RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 EZRP15311 586 aaKnown RBP14.43□□□□□ -0.1
ABCA3-201ENST00000301732 ADCY5O95622 1261 aa14.43□□□□□ -0.1
ABCA3-201ENST00000301732 SLC3A2P08195 630 aaKnown RBP14.43□□□□□ -0.1
ABCA3-201ENST00000301732 DACH1Q9UI36 760 aa14.43□□□□□ -0.1
ABCA3-201ENST00000301732 FAM170AA1A519 330 aa14.43□□□□□ -0.1
ABCA3-201ENST00000301732 POLR3DP05423 398 aaPredicted RBP14.43□□□□□ -0.1
ABCA3-201ENST00000301732 TDRD12Q587J7 1177 aaKnown RBP14.43□□□□□ -0.1
ABCA3-201ENST00000301732 SPECC1Q5M775 1068 aa14.43□□□□□ -0.1
ABCA3-201ENST00000301732 JAKMIP3Q5VZ66 844 aa14.43□□□□□ -0.1
ABCA3-201ENST00000301732 ECM2O94769 699 aaPredicted RBP14.42□□□□□ -0.1
ABCA3-201ENST00000301732 USHBP1Q8N6Y0 703 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 LRP2BPQ9P2M1 347 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 TOP1P11387 765 aaKnown RBP14.42□□□□□ -0.1
ABCA3-201ENST00000301732 MPHOSPH8Q99549 860 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
ABCA3-201ENST00000301732 JPH4Q96JJ6 628 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 CEP63Q96MT8 703 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 CABP1Q9NZU7 370 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 GIMAP6Q6P9H5 292 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 ANKRD18AQ8IVF6 992 aa14.42□□□□□ -0.1
ABCA3-201ENST00000301732 USP8P40818 1118 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 CACNA2D4Q7Z3S7 1137 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 MAATS1Q7Z4T9 603 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 DTNBO60941 627 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.41□□□□□ -0.1
ABCA3-201ENST00000301732 CABP4P57796 275 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 TMCO4Q5TGY1 634 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 KIF18AQ8NI77 898 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 PAIP2Q9BPZ3 127 aaKnown RBP14.41□□□□□ -0.1
ABCA3-201ENST00000301732 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 SRCIN1Q9C0H9 1055 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 SF3A3Q12874 501 aaKnown RBP eCLIP14.41□□□□□ -0.1
ABCA3-201ENST00000301732 DNAJC21Q5F1R6 531 aaKnown RBP14.41□□□□□ -0.1
ABCA3-201ENST00000301732 INCENPQ9NQS7 918 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 ATF3P18847 181 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 MYO1BO43795 1136 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 SPA17Q15506 151 aa14.41□□□□□ -0.1
ABCA3-201ENST00000301732 KIF5CO60282 957 aa14.4□□□□□ -0.1
ABCA3-201ENST00000301732 FAM160A1Q05DH4 1040 aa14.4□□□□□ -0.1
ABCA3-201ENST00000301732 CTR9Q6PD62 1173 aa14.4□□□□□ -0.1
ABCA3-201ENST00000301732 LUC7LQ9NQ29 371 aaKnown RBP14.4□□□□□ -0.1
ABCA3-201ENST00000301732 NOL7Q9UMY1 257 aaKnown RBP14.4□□□□□ -0.1
ABCA3-201ENST00000301732 HIP1O00291 1037 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 ANAPC15P60006 121 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 HAND2P61296 217 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 SMC1AQ14683 1233 aaKnown RBP14.39□□□□□ -0.11
ABCA3-201ENST00000301732 TCEANC2Q96MN5 208 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 NBPF8Q3BBV2 869 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
ABCA3-201ENST00000301732 PIP4K2AP48426 406 aaPredicted RBP14.39□□□□□ -0.11
ABCA3-201ENST00000301732 MNAT1P51948 309 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 ANKRD1Q15327 319 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 VAT1LQ9HCJ6 419 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 PTCD1O75127 700 aaKnown RBP14.39□□□□□ -0.11
ABCA3-201ENST00000301732 RSPH14Q9UHP6 348 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 WDR78Q5VTH9 848 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 LRRC2Q9BYS8 371 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 RABEP2Q9H5N1 569 aa14.39□□□□□ -0.11
ABCA3-201ENST00000301732 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
ABCA3-201ENST00000301732 NACAP1Q9BZK3 213 aa14.38□□□□□ -0.11
ABCA3-201ENST00000301732 ZNF530Q6P9A1 599 aaPredicted RBP14.38□□□□□ -0.11
ABCA3-201ENST00000301732 SMTNL1A8MU46 457 aa14.38□□□□□ -0.11
ABCA3-201ENST00000301732 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
ABCA3-201ENST00000301732 HCLS1P14317 486 aaPredicted RBP14.38□□□□□ -0.11
ABCA3-201ENST00000301732 MCM6Q14566 821 aa14.38□□□□□ -0.11
ABCA3-201ENST00000301732 SMIM23A6NLE4 172 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 BTBD11A6QL63 1104 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 PHACTR2O75167 634 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 RGS22Q8NE09 1264 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 SMARCC1Q92922 1105 aaPredicted RBP14.37□□□□□ -0.11
ABCA3-201ENST00000301732 JADE2Q9NQC1 790 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 PTGS1P23219 599 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 ERC1Q8IUD2 1116 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 BRD4O60885 1362 aaPredicted RBP14.37□□□□□ -0.11
ABCA3-201ENST00000301732 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 FSIP1Q8NA03 581 aa14.37□□□□□ -0.11
ABCA3-201ENST00000301732 ZNF397Q8NF99 534 aaPredicted RBP14.37□□□□□ -0.11
ABCA3-201ENST00000301732 NOP2P46087 812 aaKnown RBP14.36□□□□□ -0.11
ABCA3-201ENST00000301732 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
ABCA3-201ENST00000301732 PDE3AQ14432 1141 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 IQCEQ6IPM2 695 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 SLC26A8Q96RN1 970 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 UACAQ9BZF9 1416 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 TCERG1LQ5VWI1 586 aa14.36□□□□□ -0.11
ABCA3-201ENST00000301732 BMP2KQ9NSY1 1161 aaPredicted RBP14.36□□□□□ -0.11
ABCA3-201ENST00000301732 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
ABCA3-201ENST00000301732 CDK19Q9BWU1 502 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 SCLT1Q96NL6 688 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 SNRKQ9NRH2 765 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 GJB2P29033 226 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 CNNM3Q8NE01 707 aa14.35□□□□□ -0.11
ABCA3-201ENST00000301732 ZC3H6P61129 1189 aaKnown RBP14.35□□□□□ -0.11
ABCA3-201ENST00000301732 GPIHBP1Q8IV16 184 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms