RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
SNAPC4-201ENST00000298532 SCAND2PQ9GZW5 306 aaPredicted RBP19.37■□□□□ 0.69
SNAPC4-201ENST00000298532 SULT6B1Q6IMI4 303 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 GBP3Q9H0R5 595 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 ALDH1L2Q3SY69 923 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 HSP90AB3PQ58FF7 597 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 PRIMPOLQ96LW4 560 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 LUC7LQ9NQ29 371 aaKnown RBP19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 RAD21O60216 631 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 BAG4O95429 457 aaKnown RBP19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 CCDC181Q5TID7 509 aa19.36■□□□□ 0.69
SNAPC4-201ENST00000298532 XRCC6P12956 609 aaKnown RBP eCLIP19.35■□□□□ 0.69
SNAPC4-201ENST00000298532 IQCEQ6IPM2 695 aa19.35■□□□□ 0.69
SNAPC4-201ENST00000298532 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
SNAPC4-201ENST00000298532 HSP90AB2PQ58FF8 381 aa19.35■□□□□ 0.69
SNAPC4-201ENST00000298532 TXLNBQ8N3L3 684 aa19.35■□□□□ 0.69
SNAPC4-201ENST00000298532 CAMK4Q16566 473 aa19.35■□□□□ 0.69
SNAPC4-201ENST00000298532 CASTP20810 708 aaKnown RBP19.35■□□□□ 0.69
SNAPC4-201ENST00000298532 ERLIN2O94905 339 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 TNNT1P13805 278 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 SRGAP3O43295 1099 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 TRIM22Q8IYM9 498 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 CEP170Q5SW79 1584 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 ZSCAN12O43309 604 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 KIF6Q6ZMV9 814 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 IL1RAPL2Q9NP60 686 aa19.34■□□□□ 0.69
SNAPC4-201ENST00000298532 NEMFO60524 1076 aa19.33■□□□□ 0.69
SNAPC4-201ENST00000298532 CABP4P57796 275 aa19.33■□□□□ 0.69
SNAPC4-201ENST00000298532 RBM33Q96EV2 1170 aaKnown RBP19.33■□□□□ 0.69
SNAPC4-201ENST00000298532 ANO10Q9NW15 660 aa19.33■□□□□ 0.69
SNAPC4-201ENST00000298532 STIM1Q13586 685 aa19.33■□□□□ 0.69
SNAPC4-201ENST00000298532 NFE2L2Q16236 605 aa19.33■□□□□ 0.69
SNAPC4-201ENST00000298532 GOLGA6L7A0A1B0GV03 622 aa19.33■□□□□ 0.68
SNAPC4-201ENST00000298532 PPP4R3BQ5MIZ7 849 aa19.33■□□□□ 0.68
SNAPC4-201ENST00000298532 FERMT3Q86UX7 667 aa19.33■□□□□ 0.68
SNAPC4-201ENST00000298532 CFAP100Q494V2 611 aa19.33■□□□□ 0.68
SNAPC4-201ENST00000298532 ABCC11Q96J66 1382 aa19.33■□□□□ 0.68
SNAPC4-201ENST00000298532 MX1P20591 662 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 UVSSAQ2YD98 709 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 ODF2Q5BJF6 829 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 BMP2KLQ5H9B9 411 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 ARHGAP29Q52LW3 1261 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 CCDC83Q8IWF9 413 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 SH2B1Q9NRF2 756 aaPredicted RBP19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 ABCA5Q8WWZ7 1642 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 CLIP2Q9UDT6 1046 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 AACSQ86V21 672 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 TRIM34Q9BYJ4 488 aa19.32■□□□□ 0.68
SNAPC4-201ENST00000298532 ZNF530Q6P9A1 599 aaPredicted RBP19.31■□□□□ 0.68
SNAPC4-201ENST00000298532 CDKL5O76039 1030 aa19.31■□□□□ 0.68
SNAPC4-201ENST00000298532 CCDC158Q5M9N0 1113 aa19.31■□□□□ 0.68
SNAPC4-201ENST00000298532 CCDC43Q96MW1 224 aaKnown RBP19.31■□□□□ 0.68
SNAPC4-201ENST00000298532 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
SNAPC4-201ENST00000298532 EXOC6BQ9Y2D4 811 aa19.31■□□□□ 0.68
SNAPC4-201ENST00000298532 EPB41L2O43491 1005 aaKnown RBP19.31■□□□□ 0.68
SNAPC4-201ENST00000298532 ZHX1Q9UKY1 873 aaPredicted RBP19.3■□□□□ 0.68
SNAPC4-201ENST00000298532 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
SNAPC4-201ENST00000298532 ADCY5O95622 1261 aa19.3■□□□□ 0.68
SNAPC4-201ENST00000298532 C14orf93Q9H972 538 aaKnown RBP19.3■□□□□ 0.68
SNAPC4-201ENST00000298532 C16orf45Q96MC5 204 aaPredicted RBP19.3■□□□□ 0.68
SNAPC4-201ENST00000298532 SYCP2Q9BX26 1530 aa19.3■□□□□ 0.68
SNAPC4-201ENST00000298532 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.29■□□□□ 0.681e-6■■■■■ 29.5
SNAPC4-201ENST00000298532 NEO1Q92859 1461 aa19.29■□□□□ 0.68
SNAPC4-201ENST00000298532 FYB1O15117 783 aa19.29■□□□□ 0.68
SNAPC4-201ENST00000298532 IGHDP01880 384 aa19.29■□□□□ 0.68
SNAPC4-201ENST00000298532 FAM193AP78312 1265 aa19.29■□□□□ 0.68
SNAPC4-201ENST00000298532 CDK5RAP3Q96JB5 506 aa19.29■□□□□ 0.68
SNAPC4-201ENST00000298532 URI1O94763 535 aaPredicted RBP19.29■□□□□ 0.68
SNAPC4-201ENST00000298532 ATP10AO60312 1499 aa19.29■□□□□ 0.68
SNAPC4-201ENST00000298532 CRACR2AQ9BSW2 395 aa19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 SIL1Q9H173 461 aa19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 ZSCAN23Q3MJ62 389 aa19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 KLHL34Q8N239 644 aa19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 CTAGE5O15320 804 aa19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 CTNNA3Q9UI47 895 aa19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 WAPLQ7Z5K2 1190 aa19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 CCAR1Q8IX12 1150 aaKnown RBP19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 DDX19AQ9NUU7 478 aaKnown RBP19.28■□□□□ 0.68
SNAPC4-201ENST00000298532 TTC39AQ5SRH9 613 aa19.27■□□□□ 0.68
SNAPC4-201ENST00000298532 TBC1D9Q6ZT07 1266 aa19.27■□□□□ 0.68
SNAPC4-201ENST00000298532 GLRX3O76003 335 aaKnown RBP19.27■□□□□ 0.68
SNAPC4-201ENST00000298532 DDX54Q8TDD1 881 aaKnown RBP19.27■□□□□ 0.68
SNAPC4-201ENST00000298532 KIF1BPQ96EK5 621 aa19.27■□□□□ 0.68
SNAPC4-201ENST00000298532 LIMCH1Q9UPQ0 1083 aa19.27■□□□□ 0.68
SNAPC4-201ENST00000298532 UBAP1LF5GYI3 381 aa19.27■□□□□ 0.67
SNAPC4-201ENST00000298532 CCDC148Q8NFR7 591 aa19.27■□□□□ 0.67
SNAPC4-201ENST00000298532 DDX11Q96FC9 970 aa19.27■□□□□ 0.67
SNAPC4-201ENST00000298532 NOS1P29475 1434 aa19.27■□□□□ 0.67
SNAPC4-201ENST00000298532 LRSAM1Q6UWE0 723 aa19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 NGLY1Q96IV0 654 aa19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 PANK2Q9BZ23 570 aa19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 LRRFIP2Q9Y608 721 aaKnown RBP19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 TRIM27P14373 513 aa19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 NUTM1Q86Y26 1132 aa19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 RAB11FIP3O75154 756 aa19.26■□□□□ 0.67
SNAPC4-201ENST00000298532 GSDMDP57764 484 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 641.3 ms