RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 ITGB4P16144 1822 aa17.08■□□□□ 0.32
SEM1-201ENST00000248566 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
SEM1-201ENST00000248566 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
SEM1-201ENST00000248566 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
SEM1-201ENST00000248566 PIGBQ92521 554 aa17.07■□□□□ 0.32
SEM1-201ENST00000248566 LY75O60449 1722 aa17.07■□□□□ 0.32
SEM1-201ENST00000248566 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
SEM1-201ENST00000248566 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
SEM1-201ENST00000248566 HMOX1P09601 288 aa17.06■□□□□ 0.32
SEM1-201ENST00000248566 AMOTQ4VCS5 1084 aa17.06■□□□□ 0.32
SEM1-201ENST00000248566 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
SEM1-201ENST00000248566 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
SEM1-201ENST00000248566 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
SEM1-201ENST00000248566 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
SEM1-201ENST00000248566 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
SEM1-201ENST00000248566 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
SEM1-201ENST00000248566 MTFR1LQ9H019 292 aa17.02■□□□□ 0.32
SEM1-201ENST00000248566 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
SEM1-201ENST00000248566 CABP4P57796 275 aa17.01■□□□□ 0.31
SEM1-201ENST00000248566 CFAP53Q96M91 514 aa17.01■□□□□ 0.31
SEM1-201ENST00000248566 PLEKHG2Q9H7P9 1386 aa17.01■□□□□ 0.31
SEM1-201ENST00000248566 C5P01031 1676 aa17■□□□□ 0.31
SEM1-201ENST00000248566 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
SEM1-201ENST00000248566 KDRP35968 1356 aa17■□□□□ 0.31
SEM1-201ENST00000248566 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
SEM1-201ENST00000248566 SPDYE1Q8NFV5 336 aaPredicted RBP16.99■□□□□ 0.31
SEM1-201ENST00000248566 AK7Q96M32 723 aa16.99■□□□□ 0.31
SEM1-201ENST00000248566 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
SEM1-201ENST00000248566 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
SEM1-201ENST00000248566 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
SEM1-201ENST00000248566 HMGB2P26583 209 aaKnown RBP16.98■□□□□ 0.31
SEM1-201ENST00000248566 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
SEM1-201ENST00000248566 PTGER2P43116 358 aa16.98■□□□□ 0.31
SEM1-201ENST00000248566 SIK1P57059 783 aa16.98■□□□□ 0.31
SEM1-201ENST00000248566 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
SEM1-201ENST00000248566 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
SEM1-201ENST00000248566 KDM6AO15550 1401 aaPredicted RBP16.97■□□□□ 0.31
SEM1-201ENST00000248566 PHF14O94880 888 aa16.96■□□□□ 0.31
SEM1-201ENST00000248566 PRKAR2AP13861 404 aaKnown RBP16.96■□□□□ 0.31
SEM1-201ENST00000248566 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
SEM1-201ENST00000248566 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
SEM1-201ENST00000248566 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.31
SEM1-201ENST00000248566 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
SEM1-201ENST00000248566 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
SEM1-201ENST00000248566 QSER1Q2KHR3 1735 aa16.96■□□□□ 0.31
SEM1-201ENST00000248566 TAF1LQ8IZX4 1826 aa16.96■□□□□ 0.31
SEM1-201ENST00000248566 POLD1P28340 1107 aa16.96■□□□□ 0.3
SEM1-201ENST00000248566 ARXQ96QS3 562 aa16.96■□□□□ 0.3
SEM1-201ENST00000248566 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.3
SEM1-201ENST00000248566 C4BP0C0L5 1744 aa16.95■□□□□ 0.3
SEM1-201ENST00000248566 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
SEM1-201ENST00000248566 MSL1Q68DK7 614 aa16.95■□□□□ 0.3
SEM1-201ENST00000248566 SMIM5Q71RC9 77 aa16.95■□□□□ 0.3
SEM1-201ENST00000248566 LINC00116Q8NCU8 138 aa16.95■□□□□ 0.3
SEM1-201ENST00000248566 FHDC1Q9C0D6 1143 aaPredicted RBP16.95■□□□□ 0.3
SEM1-201ENST00000248566 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
SEM1-201ENST00000248566 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
SEM1-201ENST00000248566 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
SEM1-201ENST00000248566 ITPK1Q13572 414 aa16.94■□□□□ 0.3
SEM1-201ENST00000248566 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
SEM1-201ENST00000248566 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
SEM1-201ENST00000248566 GNPATO15228 680 aa16.92■□□□□ 0.3
SEM1-201ENST00000248566 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
SEM1-201ENST00000248566 U2AF1L5P0DN76 240 aaPredicted RBP16.92■□□□□ 0.3
SEM1-201ENST00000248566 U2AF1Q01081 240 aaKnown RBP eCLIP16.92■□□□□ 0.3
SEM1-201ENST00000248566 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
SEM1-201ENST00000248566 SGIP1Q9BQI5 828 aa16.92■□□□□ 0.3
SEM1-201ENST00000248566 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.91■□□□□ 0.3
SEM1-201ENST00000248566 SYT17Q9BSW7 474 aa16.91■□□□□ 0.3
SEM1-201ENST00000248566 SCN11AQ9UI33 1791 aa16.91■□□□□ 0.3
SEM1-201ENST00000248566 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
SEM1-201ENST00000248566 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
SEM1-201ENST00000248566 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
SEM1-201ENST00000248566 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
SEM1-201ENST00000248566 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
SEM1-201ENST00000248566 SLC39A6Q13433 755 aa16.88■□□□□ 0.29
SEM1-201ENST00000248566 VIRMAQ69YN4 1812 aaKnown RBP16.87■□□□□ 0.29
SEM1-201ENST00000248566 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
SEM1-201ENST00000248566 SSFA2P28290 1259 aa16.87■□□□□ 0.29
SEM1-201ENST00000248566 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
SEM1-201ENST00000248566 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
SEM1-201ENST00000248566 UBR3Q6ZT12 1888 aa16.86■□□□□ 0.29
SEM1-201ENST00000248566 TEFQ10587 303 aa16.86■□□□□ 0.29
SEM1-201ENST00000248566 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
SEM1-201ENST00000248566 MAP3K5Q99683 1374 aa16.86■□□□□ 0.29
SEM1-201ENST00000248566 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
SEM1-201ENST00000248566 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
SEM1-201ENST00000248566 C19orf67A6NJJ6 358 aa16.84■□□□□ 0.29
SEM1-201ENST00000248566 FCHSD2O94868 740 aa16.83■□□□□ 0.28
SEM1-201ENST00000248566 NEFMP07197 916 aa16.83■□□□□ 0.28
SEM1-201ENST00000248566 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
SEM1-201ENST00000248566 RFC4P35249 363 aa16.82■□□□□ 0.28
SEM1-201ENST00000248566 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
SEM1-201ENST00000248566 CRKLP46109 303 aaKnown RBP16.82■□□□□ 0.28
SEM1-201ENST00000248566 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
SEM1-201ENST00000248566 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
SEM1-201ENST00000248566 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
SEM1-201ENST00000248566 ZNF831Q5JPB2 1677 aa16.82■□□□□ 0.28
SEM1-201ENST00000248566 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
SEM1-201ENST00000248566 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms