RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 AEBP1Q8IUX7 1158 aa23.87■■□□□ 1.41
CSNK1D-201ENST00000269361 ZNF784Q8NCA9 323 aaPredicted RBP23.87■■□□□ 1.41
CSNK1D-201ENST00000269361 C4BP0C0L5 1744 aa23.87■■□□□ 1.41
CSNK1D-201ENST00000269361 SSFA2P28290 1259 aa23.86■■□□□ 1.41
CSNK1D-201ENST00000269361 IL13P35225 146 aa23.85■■□□□ 1.41
CSNK1D-201ENST00000269361 SULT6B1Q6IMI4 303 aa23.85■■□□□ 1.41
CSNK1D-201ENST00000269361 CD2APQ9Y5K6 639 aa23.84■■□□□ 1.41
CSNK1D-201ENST00000269361 TAF1LQ8IZX4 1826 aa23.83■■□□□ 1.41
CSNK1D-201ENST00000269361 GNPATO15228 680 aa23.83■■□□□ 1.41
CSNK1D-201ENST00000269361 MTHFSP49914 203 aa23.82■■□□□ 1.4
CSNK1D-201ENST00000269361 CABP4P57796 275 aa23.82■■□□□ 1.4
CSNK1D-201ENST00000269361 C1orf141Q5JVX7 400 aa23.82■■□□□ 1.4
CSNK1D-201ENST00000269361 PER1O15534 1290 aaPredicted RBP23.81■■□□□ 1.4
CSNK1D-201ENST00000269361 SLC4A9Q96Q91 983 aa23.81■■□□□ 1.4
CSNK1D-201ENST00000269361 RBM42Q9BTD8 480 aaKnown RBP23.81■■□□□ 1.4
CSNK1D-201ENST00000269361 KDRP35968 1356 aa23.8■■□□□ 1.4
CSNK1D-201ENST00000269361 KDM6AO15550 1401 aaPredicted RBP23.8■■□□□ 1.4
CSNK1D-201ENST00000269361 YBX3P16989 372 aaKnown RBP eCLIP23.8■■□□□ 1.42e-6■□□□□ 10.5
CSNK1D-201ENST00000269361 GRIN3BO60391 1043 aa23.79■■□□□ 1.4
CSNK1D-201ENST00000269361 GOLGB1Q14789 3259 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-201ENST00000269361 CC2D1BQ5T0F9 858 aaKnown RBP23.76■■□□□ 1.39
CSNK1D-201ENST00000269361 TRAPPC3LQ5T215 181 aa23.76■■□□□ 1.39
CSNK1D-201ENST00000269361 RC3H1Q5TC82 1133 aaKnown RBP23.76■■□□□ 1.39
CSNK1D-201ENST00000269361 NFATC2IPQ8NCF5 419 aa23.76■■□□□ 1.39
CSNK1D-201ENST00000269361 RTCBQ9Y3I0 505 aaKnown RBP23.76■■□□□ 1.39
CSNK1D-201ENST00000269361 UBR3Q6ZT12 1888 aa23.75■■□□□ 1.39
CSNK1D-201ENST00000269361 PTCD1O75127 700 aaKnown RBP23.73■■□□□ 1.39
CSNK1D-201ENST00000269361 AKAP4Q5JQC9 854 aa23.72■■□□□ 1.39
CSNK1D-201ENST00000269361 CNTNAP4Q9C0A0 1308 aa23.72■■□□□ 1.39
CSNK1D-201ENST00000269361 RPS6KA4O75676 772 aa23.71■■□□□ 1.39
CSNK1D-201ENST00000269361 HMOX1P09601 288 aa23.71■■□□□ 1.39
CSNK1D-201ENST00000269361 ADRA2BP18089 450 aa23.71■■□□□ 1.39
CSNK1D-201ENST00000269361 ARHGEF1Q92888 912 aaKnown RBP23.71■■□□□ 1.39
CSNK1D-201ENST00000269361 DIAPH1O60610 1272 aaKnown RBP23.7■■□□□ 1.38
CSNK1D-201ENST00000269361 MMP10P09238 476 aa23.7■■□□□ 1.38
CSNK1D-201ENST00000269361 NLGN1Q8N2Q7 840 aa23.7■■□□□ 1.38
CSNK1D-201ENST00000269361 CHD4Q14839 1912 aa23.69■■□□□ 1.38
CSNK1D-201ENST00000269361 RFC4P35249 363 aa23.68■■□□□ 1.38
CSNK1D-201ENST00000269361 LGR6Q9HBX8 967 aa23.68■■□□□ 1.38
CSNK1D-201ENST00000269361 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
CSNK1D-201ENST00000269361 ZNF831Q5JPB2 1677 aa23.67■■□□□ 1.38
CSNK1D-201ENST00000269361 SLC52A2Q9HAB3 445 aa23.67■■□□□ 1.38
CSNK1D-201ENST00000269361 CNGB1Q14028 1251 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-201ENST00000269361 GYS1P13807 737 aa23.65■■□□□ 1.38
CSNK1D-201ENST00000269361 CRKLP46109 303 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-201ENST00000269361 MTHFSDQ2M296 383 aaKnown RBP23.65■■□□□ 1.38
CSNK1D-201ENST00000269361 RNMTO43148 476 aaKnown RBP23.64■■□□□ 1.37
CSNK1D-201ENST00000269361 WWC3Q9ULE0 1092 aa23.64■■□□□ 1.37
CSNK1D-201ENST00000269361 C1QTNF8P60827 252 aa23.62■■□□□ 1.37
CSNK1D-201ENST00000269361 INTS5Q6P9B9 1019 aaKnown RBP23.61■■□□□ 1.37
CSNK1D-201ENST00000269361 COL5A3P25940 1745 aaPredicted RBP23.6■■□□□ 1.37
CSNK1D-201ENST00000269361 TGFB2P61812 414 aa23.6■■□□□ 1.37
CSNK1D-201ENST00000269361 PARP3Q9Y6F1 533 aa23.6■■□□□ 1.37
CSNK1D-201ENST00000269361 U2SURPO15042 1029 aaKnown RBP23.59■■□□□ 1.37
CSNK1D-201ENST00000269361 GIGYF1O75420 1035 aaPredicted RBP23.59■■□□□ 1.37
CSNK1D-201ENST00000269361 SLC39A6Q13433 755 aa23.59■■□□□ 1.37
CSNK1D-201ENST00000269361 DNAJC10Q8IXB1 793 aa23.59■■□□□ 1.37
CSNK1D-201ENST00000269361 CCDC87Q9NVE4 849 aa23.59■■□□□ 1.37
CSNK1D-201ENST00000269361 SRP68Q9UHB9 627 aaKnown RBP23.58■■□□□ 1.37
CSNK1D-201ENST00000269361 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
CSNK1D-201ENST00000269361 A0A0G2JLW4 131 aa23.57■■□□□ 1.36
CSNK1D-201ENST00000269361 USP42Q9H9J4 1324 aaKnown RBP23.57■■□□□ 1.36
CSNK1D-201ENST00000269361 PXDNLA1KZ92 1463 aa23.56■■□□□ 1.36
CSNK1D-201ENST00000269361 MRC1P22897 1456 aa23.56■■□□□ 1.36
CSNK1D-201ENST00000269361 CICQ96RK0 1608 aaPredicted RBP23.56■■□□□ 1.36
CSNK1D-201ENST00000269361 CYP19A1P11511 503 aaPredicted RBP23.56■■□□□ 1.36
CSNK1D-201ENST00000269361 C10orf71Q711Q0 1435 aa23.56■■□□□ 1.36
CSNK1D-201ENST00000269361 SCN11AQ9UI33 1791 aa23.55■■□□□ 1.36
CSNK1D-201ENST00000269361 FKBP8Q14318 412 aa23.55■■□□□ 1.36
CSNK1D-201ENST00000269361 ATP10DQ9P241 1426 aa23.55■■□□□ 1.36
CSNK1D-201ENST00000269361 MYH14Q7Z406 1995 aaKnown RBP23.53■■□□□ 1.36
CSNK1D-201ENST00000269361 DPEP1P16444 411 aa23.53■■□□□ 1.36
CSNK1D-201ENST00000269361 GAS2L2Q8NHY3 880 aa23.53■■□□□ 1.36
CSNK1D-201ENST00000269361 TJP1Q07157 1748 aa23.53■■□□□ 1.36
CSNK1D-201ENST00000269361 VSIG10Q8N0Z9 540 aa23.52■■□□□ 1.36
CSNK1D-201ENST00000269361 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
CSNK1D-201ENST00000269361 BCS1LQ9Y276 419 aa23.52■■□□□ 1.36
CSNK1D-201ENST00000269361 SOS1Q07889 1333 aaPredicted RBP23.52■■□□□ 1.36
CSNK1D-201ENST00000269361 ADCY9O60503 1353 aa23.52■■□□□ 1.36
CSNK1D-201ENST00000269361 SENP3-EIF4A1A0A087X0R7 540 aa23.51■■□□□ 1.35
CSNK1D-201ENST00000269361 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
CSNK1D-201ENST00000269361 ZPR1O75312 459 aa23.51■■□□□ 1.35
CSNK1D-201ENST00000269361 DDR1Q08345 913 aa23.51■■□□□ 1.35
CSNK1D-201ENST00000269361 IL17REQ8NFR9 667 aa23.51■■□□□ 1.35
CSNK1D-201ENST00000269361 C4AP0C0L4 1744 aa23.5■■□□□ 1.35
CSNK1D-201ENST00000269361 KCPQ6ZWJ8 1503 aa23.5■■□□□ 1.35
CSNK1D-201ENST00000269361 USPL1Q5W0Q7 1092 aa23.5■■□□□ 1.35
CSNK1D-201ENST00000269361 GPBP1L1Q9HC44 474 aaPredicted RBP23.5■■□□□ 1.35
CSNK1D-201ENST00000269361 TM4SF1P30408 202 aa23.49■■□□□ 1.35
CSNK1D-201ENST00000269361 TEFQ10587 303 aa23.49■■□□□ 1.35
CSNK1D-201ENST00000269361 TTC5Q8N0Z6 440 aa23.49■■□□□ 1.35
CSNK1D-201ENST00000269361 ADAMTS7Q9UKP4 1686 aa23.48■■□□□ 1.35
CSNK1D-201ENST00000269361 KCNA3P22001 575 aa23.48■■□□□ 1.35
CSNK1D-201ENST00000269361 ZBTB1Q9Y2K1 713 aa23.48■■□□□ 1.35
CSNK1D-201ENST00000269361 POLRMTO00411 1230 aaKnown RBP23.47■■□□□ 1.35
CSNK1D-201ENST00000269361 FCHSD2O94868 740 aa23.47■■□□□ 1.35
CSNK1D-201ENST00000269361 ZNF526Q8TF50 670 aaPredicted RBP23.47■■□□□ 1.35
CSNK1D-201ENST00000269361 PHACTR3Q96KR7 559 aa23.47■■□□□ 1.35
CSNK1D-201ENST00000269361 NARFQ9UHQ1 456 aa23.47■■□□□ 1.35
CSNK1D-201ENST00000269361 KIF13BQ9NQT8 1826 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms