RNA–Protein interactions for RNA: ENST00000242839.8

ATP7B-201, Transcript of ATPase copper transporting beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP7B, Length 6,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-201ENST00000242839 IFFO1Q0D2I5 559 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 SPA17Q15506 151 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 SRRTQ9BXP5 876 aaKnown RBP13.19□□□□□ -0.3
ATP7B-201ENST00000242839 FANCIQ9NVI1 1328 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 TMCO5BA8MYB1 307 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 RANBP6O60518 1105 aaKnown RBP13.19□□□□□ -0.3
ATP7B-201ENST00000242839 MCM2P49736 904 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 VAT1LQ9HCJ6 419 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 PPP1R12BO60237 982 aaPredicted RBP13.19□□□□□ -0.3
ATP7B-201ENST00000242839 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
ATP7B-201ENST00000242839 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
ATP7B-201ENST00000242839 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
ATP7B-201ENST00000242839 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 TSG101Q99816 390 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 WWC3Q9ULE0 1092 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
ATP7B-201ENST00000242839 TMCO3Q6UWJ1 677 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 CCDC150Q8NCX0 1101 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 RNF187Q5TA31 235 aaPredicted RBP13.18□□□□□ -0.3
ATP7B-201ENST00000242839 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
ATP7B-201ENST00000242839 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
ATP7B-201ENST00000242839 MYD88Q99836 296 aa13.17□□□□□ -0.3
ATP7B-201ENST00000242839 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
ATP7B-201ENST00000242839 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
ATP7B-201ENST00000242839 SYCE3A1L190 88 aa13.17□□□□□ -0.3
ATP7B-201ENST00000242839 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
ATP7B-201ENST00000242839 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
ATP7B-201ENST00000242839 CUL5Q93034 780 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 CETN2P41208 172 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 SMTNL1A8MU46 457 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 CAVIN4Q5BKX8 364 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
ATP7B-201ENST00000242839 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
ATP7B-201ENST00000242839 BOLA2Q9H3K6 86 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 VTI1AQ96AJ9 217 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
ATP7B-201ENST00000242839 SAMM50Q9Y512 469 aa13.16□□□□□ -0.3
ATP7B-201ENST00000242839 FKBP15Q5T1M5 1219 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 LMAN1P49257 510 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
ATP7B-201ENST00000242839 MTERF4Q7Z6M4 381 aaKnown RBP13.15□□□□□ -0.3
ATP7B-201ENST00000242839 WASF1Q92558 559 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 CCDC7Q96M83 1385 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 POLR3GO15318 223 aaPredicted RBP13.15□□□□□ -0.3
ATP7B-201ENST00000242839 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 CRACR2AQ9BSW2 395 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
ATP7B-201ENST00000242839 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
ATP7B-201ENST00000242839 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
ATP7B-201ENST00000242839 CTNNA3Q9UI47 895 aa13.14□□□□□ -0.31
ATP7B-201ENST00000242839 EXOC6BQ9Y2D4 811 aa13.14□□□□□ -0.31
ATP7B-201ENST00000242839 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
ATP7B-201ENST00000242839 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
ATP7B-201ENST00000242839 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
ATP7B-201ENST00000242839 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
ATP7B-201ENST00000242839 CBX1P83916 185 aa13.14□□□□□ -0.31
ATP7B-201ENST00000242839 APBB1IPQ7Z5R6 666 aaPredicted RBP13.14□□□□□ -0.31
ATP7B-201ENST00000242839 CCT2P78371 535 aaKnown RBP13.13□□□□□ -0.31
ATP7B-201ENST00000242839 RGS22Q8NE09 1264 aa13.13□□□□□ -0.31
ATP7B-201ENST00000242839 PABPN1LA6NDY0 278 aaKnown RBP13.13□□□□□ -0.31
ATP7B-201ENST00000242839 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
ATP7B-201ENST00000242839 NLRP5P59047 1200 aa13.13□□□□□ -0.31
ATP7B-201ENST00000242839 SHTN1A0MZ66 631 aa13.13□□□□□ -0.31
ATP7B-201ENST00000242839 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
ATP7B-201ENST00000242839 PRC1O43663 620 aa13.13□□□□□ -0.31
ATP7B-201ENST00000242839 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
ATP7B-201ENST00000242839 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
ATP7B-201ENST00000242839 STARD3NLO95772 234 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 MCM10Q7L590 875 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 URI1O94763 535 aaPredicted RBP13.12□□□□□ -0.31
ATP7B-201ENST00000242839 NAPBQ9H115 298 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 BICD1Q96G01 975 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 FEZ1Q99689 392 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
ATP7B-201ENST00000242839 ATP2C2O75185 946 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 GPTP24298 496 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
ATP7B-201ENST00000242839 KIF20AO95235 890 aa13.11□□□□□ -0.31
ATP7B-201ENST00000242839 MAP3K11Q16584 847 aa13.11□□□□□ -0.31
ATP7B-201ENST00000242839 SYCP3Q8IZU3 236 aa13.11□□□□□ -0.31
ATP7B-201ENST00000242839 WIZO95785 1651 aa13.11□□□□□ -0.31
ATP7B-201ENST00000242839 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
ATP7B-201ENST00000242839 BIN1O00499 593 aa13.11□□□□□ -0.31
ATP7B-201ENST00000242839 UBXN4Q92575 508 aa13.11□□□□□ -0.31
ATP7B-201ENST00000242839 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
ATP7B-201ENST00000242839 THUMPD2Q9BTF0 503 aaKnown RBP13.11□□□□□ -0.31
ATP7B-201ENST00000242839 KIF5CO60282 957 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms