RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 MKNK2Q9HBH9 465 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 USO1O60763 962 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 BAG4O95429 457 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 DZIP1Q86YF9 867 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 KIF5CO60282 957 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 FAM107BQ9H098 131 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 DDX46Q7L014 1031 aaKnown RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 CCDC96Q2M329 555 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 CCDC14Q49A88 953 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 ESCO1Q5FWF5 840 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 CCDC117Q8IWD4 279 aaPredicted RBP8.74□□□□□ -1.01
PRDM2-201ENST00000235372 SPG7Q9UQ90 795 aa8.74□□□□□ -1.01
PRDM2-201ENST00000235372 APAF1O14727 1248 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 ZPR1O75312 459 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 PAFAH1B1P43034 410 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 NLRP6P59044 892 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 DDX54Q8TDD1 881 aaKnown RBP8.73□□□□□ -1.01
PRDM2-201ENST00000235372 UQCRHP07919 91 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 ZFP91Q96JP5 570 aaPredicted RBP8.73□□□□□ -1.01
PRDM2-201ENST00000235372 A0A1W2PRG0 241 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 MXRA7P84157 204 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 TMCO4Q5TGY1 634 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 ANKIB1Q9P2G1 1089 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 POLR3GO15318 223 aaPredicted RBP8.73□□□□□ -1.01
PRDM2-201ENST00000235372 SEPT6Q14141 434 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 CAVIN4Q5BKX8 364 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 CFAP58Q5T655 872 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 SPATA32Q96LK8 384 aa8.73□□□□□ -1.01
PRDM2-201ENST00000235372 PHAXQ9H814 394 aaKnown RBP8.73□□□□□ -1.01
PRDM2-201ENST00000235372 WDR33Q9C0J8 1336 aaKnown RBP8.73□□□□□ -1.01
PRDM2-201ENST00000235372 DHX57Q6P158 1386 aaKnown RBP8.73□□□□□ -1.01
PRDM2-201ENST00000235372 KIF4AO95239 1232 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 KIF5AQ12840 1032 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 TAF12Q16514 161 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 LARP1BQ659C4 914 aaKnown RBP8.72□□□□□ -1.01
PRDM2-201ENST00000235372 ALS2CR12Q96Q35 445 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 IQCGQ9H095 443 aaKnown RBP8.72□□□□□ -1.01
PRDM2-201ENST00000235372 SIL1Q9H173 461 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 SATB1Q01826 763 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 CFAP100Q494V2 611 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 SYCP3Q8IZU3 236 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 SMC1BQ8NDV3 1235 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 GMNNO75496 209 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 TTC12Q9H892 705 aaPredicted RBP8.72□□□□□ -1.01
PRDM2-201ENST00000235372 MICAL3Q7RTP6 2002 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 CCDC6Q16204 474 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 AIDAQ96BJ3 306 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 CCDC160A6NGH7 325 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 EXOC6Q8TAG9 804 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 FBF1Q8TES7 1133 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 UBXN4Q92575 508 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 HMGB1P1B2RPK0 211 aaPredicted RBP8.72□□□□□ -1.01
PRDM2-201ENST00000235372 ZSCAN12O43309 604 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 BICDL1Q6ZP65 573 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 CCDC83Q8IWF9 413 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 BICD1Q96G01 975 aa8.72□□□□□ -1.01
PRDM2-201ENST00000235372 BIRC2Q13490 618 aa8.71□□□□□ -1.01
PRDM2-201ENST00000235372 CCDC82Q8N4S0 544 aa8.71□□□□□ -1.01
PRDM2-201ENST00000235372 NOC2LQ9Y3T9 749 aaKnown RBP8.71□□□□□ -1.01
PRDM2-201ENST00000235372 ZBTB9Q96C00 473 aa8.71□□□□□ -1.01
PRDM2-201ENST00000235372 MYL6BP14649 208 aa8.71□□□□□ -1.02
PRDM2-201ENST00000235372 KRT32Q14532 448 aa8.71□□□□□ -1.02
PRDM2-201ENST00000235372 TRAK2O60296 914 aa8.71□□□□□ -1.02
PRDM2-201ENST00000235372 HLTFQ14527 1009 aaKnown RBP eCLIP8.71□□□□□ -1.024e-6■■■■□ 22.5
PRDM2-201ENST00000235372 CCDC174Q6PII3 467 aa8.71□□□□□ -1.02
PRDM2-201ENST00000235372 NCBP1Q09161 790 aaKnown RBP8.71□□□□□ -1.02
PRDM2-201ENST00000235372 PRC1O43663 620 aa8.71□□□□□ -1.02
PRDM2-201ENST00000235372 PLVAPQ9BX97 442 aa8.71□□□□□ -1.02
PRDM2-201ENST00000235372 SAMM50Q9Y512 469 aa8.71□□□□□ -1.02
PRDM2-201ENST00000235372 A0A087WZG4 1122 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 TDRD12Q587J7 1177 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 ZNF444Q8N0Y2 327 aaPredicted RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 PNISRQ8TF01 805 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 TTC36A6NLP5 189 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 PRPF4BQ13523 1007 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 ST20-MTHFSA0A0A6YYL1 179 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 BLOC1S2Q6QNY1 142 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 ATF7IPQ6VMQ6 1270 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 CACYBPQ9HB71 228 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 SEPT10Q9P0V9 454 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 KIF2AO00139 706 aaPredicted RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 DYNC1I1O14576 645 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 NUP88Q99567 741 aaPredicted RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 ABCF2Q9UG63 623 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC196A0A1B0GTZ2 297 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 GAS8O95995 478 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC172P0C7W6 258 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 RPUSD2Q8IZ73 545 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 SPINK5Q9NQ38 1064 aaPredicted RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 IFI16Q16666 785 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 RPGRQ92834 1020 aaKnown RBP8.7□□□□□ -1.02
PRDM2-201ENST00000235372 TSHZ2Q9NRE2 1034 aa8.7□□□□□ -1.02
PRDM2-201ENST00000235372 DNA2P51530 1060 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 TBC1D5Q92609 795 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 SRCIN1Q9C0H9 1055 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC155Q8N6L0 562 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms