ENST00000303545 SSFA2P28290 1259 aa22.9■■□□□ 1.26
RNF139-201ENST00000303545 NLRP2Q9NX02 1062 aa22.9■■□□□ 1.26
RNF139-201ENST00000303545 KDM3BQ7LBC6 1761 aa22.9■■□□□ 1.26
RNF139-201ENST00000303545 MED1Q15648 1581 aaPredicted RBP22.9■■□□□ 1.26
RNF139-201ENST00000303545 C1orf167Q5SNV9 1468 aa22.9■■□□□ 1.26
RNF139-201ENST00000303545 SLC39A6Q13433 755 aa22.9■■□□□ 1.26
RNF139-201ENST00000303545 C19orf44Q9H6X5 657 aa22.89■■□□□ 1.26
RNF139-201ENST00000303545 REC8O95072 547 aa22.89■■□□□ 1.25
RNF139-201ENST00000303545 AIMP1Q12904 312 aaKnown RBP22.89■■□□□ 1.25
RNF139-201ENST00000303545 LMO7Q8WWI1 1683 aa22.89■■□□□ 1.25
RNF139-201ENST00000303545 ADCY9O60503 1353 aa22.88■■□□□ 1.25
RNF139-201ENST00000303545 RAB3GAP1Q15042 981 aa22.88■■□□□ 1.25
RNF139-201ENST00000303545 SSH3Q8TE77 659 aa22.88■■□□□ 1.25
RNF139-201ENST00000303545 MAP3K2Q9Y2U5 619 aa22.88■■□□□ 1.25
RNF139-201ENST00000303545 SLIT3O75094 1523 aa22.88■■□□□ 1.25
RNF139-201ENST00000303545 GIGYF1O75420 1035 aaPredicted RBP22.87■■□□□ 1.25
RNF139-201ENST00000303545 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
RNF139-201ENST00000303545 CWF19L2Q2TBE0 894 aaKnown RBP22.87■■□□□ 1.25
RNF139-201ENST00000303545 PXDNLA1KZ92 1463 aa22.87■■□□□ 1.25
RNF139-201ENST00000303545 ATF3P18847 181 aa22.86■■□□□ 1.25
RNF139-201ENST00000303545 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
RNF139-201ENST00000303545 ESYT1Q9BSJ8 1104 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms