RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
FOXF1-201ENST00000262426 PHAXQ9H814 394 aaKnown RBP18.15■□□□□ 0.5
FOXF1-201ENST00000262426 PXDNQ92626 1479 aa18.15■□□□□ 0.5
FOXF1-201ENST00000262426 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
FOXF1-201ENST00000262426 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
FOXF1-201ENST00000262426 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
FOXF1-201ENST00000262426 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
FOXF1-201ENST00000262426 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
FOXF1-201ENST00000262426 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
FOXF1-201ENST00000262426 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
FOXF1-201ENST00000262426 API5Q9BZZ5 524 aaKnown RBP18.15■□□□□ 0.5
FOXF1-201ENST00000262426 PRDM11Q9NQV5 511 aa18.15■□□□□ 0.5
FOXF1-201ENST00000262426 ABCC4O15439 1325 aa18.14■□□□□ 0.5
FOXF1-201ENST00000262426 SEC24BO95487 1268 aa18.14■□□□□ 0.49
FOXF1-201ENST00000262426 FKBP5Q13451 457 aaPredicted RBP18.14■□□□□ 0.49
FOXF1-201ENST00000262426 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
FOXF1-201ENST00000262426 MEIS3Q99687 375 aa18.14■□□□□ 0.49
FOXF1-201ENST00000262426 STK31Q9BXU1 1019 aa18.14■□□□□ 0.49
FOXF1-201ENST00000262426 AKAP4Q5JQC9 854 aa18.13■□□□□ 0.49
FOXF1-201ENST00000262426 HDGFL1Q5TGJ6 251 aa18.13■□□□□ 0.49
FOXF1-201ENST00000262426 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
FOXF1-201ENST00000262426 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
FOXF1-201ENST00000262426 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
FOXF1-201ENST00000262426 SLIT3O75094 1523 aa18.11■□□□□ 0.49
FOXF1-201ENST00000262426 ANKRD45Q5TZF3 282 aa18.11■□□□□ 0.49
FOXF1-201ENST00000262426 TNS3Q68CZ2 1445 aa18.11■□□□□ 0.49
FOXF1-201ENST00000262426 XIRP1Q702N8 1843 aaKnown RBP18.11■□□□□ 0.49
FOXF1-201ENST00000262426 FLIIQ13045 1269 aa18.1■□□□□ 0.49
FOXF1-201ENST00000262426 PANK2Q9BZ23 570 aa18.1■□□□□ 0.49
FOXF1-201ENST00000262426 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
FOXF1-201ENST00000262426 EIF4A1P60842 406 aaKnown RBP18.09■□□□□ 0.49
FOXF1-201ENST00000262426 TOM1L2Q6ZVM7 507 aa18.09■□□□□ 0.49
FOXF1-201ENST00000262426 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
FOXF1-201ENST00000262426 DCCP43146 1447 aa18.09■□□□□ 0.49
FOXF1-201ENST00000262426 HDAC1Q13547 482 aaPredicted RBP18.09■□□□□ 0.49
FOXF1-201ENST00000262426 CCDC30Q5VVM6 783 aa18.09■□□□□ 0.49
FOXF1-201ENST00000262426 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
FOXF1-201ENST00000262426 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
FOXF1-201ENST00000262426 AMOTQ4VCS5 1084 aa18.09■□□□□ 0.49
FOXF1-201ENST00000262426 RGS12O14924 1447 aa18.08■□□□□ 0.49
FOXF1-201ENST00000262426 TATP17735 454 aaPredicted RBP18.08■□□□□ 0.48
FOXF1-201ENST00000262426 KIF1AQ12756 1690 aa18.08■□□□□ 0.48
FOXF1-201ENST00000262426 AAMPQ13685 434 aa18.07■□□□□ 0.48
FOXF1-201ENST00000262426 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
FOXF1-201ENST00000262426 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
FOXF1-201ENST00000262426 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
FOXF1-201ENST00000262426 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
FOXF1-201ENST00000262426 SMC5Q8IY18 1101 aa18.06■□□□□ 0.48
FOXF1-201ENST00000262426 CYP27B1O15528 508 aa18.05■□□□□ 0.48
FOXF1-201ENST00000262426 DDX54Q8TDD1 881 aaKnown RBP18.05■□□□□ 0.48
FOXF1-201ENST00000262426 MEGF6O75095 1541 aa18.05■□□□□ 0.48
FOXF1-201ENST00000262426 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
FOXF1-201ENST00000262426 LARP1Q6PKG0 1096 aaKnown RBP18.05■□□□□ 0.48
FOXF1-201ENST00000262426 SOS2Q07890 1332 aaPredicted RBP18.04■□□□□ 0.48
FOXF1-201ENST00000262426 AIMP1Q12904 312 aaKnown RBP18.04■□□□□ 0.48
FOXF1-201ENST00000262426 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
FOXF1-201ENST00000262426 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
FOXF1-201ENST00000262426 PTPRCP08575 1304 aa18.04■□□□□ 0.48
FOXF1-201ENST00000262426 EVA1CP58658 441 aa18.03■□□□□ 0.48
FOXF1-201ENST00000262426 PHKG2P15735 406 aa18.03■□□□□ 0.48
FOXF1-201ENST00000262426 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
FOXF1-201ENST00000262426 RBM10P98175 930 aaKnown RBP18.02■□□□□ 0.47
FOXF1-201ENST00000262426 PI4KAP2A4QPH2 592 aa18.01■□□□□ 0.47
FOXF1-201ENST00000262426 PIP4K2BP78356 416 aa18.01■□□□□ 0.47
FOXF1-201ENST00000262426 PI4KAP1Q8N8J0 262 aa18.01■□□□□ 0.47
FOXF1-201ENST00000262426 NUCB1Q02818 461 aa18.01■□□□□ 0.47
FOXF1-201ENST00000262426 MYL6BP14649 208 aa18.01■□□□□ 0.47
FOXF1-201ENST00000262426 CEP85Q6P2H3 762 aa18.01■□□□□ 0.47
FOXF1-201ENST00000262426 SPG7Q9UQ90 795 aa18.01■□□□□ 0.47
FOXF1-201ENST00000262426 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
FOXF1-201ENST00000262426 GIGYF1O75420 1035 aaPredicted RBP17.99■□□□□ 0.47
FOXF1-201ENST00000262426 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
FOXF1-201ENST00000262426 BTG4Q9NY30 223 aa17.98■□□□□ 0.47
FOXF1-201ENST00000262426 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
FOXF1-201ENST00000262426 CAMTA1Q9Y6Y1 1673 aa17.98■□□□□ 0.47
FOXF1-201ENST00000262426 ADAMTS2O95450 1211 aa17.98■□□□□ 0.47
FOXF1-201ENST00000262426 ZNF790Q6PG37 636 aa17.98■□□□□ 0.47
FOXF1-201ENST00000262426 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
FOXF1-201ENST00000262426 SLC52A2Q9HAB3 445 aa17.98■□□□□ 0.47
FOXF1-201ENST00000262426 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
FOXF1-201ENST00000262426 KAT6BQ8WYB5 2073 aa17.97■□□□□ 0.47
FOXF1-201ENST00000262426 LRRFIP2Q9Y608 721 aaKnown RBP17.97■□□□□ 0.47
FOXF1-201ENST00000262426 KDM6AO15550 1401 aaPredicted RBP17.97■□□□□ 0.47
FOXF1-201ENST00000262426 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
FOXF1-201ENST00000262426 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
FOXF1-201ENST00000262426 ANKRD44Q8N8A2 993 aa17.96■□□□□ 0.47
FOXF1-201ENST00000262426 CHMP4BQ9H444 224 aaKnown RBP17.96■□□□□ 0.47
FOXF1-201ENST00000262426 USP16Q9Y5T5 823 aa17.96■□□□□ 0.47
FOXF1-201ENST00000262426 LRRC37A3O60309 1634 aa17.96■□□□□ 0.47
FOXF1-201ENST00000262426 CCT4P50991 539 aaKnown RBP17.96■□□□□ 0.47
FOXF1-201ENST00000262426 WDR17Q8IZU2 1322 aa17.96■□□□□ 0.47
FOXF1-201ENST00000262426 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
FOXF1-201ENST00000262426 CABP4P57796 275 aa17.95■□□□□ 0.46
FOXF1-201ENST00000262426 TSHZ3Q63HK5 1081 aa17.95■□□□□ 0.46
FOXF1-201ENST00000262426 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
FOXF1-201ENST00000262426 NUTM2BA6NNL0 878 aaPredicted RBP17.95■□□□□ 0.46
FOXF1-201ENST00000262426 NUTM2EB1AL46 878 aaPredicted RBP17.95■□□□□ 0.46
FOXF1-201ENST00000262426 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
FOXF1-201ENST00000262426 CWF19L2Q2TBE0 894 aaKnown RBP17.95■□□□□ 0.46
FOXF1-201ENST00000262426 NUTM2AQ8IVF1 878 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms