RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 COL3A1P02461 1466 aaPredicted RBP8.07□□□□□ -1.12
SSX3-201ENST00000298396 COL5A2P05997 1499 aaPredicted RBP8.07□□□□□ -1.12
SSX3-201ENST00000298396 SHANK3Q9BYB0 1731 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 GLI3P10071 1580 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 ADAMTS2O95450 1211 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 ZC3H6P61129 1189 aaKnown RBP8.07□□□□□ -1.12
SSX3-201ENST00000298396 RRS1Q15050 365 aaKnown RBP8.07□□□□□ -1.12
SSX3-201ENST00000298396 CHRNA2Q15822 529 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 SMYD5Q6GMV2 418 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 COG3Q96JB2 828 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 AXIN2Q9Y2T1 843 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 AATKQ6ZMQ8 1374 aa8.07□□□□□ -1.12
SSX3-201ENST00000298396 MAP3K19Q56UN5 1328 aa8.06□□□□□ -1.12
SSX3-201ENST00000298396 ARSIQ5FYB1 569 aa8.06□□□□□ -1.12
SSX3-201ENST00000298396 RGS17Q9UGC6 210 aaPredicted RBP8.06□□□□□ -1.12
SSX3-201ENST00000298396 EMILIN1Q9Y6C2 1016 aa8.06□□□□□ -1.12
SSX3-201ENST00000298396 CDK12Q9NYV4 1490 aaPredicted RBP8.06□□□□□ -1.12
SSX3-201ENST00000298396 PHF14O94880 888 aa8.05□□□□□ -1.12
SSX3-201ENST00000298396 OSBPP22059 807 aa8.05□□□□□ -1.12
SSX3-201ENST00000298396 TNNT2P45379 298 aaPredicted RBP8.05□□□□□ -1.12
SSX3-201ENST00000298396 CNGB1Q14028 1251 aaPredicted RBP8.05□□□□□ -1.12
SSX3-201ENST00000298396 KCNH5Q8NCM2 988 aa8.05□□□□□ -1.12
SSX3-201ENST00000298396 C8orf37Q96NL8 207 aa8.05□□□□□ -1.12
SSX3-201ENST00000298396 PCDH10Q9P2E7 1040 aa8.05□□□□□ -1.12
SSX3-201ENST00000298396 POLKQ9UBT6 870 aa8.05□□□□□ -1.12
SSX3-201ENST00000298396 THSD7AQ9UPZ6 1657 aa8.05□□□□□ -1.12
SSX3-201ENST00000298396 AFF2P51816 1311 aa8.04□□□□□ -1.12
SSX3-201ENST00000298396 ATRNO75882 1429 aa8.04□□□□□ -1.12
SSX3-201ENST00000298396 FOSBP53539 338 aa8.04□□□□□ -1.12
SSX3-201ENST00000298396 MORC1Q86VD1 984 aa8.04□□□□□ -1.12
SSX3-201ENST00000298396 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
SSX3-201ENST00000298396 FNBP4Q8N3X1 1017 aaPredicted RBP8.04□□□□□ -1.12
SSX3-201ENST00000298396 KHSRPQ92945 711 aaKnown RBP eCLIP8.04□□□□□ -1.129e-8■□□□□ 8.2
SSX3-201ENST00000298396 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
SSX3-201ENST00000298396 RTL1A6NKG5 1358 aa8.04□□□□□ -1.12
SSX3-201ENST00000298396 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
SSX3-201ENST00000298396 FLT4P35916 1363 aa8.03□□□□□ -1.12
SSX3-201ENST00000298396 TULP1O00294 542 aaPredicted RBP8.03□□□□□ -1.12
SSX3-201ENST00000298396 NUDT7P0C024 238 aa8.03□□□□□ -1.12
SSX3-201ENST00000298396 HOXC9P31274 260 aa8.03□□□□□ -1.12
SSX3-201ENST00000298396 PRIM1P49642 420 aaKnown RBP8.03□□□□□ -1.12
SSX3-201ENST00000298396 IP6K1Q92551 441 aa8.03□□□□□ -1.12
SSX3-201ENST00000298396 EPAS1Q99814 870 aa8.03□□□□□ -1.12
SSX3-201ENST00000298396 DLG5Q8TDM6 1919 aa8.03□□□□□ -1.12
SSX3-201ENST00000298396 BLMP54132 1417 aaPredicted RBP8.03□□□□□ -1.12
SSX3-201ENST00000298396 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
SSX3-201ENST00000298396 INSRP06213 1382 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 KIF24Q5T7B8 1368 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 ZBTB7CA1YPR0 619 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 PPP2R1AP30153 589 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 MEX3CQ5U5Q3 659 aaKnown RBP8.02□□□□□ -1.13
SSX3-201ENST00000298396 PRKRIP1Q9H875 184 aaPredicted RBP8.02□□□□□ -1.13
SSX3-201ENST00000298396 BTG4Q9NY30 223 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 PCDHGA10Q9Y5H3 936 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 PKD1L3Q7Z443 1732 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 LRRC37A3O60309 1634 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 ERBB3P21860 1342 aa8.02□□□□□ -1.13
SSX3-201ENST00000298396 SBF2Q86WG5 1849 aa8.01□□□□□ -1.13
SSX3-201ENST00000298396 GPR37O15354 613 aa8.01□□□□□ -1.13
SSX3-201ENST00000298396 HSP90AB2PQ58FF8 381 aa8.01□□□□□ -1.13
SSX3-201ENST00000298396 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
SSX3-201ENST00000298396 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
SSX3-201ENST00000298396 UNC5CLQ8IV45 518 aa8.01□□□□□ -1.13
SSX3-201ENST00000298396 NGLY1Q96IV0 654 aa8.01□□□□□ -1.13
SSX3-201ENST00000298396 KAT6BQ8WYB5 2073 aa8.01□□□□□ -1.13
SSX3-201ENST00000298396 PSDA5PKW4 1024 aaPredicted RBP8□□□□□ -1.13
SSX3-201ENST00000298396 MTHFSP49914 203 aa8□□□□□ -1.13
SSX3-201ENST00000298396 EN1Q05925 392 aaPredicted RBP8□□□□□ -1.13
SSX3-201ENST00000298396 LARP1Q6PKG0 1096 aaKnown RBP8□□□□□ -1.13
SSX3-201ENST00000298396 DDX12PQ92771 950 aa8□□□□□ -1.13
SSX3-201ENST00000298396 FBXW7Q969H0 707 aa8□□□□□ -1.13
SSX3-201ENST00000298396 USP21Q9UK80 565 aa8□□□□□ -1.13
SSX3-201ENST00000298396 DISP2A7MBM2 1401 aa8□□□□□ -1.13
SSX3-201ENST00000298396 WDR17Q8IZU2 1322 aa8□□□□□ -1.13
SSX3-201ENST00000298396 ST18O60284 1047 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 AMPHP49418 695 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 CRB1P82279 1406 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 EIF4A2Q14240 407 aaKnown RBP7.99□□□□□ -1.13
SSX3-201ENST00000298396 RALBP1Q15311 655 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 VPS72Q15906 364 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 CCDC184Q52MB2 194 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 TYW1BQ6NUM6 668 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 ANKRD24Q8TF21 1146 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 STRN4Q9NRL3 753 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 LHX6Q9UPM6 363 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 SPATA31A5Q5VU36 1347 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 SPATA31A7Q8IWB4 1347 aa7.99□□□□□ -1.13
SSX3-201ENST00000298396 MYBBP1AQ9BQG0 1328 aaKnown RBP7.99□□□□□ -1.13
SSX3-201ENST00000298396 MEGF6O75095 1541 aa7.98□□□□□ -1.13
SSX3-201ENST00000298396 TOGARAM1Q9Y4F4 1720 aa7.98□□□□□ -1.13
SSX3-201ENST00000298396 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
SSX3-201ENST00000298396 PPM1GO15355 546 aaPredicted RBP7.98□□□□□ -1.13
SSX3-201ENST00000298396 IL13P35225 146 aa7.98□□□□□ -1.13
SSX3-201ENST00000298396 RBM26Q5T8P6 1007 aaKnown RBP7.98□□□□□ -1.13
SSX3-201ENST00000298396 LTV1Q96GA3 475 aaPredicted RBP7.98□□□□□ -1.13
SSX3-201ENST00000298396 ITGB4P16144 1822 aa7.98□□□□□ -1.13
SSX3-201ENST00000298396 SPATA31A1Q5TZJ5 1347 aa7.98□□□□□ -1.13
SSX3-201ENST00000298396 EP400Q96L91 3159 aa7.98□□□□□ -1.13
SSX3-201ENST00000298396 RGS12O14924 1447 aa7.97□□□□□ -1.13
SSX3-201ENST00000298396 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms