RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RNMTO43148 476 aaKnown RBP24.38■■□□□ 1.49
HOXC4-201ENST00000303406 TEFQ10587 303 aa24.38■■□□□ 1.49
HOXC4-201ENST00000303406 BRINP3Q76B58 766 aa24.38■■□□□ 1.49
HOXC4-201ENST00000303406 ANKRD44Q8N8A2 993 aa24.38■■□□□ 1.49
HOXC4-201ENST00000303406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.38■■□□□ 1.49
HOXC4-201ENST00000303406 EIF4A1P60842 406 aaKnown RBP24.37■■□□□ 1.49
HOXC4-201ENST00000303406 ZC3H6P61129 1189 aaKnown RBP24.37■■□□□ 1.49
HOXC4-201ENST00000303406 G2E3Q7L622 706 aa24.37■■□□□ 1.49
HOXC4-201ENST00000303406 C1orf115Q9H7X2 142 aa24.37■■□□□ 1.49
HOXC4-201ENST00000303406 LGR6Q9HBX8 967 aa24.37■■□□□ 1.49
HOXC4-201ENST00000303406 FLIIQ13045 1269 aa24.36■■□□□ 1.49
HOXC4-201ENST00000303406 DDX17Q92841 729 aaKnown RBP24.35■■□□□ 1.49
HOXC4-201ENST00000303406 SOS2Q07890 1332 aaPredicted RBP24.35■■□□□ 1.49
HOXC4-201ENST00000303406 DCTPP1Q9H773 170 aa24.35■■□□□ 1.49
HOXC4-201ENST00000303406 HDGFL1Q5TGJ6 251 aa24.33■■□□□ 1.49
HOXC4-201ENST00000303406 POTEDQ86YR6 584 aa24.33■■□□□ 1.49
HOXC4-201ENST00000303406 PKD1L3Q7Z443 1732 aa24.32■■□□□ 1.48
HOXC4-201ENST00000303406 CEP85Q6P2H3 762 aa24.32■■□□□ 1.48
HOXC4-201ENST00000303406 RAPGEF4Q8WZA2 1011 aa24.32■■□□□ 1.48
HOXC4-201ENST00000303406 HEG1Q9ULI3 1381 aa24.32■■□□□ 1.48
HOXC4-201ENST00000303406 BTBD11A6QL63 1104 aa24.31■■□□□ 1.48
HOXC4-201ENST00000303406 TATP17735 454 aaPredicted RBP24.31■■□□□ 1.48
HOXC4-201ENST00000303406 MPRIPQ6WCQ1 1025 aa24.31■■□□□ 1.48
HOXC4-201ENST00000303406 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
HOXC4-201ENST00000303406 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
HOXC4-201ENST00000303406 ANKRD45Q5TZF3 282 aa24.3■■□□□ 1.48
HOXC4-201ENST00000303406 LNPKQ9C0E8 428 aa24.3■■□□□ 1.48
HOXC4-201ENST00000303406 SLAIN2Q9P270 581 aa24.3■■□□□ 1.48
HOXC4-201ENST00000303406 NHSL1Q5SYE7 1610 aa24.3■■□□□ 1.48
HOXC4-201ENST00000303406 MEIS3Q99687 375 aa24.3■■□□□ 1.48
HOXC4-201ENST00000303406 UPF2Q9HAU5 1272 aaKnown RBP24.3■■□□□ 1.48
HOXC4-201ENST00000303406 SPG7Q9UQ90 795 aa24.3■■□□□ 1.48
HOXC4-201ENST00000303406 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
HOXC4-201ENST00000303406 FKBP5Q13451 457 aaPredicted RBP24.29■■□□□ 1.48
HOXC4-201ENST00000303406 NLRP2Q9NX02 1062 aa24.29■■□□□ 1.48
HOXC4-201ENST00000303406 HMMRO75330 724 aa24.28■■□□□ 1.48
HOXC4-201ENST00000303406 GNAI3P08754 354 aa24.28■■□□□ 1.48
HOXC4-201ENST00000303406 BMP2KLQ5H9B9 411 aa24.28■■□□□ 1.48
HOXC4-201ENST00000303406 ABCA3Q99758 1704 aa24.27■■□□□ 1.48
HOXC4-201ENST00000303406 MEGF6O75095 1541 aa24.27■■□□□ 1.48
HOXC4-201ENST00000303406 MRC1P22897 1456 aa24.27■■□□□ 1.48
HOXC4-201ENST00000303406 F6X3S4 739 aa24.26■■□□□ 1.47
HOXC4-201ENST00000303406 SEC24BO95487 1268 aa24.26■■□□□ 1.47
HOXC4-201ENST00000303406 MYT1Q01538 1121 aa24.26■■□□□ 1.47
HOXC4-201ENST00000303406 GNAI2P04899 355 aa24.25■■□□□ 1.47
HOXC4-201ENST00000303406 SLC4A10Q6U841 1118 aa24.25■■□□□ 1.47
HOXC4-201ENST00000303406 CABLES1Q8TDN4 633 aa24.25■■□□□ 1.47
HOXC4-201ENST00000303406 PARP4Q9UKK3 1724 aaKnown RBP24.25■■□□□ 1.47
HOXC4-201ENST00000303406 CSB-PGBD3P0DP91 1061 aa24.25■■□□□ 1.47
HOXC4-201ENST00000303406 PHKG2P15735 406 aa24.24■■□□□ 1.47
HOXC4-201ENST00000303406 TBC1D32Q96NH3 1257 aa24.24■■□□□ 1.47
HOXC4-201ENST00000303406 KDM6AO15550 1401 aaPredicted RBP24.23■■□□□ 1.47
HOXC4-201ENST00000303406 KCNQ3O43525 872 aa24.23■■□□□ 1.47
HOXC4-201ENST00000303406 IFNL2Q8IZJ0 200 aa24.23■■□□□ 1.47
HOXC4-201ENST00000303406 HSP90AB1P08238 724 aaKnown RBP24.22■■□□□ 1.47
HOXC4-201ENST00000303406 GIGYF1O75420 1035 aaPredicted RBP24.21■■□□□ 1.47
HOXC4-201ENST00000303406 NECTIN2Q92692 538 aa24.21■■□□□ 1.47
HOXC4-201ENST00000303406 DBF4Q9UBU7 674 aaPredicted RBP24.21■■□□□ 1.47
HOXC4-201ENST00000303406 CHRNA2Q15822 529 aa24.2■■□□□ 1.47
HOXC4-201ENST00000303406 SLC52A2Q9HAB3 445 aa24.2■■□□□ 1.47
HOXC4-201ENST00000303406 WDR17Q8IZU2 1322 aa24.2■■□□□ 1.46
HOXC4-201ENST00000303406 EIF5BO60841 1220 aaKnown RBP24.2■■□□□ 1.46
HOXC4-201ENST00000303406 DCAF5Q96JK2 942 aa24.19■■□□□ 1.46
HOXC4-201ENST00000303406 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
HOXC4-201ENST00000303406 EIF2S2P20042 333 aaKnown RBP24.18■■□□□ 1.46
HOXC4-201ENST00000303406 PHAXQ9H814 394 aaKnown RBP24.18■■□□□ 1.46
HOXC4-201ENST00000303406 COL5A2P05997 1499 aaPredicted RBP24.17■■□□□ 1.46
HOXC4-201ENST00000303406 DAXXQ9UER7 740 aaPredicted RBP24.17■■□□□ 1.46
HOXC4-201ENST00000303406 IBTKQ9P2D0 1353 aaPredicted RBP24.16■■□□□ 1.46
HOXC4-201ENST00000303406 ATP8B2P98198 1209 aa24.16■■□□□ 1.46
HOXC4-201ENST00000303406 SRCIN1Q9C0H9 1055 aa24.16■■□□□ 1.46
HOXC4-201ENST00000303406 PRDM11Q9NQV5 511 aa24.16■■□□□ 1.46
HOXC4-201ENST00000303406 PLEKHM2Q8IWE5 1019 aa24.15■■□□□ 1.46
HOXC4-201ENST00000303406 DNAAF4Q8WXU2 420 aa24.15■■□□□ 1.46
HOXC4-201ENST00000303406 ZNF790Q6PG37 636 aa24.15■■□□□ 1.46
HOXC4-201ENST00000303406 USP44Q9H0E7 712 aa24.15■■□□□ 1.46
HOXC4-201ENST00000303406 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
HOXC4-201ENST00000303406 UBTFL1P0CB47 393 aaPredicted RBP24.13■■□□□ 1.45
HOXC4-201ENST00000303406 BECN1Q14457 450 aa24.13■■□□□ 1.45
HOXC4-201ENST00000303406 BEND3Q5T5X7 828 aa24.13■■□□□ 1.45
HOXC4-201ENST00000303406 ADCY9O60503 1353 aa24.13■■□□□ 1.45
HOXC4-201ENST00000303406 CYP27B1O15528 508 aa24.12■■□□□ 1.45
HOXC4-201ENST00000303406 ALDH1L1O75891 902 aa24.11■■□□□ 1.45
HOXC4-201ENST00000303406 CARD10Q9BWT7 1032 aa24.11■■□□□ 1.45
HOXC4-201ENST00000303406 C22orf23Q9BZE7 217 aa24.11■■□□□ 1.45
HOXC4-201ENST00000303406 DDX21Q9NR30 783 aaKnown RBP eCLIP24.11■■□□□ 1.45
HOXC4-201ENST00000303406 C5P01031 1676 aa24.11■■□□□ 1.45
HOXC4-201ENST00000303406 TTC22Q5TAA0 569 aa24.1■■□□□ 1.45
HOXC4-201ENST00000303406 PI4KAP2A4QPH2 592 aa24.1■■□□□ 1.45
HOXC4-201ENST00000303406 KSR2Q6VAB6 950 aa24.1■■□□□ 1.45
HOXC4-201ENST00000303406 PI4KAP1Q8N8J0 262 aa24.1■■□□□ 1.45
HOXC4-201ENST00000303406 OSBPL3Q9H4L5 887 aa24.1■■□□□ 1.45
HOXC4-201ENST00000303406 PCDH11XQ9BZA7 1347 aa24.1■■□□□ 1.45
HOXC4-201ENST00000303406 PCDH11YQ9BZA8 1340 aa24.1■■□□□ 1.45
HOXC4-201ENST00000303406 CDC45O75419 566 aa24.09■■□□□ 1.45
HOXC4-201ENST00000303406 HDAC5Q9UQL6 1122 aa24.09■■□□□ 1.45
HOXC4-201ENST00000303406 LRRFIP2Q9Y608 721 aaKnown RBP24.09■■□□□ 1.45
HOXC4-201ENST00000303406 MFAP1P55081 439 aaKnown RBP24.08■■□□□ 1.45
HOXC4-201ENST00000303406 SSH3Q8TE77 659 aa24.08■■□□□ 1.45
HOXC4-201ENST00000303406 DDX58O95786 925 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms