RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
SEC16A-201ENST00000277537 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
SEC16A-201ENST00000277537 JARID2Q92833 1246 aaPredicted RBP11.04□□□□□ -0.64
SEC16A-201ENST00000277537 GPATCH3Q96I76 525 aa11.04□□□□□ -0.64
SEC16A-201ENST00000277537 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
SEC16A-201ENST00000277537 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
SEC16A-201ENST00000277537 FGD1P98174 961 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 SMC5Q8IY18 1101 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 NAP1L2Q9ULW6 460 aaPredicted RBP11.03□□□□□ -0.64
SEC16A-201ENST00000277537 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 CD163L1Q9NR16 1453 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 REC8O95072 547 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 GORABQ5T7V8 394 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
SEC16A-201ENST00000277537 FRAT2O75474 233 aaPredicted RBP11.03□□□□□ -0.64
SEC16A-201ENST00000277537 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 MYOM1P52179 1685 aa11.03□□□□□ -0.64
SEC16A-201ENST00000277537 HTATSF1O43719 755 aaKnown RBP11.02□□□□□ -0.65
SEC16A-201ENST00000277537 IFNL2Q8IZJ0 200 aa11.02□□□□□ -0.65
SEC16A-201ENST00000277537 CLASRPQ8N2M8 674 aaKnown RBP11.02□□□□□ -0.65
SEC16A-201ENST00000277537 MAP3K2Q9Y2U5 619 aa11.02□□□□□ -0.65
SEC16A-201ENST00000277537 CDK12Q9NYV4 1490 aaPredicted RBP11.02□□□□□ -0.65
SEC16A-201ENST00000277537 ZNF853P0CG23 659 aa11.02□□□□□ -0.65
SEC16A-201ENST00000277537 MYO3AQ8NEV4 1616 aa11.02□□□□□ -0.65
SEC16A-201ENST00000277537 IGSF1Q8N6C5 1336 aa11.02□□□□□ -0.65
SEC16A-201ENST00000277537 FOXD4L6Q3SYB3 417 aaPredicted RBP11.02□□□□□ -0.65
SEC16A-201ENST00000277537 FOXD4L3Q6VB84 417 aaPredicted RBP11.02□□□□□ -0.65
SEC16A-201ENST00000277537 DIAPH3Q9NSV4 1193 aa11.02□□□□□ -0.65
SEC16A-201ENST00000277537 ARHGEF10O15013 1369 aa11.01□□□□□ -0.65
SEC16A-201ENST00000277537 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
SEC16A-201ENST00000277537 ST18O60284 1047 aa11.01□□□□□ -0.65
SEC16A-201ENST00000277537 ANKRD44Q8N8A2 993 aa11.01□□□□□ -0.65
SEC16A-201ENST00000277537 CEP85Q6P2H3 762 aa11.01□□□□□ -0.65
SEC16A-201ENST00000277537 DLC1Q96QB1 1528 aa11.01□□□□□ -0.65
SEC16A-201ENST00000277537 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
SEC16A-201ENST00000277537 OTUD7AQ8TE49 926 aaPredicted RBP11.01□□□□□ -0.65
SEC16A-201ENST00000277537 PIK3R4Q99570 1358 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 PPP1R42Q7Z4L9 355 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
SEC16A-201ENST00000277537 LRRC7Q96NW7 1537 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 HSP90AB4PQ58FF6 505 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 TBC1D9Q6ZT07 1266 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 MYD88Q99836 296 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 USP19O94966 1318 aa11□□□□□ -0.65
SEC16A-201ENST00000277537 MED14O60244 1454 aa10.99□□□□□ -0.65
SEC16A-201ENST00000277537 ARHGEF25Q86VW2 580 aa10.99□□□□□ -0.65
SEC16A-201ENST00000277537 CWF19L2Q2TBE0 894 aaKnown RBP10.99□□□□□ -0.65
SEC16A-201ENST00000277537 BMP2KLQ5H9B9 411 aa10.99□□□□□ -0.65
SEC16A-201ENST00000277537 BRPF3Q9ULD4 1205 aa10.99□□□□□ -0.65
SEC16A-201ENST00000277537 AXIN2Q9Y2T1 843 aa10.99□□□□□ -0.65
SEC16A-201ENST00000277537 TBC1D2Q9BYX2 928 aa10.98□□□□□ -0.65
SEC16A-201ENST00000277537 MX1P20591 662 aa10.98□□□□□ -0.65
SEC16A-201ENST00000277537 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
SEC16A-201ENST00000277537 DCTPP1Q9H773 170 aa10.98□□□□□ -0.65
SEC16A-201ENST00000277537 SLAIN2Q9P270 581 aa10.98□□□□□ -0.65
SEC16A-201ENST00000277537 COPS6Q7L5N1 327 aa10.98□□□□□ -0.65
SEC16A-201ENST00000277537 IFT172Q9UG01 1749 aa10.98□□□□□ -0.65
SEC16A-201ENST00000277537 AEBP2Q6ZN18 517 aaPredicted RBP10.97□□□□□ -0.65
SEC16A-201ENST00000277537 ANP32BQ92688 251 aaKnown RBP10.97□□□□□ -0.65
SEC16A-201ENST00000277537 GBP4Q96PP9 640 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 TECPR2O15040 1411 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 ABCC4O15439 1325 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 NEK4P51957 841 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 AACSQ86V21 672 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 XAGE3Q8WTP9 111 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 FMNL2Q96PY5 1086 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 HYPKQ9NX55 129 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 CHMP5Q9NZZ3 219 aa10.97□□□□□ -0.65
SEC16A-201ENST00000277537 ERC2O15083 957 aa10.96□□□□□ -0.65
SEC16A-201ENST00000277537 EIF4A1P60842 406 aaKnown RBP10.96□□□□□ -0.65
SEC16A-201ENST00000277537 ZCRB1Q8TBF4 217 aaKnown RBP10.96□□□□□ -0.65
SEC16A-201ENST00000277537 LARP1Q6PKG0 1096 aaKnown RBP10.96□□□□□ -0.65
SEC16A-201ENST00000277537 CDC42BPGQ6DT37 1551 aa10.96□□□□□ -0.66
SEC16A-201ENST00000277537 PRAMEF22A3QJZ6 481 aa10.96□□□□□ -0.66
SEC16A-201ENST00000277537 SDSP20132 328 aa10.96□□□□□ -0.66
SEC16A-201ENST00000277537 GTF2E1P29083 439 aaPredicted RBP10.96□□□□□ -0.66
SEC16A-201ENST00000277537 PNMA6EA0A0J9YXQ4 647 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 PLEKHM2Q8IWE5 1019 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 TMOD3Q9NYL9 352 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 NBPF7P0C2Y1 421 aaPredicted RBP10.95□□□□□ -0.66
SEC16A-201ENST00000277537 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 CWC27Q6UX04 472 aaKnown RBP10.95□□□□□ -0.66
SEC16A-201ENST00000277537 CNTROBQ8N137 903 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 DNAJC2Q99543 621 aaKnown RBP10.95□□□□□ -0.66
SEC16A-201ENST00000277537 CCDC8Q9H0W5 538 aaPredicted RBP10.95□□□□□ -0.66
SEC16A-201ENST00000277537 PA2G4Q9UQ80 394 aaKnown RBP10.95□□□□□ -0.66
SEC16A-201ENST00000277537 ZNF335Q9H4Z2 1342 aaPredicted RBP10.95□□□□□ -0.66
SEC16A-201ENST00000277537 IQSEC2Q5JU85 1478 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 SNRPA1P09661 255 aaKnown RBP10.95□□□□□ -0.66
SEC16A-201ENST00000277537 ZNF790Q6PG37 636 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 UBE3BQ7Z3V4 1068 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 SIRT2Q8IXJ6 389 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 KIF1BPQ96EK5 621 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
SEC16A-201ENST00000277537 ATP8B2P98198 1209 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 FSD1Q9BTV5 496 aa10.94□□□□□ -0.66
SEC16A-201ENST00000277537 A0A087WZG4 1122 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1438.3 ms