RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 NLGN2Q8NFZ4 835 aa23.61■■□□□ 1.37
TFF3-201ENST00000291525 ATG3Q9NT62 314 aa23.61■■□□□ 1.37
TFF3-201ENST00000291525 ZNF831Q5JPB2 1677 aa23.6■■□□□ 1.37
TFF3-201ENST00000291525 SULT6B1Q6IMI4 303 aa23.59■■□□□ 1.37
TFF3-201ENST00000291525 CD2APQ9Y5K6 639 aa23.59■■□□□ 1.37
TFF3-201ENST00000291525 KDRP35968 1356 aa23.58■■□□□ 1.37
TFF3-201ENST00000291525 GNPATO15228 680 aa23.58■■□□□ 1.37
TFF3-201ENST00000291525 CABP4P57796 275 aa23.58■■□□□ 1.37
TFF3-201ENST00000291525 ZNF784Q8NCA9 323 aaPredicted RBP23.58■■□□□ 1.37
TFF3-201ENST00000291525 GRIN3BO60391 1043 aa23.57■■□□□ 1.36
TFF3-201ENST00000291525 IL13P35225 146 aa23.57■■□□□ 1.36
TFF3-201ENST00000291525 MTHFSP49914 203 aa23.57■■□□□ 1.36
TFF3-201ENST00000291525 ITPK1Q13572 414 aa23.57■■□□□ 1.36
TFF3-201ENST00000291525 AEBP1Q8IUX7 1158 aa23.57■■□□□ 1.36
TFF3-201ENST00000291525 KDM6AO15550 1401 aaPredicted RBP23.57■■□□□ 1.36
TFF3-201ENST00000291525 RBM42Q9BTD8 480 aaKnown RBP23.56■■□□□ 1.36
TFF3-201ENST00000291525 AMIGO3Q86WK7 504 aa23.55■■□□□ 1.36
TFF3-201ENST00000291525 COL5A3P25940 1745 aaPredicted RBP23.53■■□□□ 1.36
TFF3-201ENST00000291525 UTRNP46939 3433 aa23.53■■□□□ 1.36
TFF3-201ENST00000291525 RTCBQ9Y3I0 505 aaKnown RBP23.53■■□□□ 1.36
TFF3-201ENST00000291525 SCN11AQ9UI33 1791 aa23.52■■□□□ 1.36
TFF3-201ENST00000291525 RC3H1Q5TC82 1133 aaKnown RBP23.51■■□□□ 1.35
TFF3-201ENST00000291525 SMIM5Q71RC9 77 aa23.51■■□□□ 1.35
TFF3-201ENST00000291525 CNTNAP4Q9C0A0 1308 aa23.51■■□□□ 1.35
TFF3-201ENST00000291525 PER1O15534 1290 aaPredicted RBP23.5■■□□□ 1.35
TFF3-201ENST00000291525 ADRA2BP18089 450 aa23.5■■□□□ 1.35
TFF3-201ENST00000291525 AKAP4Q5JQC9 854 aa23.5■■□□□ 1.35
TFF3-201ENST00000291525 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
TFF3-201ENST00000291525 TRAPPC3LQ5T215 181 aa23.5■■□□□ 1.35
TFF3-201ENST00000291525 YBX3P16989 372 aaKnown RBP eCLIP23.49■■□□□ 1.35
TFF3-201ENST00000291525 NPC1L1Q9UHC9 1359 aa23.48■■□□□ 1.35
TFF3-201ENST00000291525 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
TFF3-201ENST00000291525 NFATC2IPQ8NCF5 419 aa23.47■■□□□ 1.35
TFF3-201ENST00000291525 SLC4A9Q96Q91 983 aa23.47■■□□□ 1.35
TFF3-201ENST00000291525 VIRMAQ69YN4 1812 aaKnown RBP23.45■■□□□ 1.34
TFF3-201ENST00000291525 CICQ96RK0 1608 aaPredicted RBP23.45■■□□□ 1.34
TFF3-201ENST00000291525 PTCD1O75127 700 aaKnown RBP23.45■■□□□ 1.34
TFF3-201ENST00000291525 RPS6KA4O75676 772 aa23.45■■□□□ 1.34
TFF3-201ENST00000291525 HMOX1P09601 288 aa23.45■■□□□ 1.34
TFF3-201ENST00000291525 NLGN1Q8N2Q7 840 aa23.45■■□□□ 1.34
TFF3-201ENST00000291525 RFC4P35249 363 aa23.44■■□□□ 1.34
TFF3-201ENST00000291525 MMP10P09238 476 aa23.43■■□□□ 1.34
TFF3-201ENST00000291525 MYH14Q7Z406 1995 aaKnown RBP23.43■■□□□ 1.34
TFF3-201ENST00000291525 TJP1Q07157 1748 aa23.42■■□□□ 1.34
TFF3-201ENST00000291525 ARHGEF1Q92888 912 aaKnown RBP23.42■■□□□ 1.34
TFF3-201ENST00000291525 SLC52A2Q9HAB3 445 aa23.42■■□□□ 1.34
TFF3-201ENST00000291525 MRC1P22897 1456 aa23.42■■□□□ 1.34
TFF3-201ENST00000291525 C4AP0C0L4 1744 aa23.42■■□□□ 1.34
TFF3-201ENST00000291525 KIF13BQ9NQT8 1826 aa23.4■■□□□ 1.34
TFF3-201ENST00000291525 GOLGB1Q14789 3259 aaKnown RBP23.4■■□□□ 1.34
TFF3-201ENST00000291525 CRKLP46109 303 aaKnown RBP23.4■■□□□ 1.34
TFF3-201ENST00000291525 RNMTO43148 476 aaKnown RBP23.39■■□□□ 1.33
TFF3-201ENST00000291525 GYS1P13807 737 aa23.38■■□□□ 1.33
TFF3-201ENST00000291525 CNGB1Q14028 1251 aaPredicted RBP23.38■■□□□ 1.33
TFF3-201ENST00000291525 CCDC87Q9NVE4 849 aa23.38■■□□□ 1.33
TFF3-201ENST00000291525 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
TFF3-201ENST00000291525 COL3A1P02461 1466 aaPredicted RBP23.37■■□□□ 1.33
TFF3-201ENST00000291525 GIGYF1O75420 1035 aaPredicted RBP23.37■■□□□ 1.33
TFF3-201ENST00000291525 MTHFSDQ2M296 383 aaKnown RBP23.37■■□□□ 1.33
TFF3-201ENST00000291525 LGR6Q9HBX8 967 aa23.37■■□□□ 1.33
TFF3-201ENST00000291525 PARP3Q9Y6F1 533 aa23.37■■□□□ 1.33
TFF3-201ENST00000291525 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
TFF3-201ENST00000291525 C10orf71Q711Q0 1435 aa23.35■■□□□ 1.33
TFF3-201ENST00000291525 TGFB2P61812 414 aa23.35■■□□□ 1.33
TFF3-201ENST00000291525 CFAP53Q96M91 514 aa23.35■■□□□ 1.33
TFF3-201ENST00000291525 C1QTNF8P60827 252 aa23.34■■□□□ 1.33
TFF3-201ENST00000291525 PXDNLA1KZ92 1463 aa23.34■■□□□ 1.33
TFF3-201ENST00000291525 N4BP2Q86UW6 1770 aaPredicted RBP23.33■■□□□ 1.33
TFF3-201ENST00000291525 GAS2L2Q8NHY3 880 aa23.33■■□□□ 1.33
TFF3-201ENST00000291525 WWC3Q9ULE0 1092 aa23.33■■□□□ 1.33
TFF3-201ENST00000291525 USP42Q9H9J4 1324 aaKnown RBP23.33■■□□□ 1.32
TFF3-201ENST00000291525 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
TFF3-201ENST00000291525 KIAA1551Q9HCM1 1747 aa23.32■■□□□ 1.32
TFF3-201ENST00000291525 ATP10DQ9P241 1426 aa23.32■■□□□ 1.32
TFF3-201ENST00000291525 SLC39A6Q13433 755 aa23.31■■□□□ 1.32
TFF3-201ENST00000291525 KCPQ6ZWJ8 1503 aa23.31■■□□□ 1.32
TFF3-201ENST00000291525 UBR2Q8IWV8 1755 aa23.3■■□□□ 1.32
TFF3-201ENST00000291525 ZPR1O75312 459 aa23.3■■□□□ 1.32
TFF3-201ENST00000291525 INTS5Q6P9B9 1019 aaKnown RBP23.3■■□□□ 1.32
TFF3-201ENST00000291525 TTC5Q8N0Z6 440 aa23.3■■□□□ 1.32
TFF3-201ENST00000291525 VSIG10Q8N0Z9 540 aa23.3■■□□□ 1.32
TFF3-201ENST00000291525 SRP68Q9UHB9 627 aaKnown RBP23.29■■□□□ 1.32
TFF3-201ENST00000291525 GNAT3A8MTJ3 354 aa23.28■■□□□ 1.32
TFF3-201ENST00000291525 CYP19A1P11511 503 aaPredicted RBP23.28■■□□□ 1.32
TFF3-201ENST00000291525 TEFQ10587 303 aa23.28■■□□□ 1.32
TFF3-201ENST00000291525 NUDCQ9Y266 331 aa23.28■■□□□ 1.32
TFF3-201ENST00000291525 SOS1Q07889 1333 aaPredicted RBP23.28■■□□□ 1.32
TFF3-201ENST00000291525 ADCY9O60503 1353 aa23.27■■□□□ 1.32
TFF3-201ENST00000291525 FKBP8Q14318 412 aa23.27■■□□□ 1.32
TFF3-201ENST00000291525 GPBP1L1Q9HC44 474 aaPredicted RBP23.27■■□□□ 1.32
TFF3-201ENST00000291525 SENP3-EIF4A1A0A087X0R7 540 aa23.26■■□□□ 1.31
TFF3-201ENST00000291525 A0A0G2JLW4 131 aa23.26■■□□□ 1.31
TFF3-201ENST00000291525 BCS1LQ9Y276 419 aa23.26■■□□□ 1.31
TFF3-201ENST00000291525 BRCA1P38398 1863 aaKnown RBP23.26■■□□□ 1.31
TFF3-201ENST00000291525 COL15A1P39059 1388 aa23.26■■□□□ 1.31
TFF3-201ENST00000291525 SIPA1L3O60292 1781 aaPredicted RBP23.24■■□□□ 1.31
TFF3-201ENST00000291525 STARD3NLO95772 234 aa23.24■■□□□ 1.31
TFF3-201ENST00000291525 DPEP1P16444 411 aa23.24■■□□□ 1.31
TFF3-201ENST00000291525 USPL1Q5W0Q7 1092 aa23.23■■□□□ 1.31
TFF3-201ENST00000291525 ZBTB1Q9Y2K1 713 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms