RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 COL14A1Q05707 1796 aaKnown RBP33.18■■■□□ 2.9
PHOX2A-201ENST00000298231 CEMIPQ8WUJ3 1361 aa33.18■■■□□ 2.9
PHOX2A-201ENST00000298231 KRT24Q2M2I5 525 aa33.18■■■□□ 2.9
PHOX2A-201ENST00000298231 ARHGEF25Q86VW2 580 aa33.18■■■□□ 2.9
PHOX2A-201ENST00000298231 N4BP2Q86UW6 1770 aaPredicted RBP33.18■■■□□ 2.9
PHOX2A-201ENST00000298231 PLCH1Q4KWH8 1693 aa33.18■■■□□ 2.9
PHOX2A-201ENST00000298231 CPDO75976 1380 aa33.17■■■□□ 2.9
PHOX2A-201ENST00000298231 LTV1Q96GA3 475 aaPredicted RBP33.17■■■□□ 2.9
PHOX2A-201ENST00000298231 NWD2Q9ULI1 1742 aa33.17■■■□□ 2.9
PHOX2A-201ENST00000298231 BCL9LQ86UU0 1499 aa33.17■■■□□ 2.9
PHOX2A-201ENST00000298231 POTEAQ6S8J7 498 aa33.17■■■□□ 2.9
PHOX2A-201ENST00000298231 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.16■■■□□ 2.9
PHOX2A-201ENST00000298231 ABCC6O95255 1503 aa33.15■■■□□ 2.9
PHOX2A-201ENST00000298231 CHD1LQ86WJ1 897 aa33.15■■■□□ 2.9
PHOX2A-201ENST00000298231 USP21Q9UK80 565 aa33.15■■■□□ 2.9
PHOX2A-201ENST00000298231 TAF7Q15545 349 aaPredicted RBP33.13■■■□□ 2.89
PHOX2A-201ENST00000298231 PRDM11Q9NQV5 511 aa33.13■■■□□ 2.89
PHOX2A-201ENST00000298231 KDM3BQ7LBC6 1761 aa33.13■■■□□ 2.89
PHOX2A-201ENST00000298231 STK31Q9BXU1 1019 aa33.13■■■□□ 2.89
PHOX2A-201ENST00000298231 RGPD2P0DJD1 1756 aa33.12■■■□□ 2.89
PHOX2A-201ENST00000298231 ZC3H6P61129 1189 aaKnown RBP33.12■■■□□ 2.89
PHOX2A-201ENST00000298231 NBPF6Q5VWK0 638 aa33.12■■■□□ 2.89
PHOX2A-201ENST00000298231 NBPF4Q96M43 638 aa33.12■■■□□ 2.89
PHOX2A-201ENST00000298231 PXDNLA1KZ92 1463 aa33.12■■■□□ 2.89
PHOX2A-201ENST00000298231 ATP10DQ9P241 1426 aa33.11■■■□□ 2.89
PHOX2A-201ENST00000298231 IL17REQ8NFR9 667 aa33.11■■■□□ 2.89
PHOX2A-201ENST00000298231 CHMP4AQ9BY43 222 aa33.11■■■□□ 2.89
PHOX2A-201ENST00000298231 DAXXQ9UER7 740 aaPredicted RBP33.11■■■□□ 2.89
PHOX2A-201ENST00000298231 SLC4A2P04920 1241 aa33.1■■■□□ 2.89
PHOX2A-201ENST00000298231 AMOTQ4VCS5 1084 aa33.1■■■□□ 2.89
PHOX2A-201ENST00000298231 CCDC30Q5VVM6 783 aa33.1■■■□□ 2.89
PHOX2A-201ENST00000298231 PLEKHG2Q9H7P9 1386 aa33.1■■■□□ 2.89
PHOX2A-201ENST00000298231 CCT4P50991 539 aaKnown RBP33.09■■■□□ 2.89
PHOX2A-201ENST00000298231 UNC5CLQ8IV45 518 aa33.09■■■□□ 2.89
PHOX2A-201ENST00000298231 RPAP2Q8IXW5 612 aaPredicted RBP33.09■■■□□ 2.89
PHOX2A-201ENST00000298231 NRAPQ86VF7 1730 aa33.09■■■□□ 2.89
PHOX2A-201ENST00000298231 ATRNO75882 1429 aa33.09■■■□□ 2.89
PHOX2A-201ENST00000298231 MIS18AQ9NYP9 233 aa33.08■■■□□ 2.89
PHOX2A-201ENST00000298231 HOXB7P09629 217 aa33.07■■■□□ 2.88
PHOX2A-201ENST00000298231 PLEKHO1Q53GL0 409 aaPredicted RBP33.07■■■□□ 2.88
PHOX2A-201ENST00000298231 SIRT2Q8IXJ6 389 aa33.07■■■□□ 2.88
PHOX2A-201ENST00000298231 USHBP1Q8N6Y0 703 aa33.07■■■□□ 2.88
PHOX2A-201ENST00000298231 C1orf115Q9H7X2 142 aa33.07■■■□□ 2.88
PHOX2A-201ENST00000298231 QTRT2Q9H974 415 aaKnown RBP33.07■■■□□ 2.88
PHOX2A-201ENST00000298231 TRPC5Q9UL62 973 aaPredicted RBP33.07■■■□□ 2.88
PHOX2A-201ENST00000298231 ANKRD44Q8N8A2 993 aa33.06■■■□□ 2.88
PHOX2A-201ENST00000298231 CHRNA2Q15822 529 aa33.05■■■□□ 2.88
PHOX2A-201ENST00000298231 AKAP4Q5JQC9 854 aa33.05■■■□□ 2.88
PHOX2A-201ENST00000298231 TBC1D32Q96NH3 1257 aa33.05■■■□□ 2.88
PHOX2A-201ENST00000298231 BTG4Q9NY30 223 aa33.04■■■□□ 2.88
PHOX2A-201ENST00000298231 BMP2KLQ5H9B9 411 aa33.04■■■□□ 2.88
PHOX2A-201ENST00000298231 SEC24BO95487 1268 aa33.03■■■□□ 2.88
PHOX2A-201ENST00000298231 LNPKQ9C0E8 428 aa33.03■■■□□ 2.88
PHOX2A-201ENST00000298231 ADAMTS7Q9UKP4 1686 aa33.03■■■□□ 2.88
PHOX2A-201ENST00000298231 ANKRD24Q8TF21 1146 aa33.01■■■□□ 2.88
PHOX2A-201ENST00000298231 DCTPP1Q9H773 170 aa33.01■■■□□ 2.88
PHOX2A-201ENST00000298231 COL18A1P39060 1754 aa33■■■□□ 2.87
PHOX2A-201ENST00000298231 ANKRD45Q5TZF3 282 aa33■■■□□ 2.87
PHOX2A-201ENST00000298231 RXRBP28702 533 aa32.99■■■□□ 2.87
PHOX2A-201ENST00000298231 RBM6P78332 1123 aaKnown RBP32.99■■■□□ 2.87
PHOX2A-201ENST00000298231 BECN1Q14457 450 aa32.98■■■□□ 2.87
PHOX2A-201ENST00000298231 VPS72Q15906 364 aa32.98■■■□□ 2.87
PHOX2A-201ENST00000298231 ZBTB7CA1YPR0 619 aa32.97■■■□□ 2.87
PHOX2A-201ENST00000298231 FLIIQ13045 1269 aa32.97■■■□□ 2.87
PHOX2A-201ENST00000298231 CEP85Q6P2H3 762 aa32.97■■■□□ 2.87
PHOX2A-201ENST00000298231 ZNF530Q6P9A1 599 aaPredicted RBP32.97■■■□□ 2.87
PHOX2A-201ENST00000298231 ERBB3P21860 1342 aa32.95■■■□□ 2.87
PHOX2A-201ENST00000298231 SOCS7O14512 581 aa32.95■■■□□ 2.87
PHOX2A-201ENST00000298231 EIF5BO60841 1220 aaKnown RBP32.95■■■□□ 2.87
PHOX2A-201ENST00000298231 HMMRO75330 724 aa32.95■■■□□ 2.87
PHOX2A-201ENST00000298231 G2E3Q7L622 706 aa32.94■■■□□ 2.86
PHOX2A-201ENST00000298231 GJD4Q96KN9 370 aaPredicted RBP32.94■■■□□ 2.86
PHOX2A-201ENST00000298231 SIPA1L3O60292 1781 aaPredicted RBP32.94■■■□□ 2.86
PHOX2A-201ENST00000298231 C1orf141Q5JVX7 400 aa32.94■■■□□ 2.86
PHOX2A-201ENST00000298231 RGPD5Q99666 1765 aa32.93■■■□□ 2.86
PHOX2A-201ENST00000298231 GLI3P10071 1580 aa32.93■■■□□ 2.86
PHOX2A-201ENST00000298231 MEIS3Q99687 375 aa32.93■■■□□ 2.86
PHOX2A-201ENST00000298231 USP35Q9P2H5 1018 aa32.93■■■□□ 2.86
PHOX2A-201ENST00000298231 COL5A2P05997 1499 aaPredicted RBP32.93■■■□□ 2.86
PHOX2A-201ENST00000298231 TEFQ10587 303 aa32.91■■■□□ 2.86
PHOX2A-201ENST00000298231 EIF4A1P60842 406 aaKnown RBP32.91■■■□□ 2.86
PHOX2A-201ENST00000298231 HDGFL1Q5TGJ6 251 aa32.91■■■□□ 2.86
PHOX2A-201ENST00000298231 GNAI3P08754 354 aa32.9■■■□□ 2.86
PHOX2A-201ENST00000298231 FKBP5Q13451 457 aaPredicted RBP32.9■■■□□ 2.86
PHOX2A-201ENST00000298231 RTL5Q5HYW3 569 aaPredicted RBP32.89■■■□□ 2.86
PHOX2A-201ENST00000298231 AXIN2Q9Y2T1 843 aa32.88■■■□□ 2.85
PHOX2A-201ENST00000298231 RNMTO43148 476 aaKnown RBP32.88■■■□□ 2.85
PHOX2A-201ENST00000298231 STRN4Q9NRL3 753 aa32.88■■■□□ 2.85
PHOX2A-201ENST00000298231 SPATA31A5Q5VU36 1347 aa32.87■■■□□ 2.85
PHOX2A-201ENST00000298231 SPATA31A7Q8IWB4 1347 aa32.87■■■□□ 2.85
PHOX2A-201ENST00000298231 GNAI2P04899 355 aa32.86■■■□□ 2.85
PHOX2A-201ENST00000298231 EVA1CP58658 441 aa32.86■■■□□ 2.85
PHOX2A-201ENST00000298231 SLC4A10Q6U841 1118 aa32.86■■■□□ 2.85
PHOX2A-201ENST00000298231 C22orf23Q9BZE7 217 aa32.85■■■□□ 2.85
PHOX2A-201ENST00000298231 LGR6Q9HBX8 967 aa32.85■■■□□ 2.85
PHOX2A-201ENST00000298231 CCDC9Q9Y3X0 531 aaKnown RBP32.85■■■□□ 2.85
PHOX2A-201ENST00000298231 F6X3S4 739 aa32.85■■■□□ 2.85
PHOX2A-201ENST00000298231 BTBD11A6QL63 1104 aa32.83■■■□□ 2.85
PHOX2A-201ENST00000298231 NBR1Q14596 966 aa32.83■■■□□ 2.85
PHOX2A-201ENST00000298231 MFAP1P55081 439 aaKnown RBP32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms