RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
SREBF1-201ENST00000261646 STK38Q15208 465 aa19.18■□□□□ 0.66
SREBF1-201ENST00000261646 CEP57L1Q8IYX8 460 aa19.18■□□□□ 0.66
SREBF1-201ENST00000261646 DDX11Q96FC9 970 aa19.18■□□□□ 0.66
SREBF1-201ENST00000261646 LMBRD1Q9NUN5 540 aa19.18■□□□□ 0.66
SREBF1-201ENST00000261646 USP26Q9BXU7 913 aa19.17■□□□□ 0.66
SREBF1-201ENST00000261646 PLEKHM2Q8IWE5 1019 aa19.17■□□□□ 0.66
SREBF1-201ENST00000261646 GTPBP4Q9BZE4 634 aaKnown RBP19.17■□□□□ 0.66
SREBF1-201ENST00000261646 INSRP06213 1382 aa19.17■□□□□ 0.66
SREBF1-201ENST00000261646 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
SREBF1-201ENST00000261646 ZNF165P49910 485 aa19.17■□□□□ 0.66
SREBF1-201ENST00000261646 SERPINC1P01008 464 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 SETQ01105 290 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-201ENST00000261646 TRIM29Q14134 588 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 ANKRD1Q15327 319 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 ARHGAP45Q92619 1136 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 LEKR1Q6ZMV7 388 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 KDM5BQ9UGL1 1544 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 OLFM4Q6UX06 510 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 MEIS3Q99687 375 aa19.16■□□□□ 0.66
SREBF1-201ENST00000261646 SCAND2PQ9GZW5 306 aaPredicted RBP19.16■□□□□ 0.66
SREBF1-201ENST00000261646 POLR3GO15318 223 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-201ENST00000261646 CCDC61Q9Y6R9 512 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 KDM4AO75164 1064 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 TMCO3Q6UWJ1 677 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 AK7Q96M32 723 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 ZNF396Q96N95 335 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-201ENST00000261646 NEUROD6Q96NK8 337 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 TMEM63CQ9P1W3 806 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 CALCOCO1Q9P1Z2 691 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 TARBP1Q13395 1621 aaKnown RBP19.15■□□□□ 0.66
SREBF1-201ENST00000261646 ERBB4Q15303 1308 aa19.15■□□□□ 0.66
SREBF1-201ENST00000261646 TSPYL6Q8N831 410 aa19.14■□□□□ 0.66
SREBF1-201ENST00000261646 C1orf141Q5JVX7 400 aa19.14■□□□□ 0.65
SREBF1-201ENST00000261646 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
SREBF1-201ENST00000261646 CCP110O43303 1012 aa19.14■□□□□ 0.65
SREBF1-201ENST00000261646 DDX58O95786 925 aaKnown RBP19.14■□□□□ 0.65
SREBF1-201ENST00000261646 GJB2P29033 226 aa19.14■□□□□ 0.65
SREBF1-201ENST00000261646 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.14■□□□□ 0.65
SREBF1-201ENST00000261646 V9GYY5 206 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-201ENST00000261646 ZSCAN22P10073 491 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-201ENST00000261646 PDE1AP54750 535 aa19.14■□□□□ 0.65
SREBF1-201ENST00000261646 ACBD3Q9H3P7 528 aa19.14■□□□□ 0.65
SREBF1-201ENST00000261646 HIP1O00291 1037 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 ANKRD44Q8N8A2 993 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 DNAJC2Q99543 621 aaKnown RBP19.13■□□□□ 0.65
SREBF1-201ENST00000261646 DUOX2Q9NRD8 1548 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 NCKAP5LQ9HCH0 1330 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 GTF2F1P35269 517 aaKnown RBP eCLIP19.13■□□□□ 0.654e-8■■■■■ 117.5
SREBF1-201ENST00000261646 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 RBM33Q96EV2 1170 aaKnown RBP19.13■□□□□ 0.65
SREBF1-201ENST00000261646 MRPL50Q8N5N7 158 aaKnown RBP19.13■□□□□ 0.65
SREBF1-201ENST00000261646 MYRIPQ8NFW9 859 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 HOOK1Q9UJC3 728 aaKnown RBP19.13■□□□□ 0.65
SREBF1-201ENST00000261646 SHANK2Q9UPX8 1470 aa19.13■□□□□ 0.65
SREBF1-201ENST00000261646 APPP05067 770 aa19.12■□□□□ 0.65
SREBF1-201ENST00000261646 SFPQP23246 707 aaKnown RBP eCLIP19.12■□□□□ 0.65
SREBF1-201ENST00000261646 KRT24Q2M2I5 525 aa19.12■□□□□ 0.65
SREBF1-201ENST00000261646 TRMT2AQ8IZ69 625 aaKnown RBP19.12■□□□□ 0.65
SREBF1-201ENST00000261646 PHACTR3Q96KR7 559 aa19.12■□□□□ 0.65
SREBF1-201ENST00000261646 SIL1Q9H173 461 aa19.12■□□□□ 0.65
SREBF1-201ENST00000261646 DCTPP1Q9H773 170 aa19.12■□□□□ 0.65
SREBF1-201ENST00000261646 ZNF521Q96K83 1311 aa19.12■□□□□ 0.65
SREBF1-201ENST00000261646 ZBTB7BO15156 539 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-201ENST00000261646 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 IPO7O95373 1038 aaKnown RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 TRDNQ13061 729 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 PKP1Q13835 747 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 KRT222Q8N1A0 295 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 ZNF500O60304 480 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 CEP135Q66GS9 1140 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 CCDC70Q6NSX1 233 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 OTUD7AQ8TE49 926 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 ESYT1Q9BSJ8 1104 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 NUP160Q12769 1436 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 VAMP4O75379 141 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 URI1O94763 535 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 PSME1Q06323 249 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 AACSQ86V21 672 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 CHAMP1Q96JM3 812 aa19.11■□□□□ 0.65
SREBF1-201ENST00000261646 SH2B1Q9NRF2 756 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 KIF2AO00139 706 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 RALYLQ86SE5 291 aaKnown RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 LRRFIP2Q9Y608 721 aaKnown RBP19.11■□□□□ 0.65
SREBF1-201ENST00000261646 MBD5Q9P267 1494 aa19.1■□□□□ 0.65
SREBF1-201ENST00000261646 PTGS1P23219 599 aa19.1■□□□□ 0.65
SREBF1-201ENST00000261646 U2AF2P26368 475 aaKnown RBP eCLIP19.1■□□□□ 0.65
SREBF1-201ENST00000261646 DNM1Q05193 864 aaKnown RBP19.1■□□□□ 0.65
SREBF1-201ENST00000261646 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
SREBF1-201ENST00000261646 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
SREBF1-201ENST00000261646 FAM200AQ8TCP9 573 aa19.1■□□□□ 0.65
SREBF1-201ENST00000261646 PAXBP1Q9Y5B6 917 aa19.1■□□□□ 0.65
SREBF1-201ENST00000261646 PIBF1Q8WXW3 757 aa19.09■□□□□ 0.65
SREBF1-201ENST00000261646 DDX19AQ9NUU7 478 aaKnown RBP19.09■□□□□ 0.65
SREBF1-201ENST00000261646 GLRX3O76003 335 aaKnown RBP19.09■□□□□ 0.65
SREBF1-201ENST00000261646 ATP2B1P20020 1258 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms