RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PLEKHG2Q9H7P9 1386 aa20.94■□□□□ 0.94
CCDC40-201ENST00000269318 CACNA1FO60840 1977 aa20.94■□□□□ 0.94
CCDC40-201ENST00000269318 ATP10DQ9P241 1426 aa20.93■□□□□ 0.94
CCDC40-201ENST00000269318 MEGF6O75095 1541 aa20.93■□□□□ 0.94
CCDC40-201ENST00000269318 HOXB7P09629 217 aa20.93■□□□□ 0.94
CCDC40-201ENST00000269318 FLIIQ13045 1269 aa20.93■□□□□ 0.94
CCDC40-201ENST00000269318 GCC1Q96CN9 775 aa20.93■□□□□ 0.94
CCDC40-201ENST00000269318 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
CCDC40-201ENST00000269318 RAPGEF4Q8WZA2 1011 aa20.92■□□□□ 0.94
CCDC40-201ENST00000269318 BTBD11A6QL63 1104 aa20.92■□□□□ 0.94
CCDC40-201ENST00000269318 KCNQ3O43525 872 aa20.92■□□□□ 0.94
CCDC40-201ENST00000269318 F6X3S4 739 aa20.91■□□□□ 0.94
CCDC40-201ENST00000269318 CCT4P50991 539 aaKnown RBP20.91■□□□□ 0.94
CCDC40-201ENST00000269318 HDGFL1Q5TGJ6 251 aa20.91■□□□□ 0.94
CCDC40-201ENST00000269318 NECTIN2Q92692 538 aa20.91■□□□□ 0.94
CCDC40-201ENST00000269318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC40-201ENST00000269318 NHSL1Q5SYE7 1610 aa20.9■□□□□ 0.94
CCDC40-201ENST00000269318 CHD1LQ86WJ1 897 aa20.9■□□□□ 0.94
CCDC40-201ENST00000269318 MEIS3Q99687 375 aa20.9■□□□□ 0.94
CCDC40-201ENST00000269318 CSB-PGBD3P0DP91 1061 aa20.89■□□□□ 0.93
CCDC40-201ENST00000269318 TATP17735 454 aaPredicted RBP20.89■□□□□ 0.93
CCDC40-201ENST00000269318 ABCA3Q99758 1704 aa20.89■□□□□ 0.93
CCDC40-201ENST00000269318 HEG1Q9ULI3 1381 aa20.89■□□□□ 0.93
CCDC40-201ENST00000269318 ANKRD44Q8N8A2 993 aa20.88■□□□□ 0.93
CCDC40-201ENST00000269318 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
CCDC40-201ENST00000269318 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
CCDC40-201ENST00000269318 FKBP5Q13451 457 aaPredicted RBP20.88■□□□□ 0.93
CCDC40-201ENST00000269318 PXDNLA1KZ92 1463 aa20.88■□□□□ 0.93
CCDC40-201ENST00000269318 KDM6AO15550 1401 aaPredicted RBP20.88■□□□□ 0.93
CCDC40-201ENST00000269318 SLC4A10Q6U841 1118 aa20.87■□□□□ 0.93
CCDC40-201ENST00000269318 RPAP2Q8IXW5 612 aaPredicted RBP20.87■□□□□ 0.93
CCDC40-201ENST00000269318 SPG7Q9UQ90 795 aa20.87■□□□□ 0.93
CCDC40-201ENST00000269318 PKD1L3Q7Z443 1732 aa20.87■□□□□ 0.93
CCDC40-201ENST00000269318 PHKG2P15735 406 aa20.86■□□□□ 0.93
CCDC40-201ENST00000269318 CEP85Q6P2H3 762 aa20.86■□□□□ 0.93
CCDC40-201ENST00000269318 LNPKQ9C0E8 428 aa20.86■□□□□ 0.93
CCDC40-201ENST00000269318 SCN11AQ9UI33 1791 aa20.86■□□□□ 0.93
CCDC40-201ENST00000269318 SEC24BO95487 1268 aa20.85■□□□□ 0.93
CCDC40-201ENST00000269318 CHMP4AQ9BY43 222 aa20.85■□□□□ 0.93
CCDC40-201ENST00000269318 DCTPP1Q9H773 170 aa20.85■□□□□ 0.93
CCDC40-201ENST00000269318 ANKRD45Q5TZF3 282 aa20.85■□□□□ 0.93
CCDC40-201ENST00000269318 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
CCDC40-201ENST00000269318 PHAXQ9H814 394 aaKnown RBP20.84■□□□□ 0.93
CCDC40-201ENST00000269318 WDR17Q8IZU2 1322 aa20.84■□□□□ 0.93
CCDC40-201ENST00000269318 EIF2S2P20042 333 aaKnown RBP20.83■□□□□ 0.93
CCDC40-201ENST00000269318 COL5A2P05997 1499 aaPredicted RBP20.83■□□□□ 0.93
CCDC40-201ENST00000269318 GIGYF1O75420 1035 aaPredicted RBP20.83■□□□□ 0.92
CCDC40-201ENST00000269318 IFNL2Q8IZJ0 200 aa20.83■□□□□ 0.92
CCDC40-201ENST00000269318 CHPF2Q9P2E5 772 aa20.83■□□□□ 0.92
CCDC40-201ENST00000269318 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.92
CCDC40-201ENST00000269318 MRC1P22897 1456 aa20.82■□□□□ 0.92
CCDC40-201ENST00000269318 ANP32EQ9BTT0 268 aa20.82■□□□□ 0.92
CCDC40-201ENST00000269318 CYP27B1O15528 508 aa20.81■□□□□ 0.92
CCDC40-201ENST00000269318 SLC52A2Q9HAB3 445 aa20.81■□□□□ 0.92
CCDC40-201ENST00000269318 ERICH6Q7L0X2 663 aa20.8■□□□□ 0.92
CCDC40-201ENST00000269318 DDRGK1Q96HY6 314 aa20.8■□□□□ 0.92
CCDC40-201ENST00000269318 DCAF5Q96JK2 942 aa20.79■□□□□ 0.92
CCDC40-201ENST00000269318 PARP4Q9UKK3 1724 aaKnown RBP20.79■□□□□ 0.92
CCDC40-201ENST00000269318 GNAI2P04899 355 aa20.78■□□□□ 0.92
CCDC40-201ENST00000269318 GNAI3P08754 354 aa20.78■□□□□ 0.92
CCDC40-201ENST00000269318 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
CCDC40-201ENST00000269318 ZNF790Q6PG37 636 aa20.77■□□□□ 0.92
CCDC40-201ENST00000269318 PRAMEF22A3QJZ6 481 aa20.77■□□□□ 0.92
CCDC40-201ENST00000269318 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.92
CCDC40-201ENST00000269318 BMP2KLQ5H9B9 411 aa20.76■□□□□ 0.91
CCDC40-201ENST00000269318 TOM1L2Q6ZVM7 507 aa20.76■□□□□ 0.91
CCDC40-201ENST00000269318 USP44Q9H0E7 712 aa20.76■□□□□ 0.91
CCDC40-201ENST00000269318 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
CCDC40-201ENST00000269318 HMMRO75330 724 aa20.75■□□□□ 0.91
CCDC40-201ENST00000269318 ANXA1P04083 346 aa20.75■□□□□ 0.91
CCDC40-201ENST00000269318 CARD10Q9BWT7 1032 aa20.75■□□□□ 0.91
CCDC40-201ENST00000269318 ADCY9O60503 1353 aa20.75■□□□□ 0.91
CCDC40-201ENST00000269318 SLC39A6Q13433 755 aa20.74■□□□□ 0.91
CCDC40-201ENST00000269318 C5P01031 1676 aa20.74■□□□□ 0.91
CCDC40-201ENST00000269318 PI4KAP2A4QPH2 592 aa20.74■□□□□ 0.91
CCDC40-201ENST00000269318 PROSER3Q2NL68 480 aa20.74■□□□□ 0.91
CCDC40-201ENST00000269318 PI4KAP1Q8N8J0 262 aa20.74■□□□□ 0.91
CCDC40-201ENST00000269318 DNAAF4Q8WXU2 420 aa20.74■□□□□ 0.91
CCDC40-201ENST00000269318 BEND3Q5T5X7 828 aa20.73■□□□□ 0.91
CCDC40-201ENST00000269318 SRCIN1Q9C0H9 1055 aa20.73■□□□□ 0.91
CCDC40-201ENST00000269318 ROBO1Q9Y6N7 1651 aa20.72■□□□□ 0.91
CCDC40-201ENST00000269318 PLEKHM2Q8IWE5 1019 aa20.72■□□□□ 0.91
CCDC40-201ENST00000269318 TBC1D32Q96NH3 1257 aa20.72■□□□□ 0.91
CCDC40-201ENST00000269318 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
CCDC40-201ENST00000269318 PCDH11XQ9BZA7 1347 aa20.71■□□□□ 0.91
CCDC40-201ENST00000269318 PCDH11YQ9BZA8 1340 aa20.71■□□□□ 0.91
CCDC40-201ENST00000269318 ATP8B2P98198 1209 aa20.71■□□□□ 0.91
CCDC40-201ENST00000269318 PDIA6Q15084 440 aa20.71■□□□□ 0.91
CCDC40-201ENST00000269318 ZCRB1Q8TBF4 217 aaKnown RBP20.71■□□□□ 0.91
CCDC40-201ENST00000269318 LRRFIP2Q9Y608 721 aaKnown RBP20.71■□□□□ 0.91
CCDC40-201ENST00000269318 AHDC1Q5TGY3 1603 aaPredicted RBP20.71■□□□□ 0.91
CCDC40-201ENST00000269318 LARP1Q6PKG0 1096 aaKnown RBP20.7■□□□□ 0.9
CCDC40-201ENST00000269318 UPF2Q9HAU5 1272 aaKnown RBP20.7■□□□□ 0.9
CCDC40-201ENST00000269318 DDX21Q9NR30 783 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCDC40-201ENST00000269318 HYPKQ9NX55 129 aa20.7■□□□□ 0.9
CCDC40-201ENST00000269318 UBTFL1P0CB47 393 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-201ENST00000269318 ZNF496Q96IT1 587 aaPredicted RBP20.7■□□□□ 0.9
CCDC40-201ENST00000269318 SHANK3Q9BYB0 1731 aa20.69■□□□□ 0.9
CCDC40-201ENST00000269318 PNMA6EA0A0J9YXQ4 647 aa20.69■□□□□ 0.9
CCDC40-201ENST00000269318 IL2RBP14784 551 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms