RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 COL14A1Q05707 1796 aaKnown RBP22.83■■□□□ 1.24
KLHDC3-201ENST00000244670 IFNL2Q8IZJ0 200 aa22.82■■□□□ 1.24
KLHDC3-201ENST00000244670 CARD10Q9BWT7 1032 aa22.82■■□□□ 1.24
KLHDC3-201ENST00000244670 DDX19BQ9UMR2 479 aa22.82■■□□□ 1.24
KLHDC3-201ENST00000244670 CYP27B1O15528 508 aa22.82■■□□□ 1.24
KLHDC3-201ENST00000244670 SLC4A2P04920 1241 aa22.82■■□□□ 1.24
KLHDC3-201ENST00000244670 USP35Q9P2H5 1018 aa22.82■■□□□ 1.24
KLHDC3-201ENST00000244670 PCDHB15Q9Y5E8 787 aa22.8■■□□□ 1.24
KLHDC3-201ENST00000244670 ABCC4O15439 1325 aa22.8■■□□□ 1.24
KLHDC3-201ENST00000244670 IGHDP01880 384 aa22.8■■□□□ 1.24
KLHDC3-201ENST00000244670 EIF4A1P60842 406 aaKnown RBP22.8■■□□□ 1.24
KLHDC3-201ENST00000244670 API5Q9BZZ5 524 aaKnown RBP22.8■■□□□ 1.24
KLHDC3-201ENST00000244670 PLEKHG2Q9H7P9 1386 aa22.79■■□□□ 1.24
KLHDC3-201ENST00000244670 AAMPQ13685 434 aa22.79■■□□□ 1.24
KLHDC3-201ENST00000244670 IL2RBP14784 551 aa22.78■■□□□ 1.24
KLHDC3-201ENST00000244670 ADAMTS2O95450 1211 aa22.78■■□□□ 1.24
KLHDC3-201ENST00000244670 G2E3Q7L622 706 aa22.78■■□□□ 1.24
KLHDC3-201ENST00000244670 STK31Q9BXU1 1019 aa22.78■■□□□ 1.24
KLHDC3-201ENST00000244670 CCDC30Q5VVM6 783 aa22.77■■□□□ 1.24
KLHDC3-201ENST00000244670 RGS12O14924 1447 aa22.77■■□□□ 1.24
KLHDC3-201ENST00000244670 ZCRB1Q8TBF4 217 aaKnown RBP22.76■■□□□ 1.23
KLHDC3-201ENST00000244670 NUTM2BA6NNL0 878 aaPredicted RBP22.76■■□□□ 1.23
KLHDC3-201ENST00000244670 NUTM2EB1AL46 878 aaPredicted RBP22.76■■□□□ 1.23
KLHDC3-201ENST00000244670 NUTM2AQ8IVF1 878 aaPredicted RBP22.76■■□□□ 1.23
KLHDC3-201ENST00000244670 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
KLHDC3-201ENST00000244670 HDGFL1Q5TGJ6 251 aa22.75■■□□□ 1.23
KLHDC3-201ENST00000244670 DCAF5Q96JK2 942 aa22.75■■□□□ 1.23
KLHDC3-201ENST00000244670 PTPRCP08575 1304 aa22.75■■□□□ 1.23
KLHDC3-201ENST00000244670 SOS1Q07889 1333 aaPredicted RBP22.75■■□□□ 1.23
KLHDC3-201ENST00000244670 PCDH11XQ9BZA7 1347 aa22.75■■□□□ 1.23
KLHDC3-201ENST00000244670 PCDH11YQ9BZA8 1340 aa22.75■■□□□ 1.23
KLHDC3-201ENST00000244670 EIF2S2P20042 333 aaKnown RBP22.74■■□□□ 1.23
KLHDC3-201ENST00000244670 NFATC2IPQ8NCF5 419 aa22.74■■□□□ 1.23
KLHDC3-201ENST00000244670 SHANK3Q9BYB0 1731 aa22.74■■□□□ 1.23
KLHDC3-201ENST00000244670 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
KLHDC3-201ENST00000244670 SLC39A6Q13433 755 aa22.73■■□□□ 1.23
KLHDC3-201ENST00000244670 ZBTB40Q9NUA8 1239 aa22.73■■□□□ 1.23
KLHDC3-201ENST00000244670 CACNA1FO60840 1977 aa22.73■■□□□ 1.23
KLHDC3-201ENST00000244670 HSP90AB1P08238 724 aaKnown RBP22.72■■□□□ 1.23
KLHDC3-201ENST00000244670 DDX54Q8TDD1 881 aaKnown RBP22.72■■□□□ 1.23
KLHDC3-201ENST00000244670 MRC1P22897 1456 aa22.71■■□□□ 1.23
KLHDC3-201ENST00000244670 ZBTB7BO15156 539 aaPredicted RBP22.7■■□□□ 1.23
KLHDC3-201ENST00000244670 PRAMEF22A3QJZ6 481 aa22.7■■□□□ 1.22
KLHDC3-201ENST00000244670 F6X3S4 739 aa22.7■■□□□ 1.22
KLHDC3-201ENST00000244670 FLIIQ13045 1269 aa22.7■■□□□ 1.22
KLHDC3-201ENST00000244670 HOXB7P09629 217 aa22.69■■□□□ 1.22
KLHDC3-201ENST00000244670 ZNF790Q6PG37 636 aa22.69■■□□□ 1.22
KLHDC3-201ENST00000244670 C1orf115Q9H7X2 142 aa22.69■■□□□ 1.22
KLHDC3-201ENST00000244670 CABP4P57796 275 aa22.69■■□□□ 1.22
KLHDC3-201ENST00000244670 GIGYF1O75420 1035 aaPredicted RBP22.68■■□□□ 1.22
KLHDC3-201ENST00000244670 FKBP5Q13451 457 aaPredicted RBP22.68■■□□□ 1.22
KLHDC3-201ENST00000244670 INTS3Q68E01 1043 aaKnown RBP22.68■■□□□ 1.22
KLHDC3-201ENST00000244670 RWDD1Q9H446 243 aaPredicted RBP22.68■■□□□ 1.22
KLHDC3-201ENST00000244670 CHPF2Q9P2E5 772 aa22.68■■□□□ 1.22
KLHDC3-201ENST00000244670 HEG1Q9ULI3 1381 aa22.68■■□□□ 1.22
KLHDC3-201ENST00000244670 SLC4A10Q6U841 1118 aa22.67■■□□□ 1.22
KLHDC3-201ENST00000244670 PHAXQ9H814 394 aaKnown RBP22.67■■□□□ 1.22
KLHDC3-201ENST00000244670 NRAPQ86VF7 1730 aa22.67■■□□□ 1.22
KLHDC3-201ENST00000244670 PDE4AP27815 886 aa22.67■■□□□ 1.22
KLHDC3-201ENST00000244670 ANXA1P04083 346 aa22.66■■□□□ 1.22
KLHDC3-201ENST00000244670 C5P01031 1676 aa22.66■■□□□ 1.22
KLHDC3-201ENST00000244670 CERKQ8TCT0 537 aa22.65■■□□□ 1.22
KLHDC3-201ENST00000244670 CHMP4BQ9H444 224 aaKnown RBP22.65■■□□□ 1.22
KLHDC3-201ENST00000244670 BACH2Q9BYV9 841 aa22.65■■□□□ 1.22
KLHDC3-201ENST00000244670 RGS3P49796 1198 aa22.64■■□□□ 1.21
KLHDC3-201ENST00000244670 TTC5Q8N0Z6 440 aa22.64■■□□□ 1.21
KLHDC3-201ENST00000244670 DISP2A7MBM2 1401 aa22.64■■□□□ 1.21
KLHDC3-201ENST00000244670 ZNF496Q96IT1 587 aaPredicted RBP22.63■■□□□ 1.21
KLHDC3-201ENST00000244670 WNK3Q9BYP7 1800 aa22.63■■□□□ 1.21
KLHDC3-201ENST00000244670 NKX1-1Q15270 411 aaPredicted RBP22.63■■□□□ 1.21
KLHDC3-201ENST00000244670 TOGARAM1Q9Y4F4 1720 aa22.62■■□□□ 1.21
KLHDC3-201ENST00000244670 HDAC1Q13547 482 aaPredicted RBP22.61■■□□□ 1.21
KLHDC3-201ENST00000244670 CHMP4AQ9BY43 222 aa22.61■■□□□ 1.21
KLHDC3-201ENST00000244670 PROSER3Q2NL68 480 aa22.61■■□□□ 1.21
KLHDC3-201ENST00000244670 ERVV-2B6SEH9 535 aa22.6■■□□□ 1.21
KLHDC3-201ENST00000244670 JCADQ9P266 1359 aa22.6■■□□□ 1.21
KLHDC3-201ENST00000244670 CCT4P50991 539 aaKnown RBP22.59■■□□□ 1.21
KLHDC3-201ENST00000244670 MEIS3Q99687 375 aa22.59■■□□□ 1.21
KLHDC3-201ENST00000244670 DBF4Q9UBU7 674 aaPredicted RBP22.59■■□□□ 1.21
KLHDC3-201ENST00000244670 NWD2Q9ULI1 1742 aa22.59■■□□□ 1.21
KLHDC3-201ENST00000244670 SPATA31A1Q5TZJ5 1347 aa22.58■■□□□ 1.21
KLHDC3-201ENST00000244670 FMNL2Q96PY5 1086 aa22.58■■□□□ 1.21
KLHDC3-201ENST00000244670 SLIT2O94813 1529 aa22.58■■□□□ 1.2
KLHDC3-201ENST00000244670 PDZRN3Q9UPQ7 1066 aa22.57■■□□□ 1.2
KLHDC3-201ENST00000244670 MSH5O43196 834 aa22.57■■□□□ 1.2
KLHDC3-201ENST00000244670 C8orf37Q96NL8 207 aa22.57■■□□□ 1.2
KLHDC3-201ENST00000244670 CCDC9Q9Y3X0 531 aaKnown RBP22.57■■□□□ 1.2
KLHDC3-201ENST00000244670 N4BP2Q86UW6 1770 aaPredicted RBP22.57■■□□□ 1.2
KLHDC3-201ENST00000244670 GLI3P10071 1580 aa22.56■■□□□ 1.2
KLHDC3-201ENST00000244670 KAT6BQ8WYB5 2073 aa22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 EXOC5O00471 708 aa22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 SNRPA1P09661 255 aaKnown RBP22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 SIRT2Q8IXJ6 389 aa22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 PAPPAQ13219 1627 aa22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 PXDNLA1KZ92 1463 aa22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 ANP32EQ9BTT0 268 aa22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 USP16Q9Y5T5 823 aa22.55■■□□□ 1.2
KLHDC3-201ENST00000244670 UBR2Q8IWV8 1755 aa22.54■■□□□ 1.2
KLHDC3-201ENST00000244670 PI4KAP2A4QPH2 592 aa22.54■■□□□ 1.2
KLHDC3-201ENST00000244670 PI4KAP1Q8N8J0 262 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms