RNA–Protein interactions for RNA: ENST00000229201.4

TIMELESS-201, Transcript of timeless circadian regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TIMELESS, Length 4,376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-201ENST00000229201 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
TIMELESS-201ENST00000229201 OTUD7AQ8TE49 926 aaPredicted RBP12.37□□□□□ -0.43
TIMELESS-201ENST00000229201 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 GOLGA6L22H0YM25 854 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 ST18O60284 1047 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 GCP02774 474 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 PTMSP20962 102 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 AKAP4Q5JQC9 854 aa12.36□□□□□ -0.43
TIMELESS-201ENST00000229201 BTBD11A6QL63 1104 aa12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 ERC2O15083 957 aa12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 XPCQ01831 940 aaPredicted RBP12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 HOXB7P09629 217 aa12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 PDE1AP54750 535 aa12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 MCCP23508 829 aa12.35□□□□□ -0.43
TIMELESS-201ENST00000229201 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
TIMELESS-201ENST00000229201 HDAC5Q9UQL6 1122 aa12.34□□□□□ -0.43
TIMELESS-201ENST00000229201 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
TIMELESS-201ENST00000229201 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
TIMELESS-201ENST00000229201 TRAK2O60296 914 aa12.34□□□□□ -0.43
TIMELESS-201ENST00000229201 USP26Q9BXU7 913 aa12.34□□□□□ -0.43
TIMELESS-201ENST00000229201 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 MX1P20591 662 aa12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 LRRC59Q96AG4 307 aaKnown RBP12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 LGR6Q9HBX8 967 aa12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 RILPL2Q969X0 211 aa12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 KIF2CQ99661 725 aa12.33□□□□□ -0.44
TIMELESS-201ENST00000229201 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 GOLGA6L3A6NEY3 463 aa12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 SURF6O75683 361 aaKnown RBP12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 HSP90AB4PQ58FF6 505 aa12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 USP44Q9H0E7 712 aa12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 PHAXQ9H814 394 aaKnown RBP12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 RIMS1Q86UR5 1692 aaKnown RBP12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 RAB11FIP3O75154 756 aa12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 OS9Q13438 667 aaPredicted RBP12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
TIMELESS-201ENST00000229201 DBF4Q9UBU7 674 aaPredicted RBP12.31□□□□□ -0.44
TIMELESS-201ENST00000229201 PNMA6EA0A0J9YXQ4 647 aa12.31□□□□□ -0.44
TIMELESS-201ENST00000229201 ATF3P18847 181 aa12.31□□□□□ -0.44
TIMELESS-201ENST00000229201 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
TIMELESS-201ENST00000229201 CHPF2Q9P2E5 772 aa12.31□□□□□ -0.44
TIMELESS-201ENST00000229201 TNPO1Q92973 898 aaKnown RBP12.31□□□□□ -0.44
TIMELESS-201ENST00000229201 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 BRPF3Q9ULD4 1205 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 PI4KAP2A4QPH2 592 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 SRGAP3O43295 1099 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 PI4KAP1Q8N8J0 262 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 ARXQ96QS3 562 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 C19orf44Q9H6X5 657 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 C9orf78Q9NZ63 289 aaPredicted RBP12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 NUCB2P80303 420 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 PPP1R42Q7Z4L9 355 aa12.3□□□□□ -0.44
TIMELESS-201ENST00000229201 RNMTO43148 476 aaKnown RBP12.29□□□□□ -0.44
TIMELESS-201ENST00000229201 RAB3GAP1Q15042 981 aa12.29□□□□□ -0.44
TIMELESS-201ENST00000229201 IBTKQ9P2D0 1353 aaPredicted RBP12.29□□□□□ -0.44
TIMELESS-201ENST00000229201 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
TIMELESS-201ENST00000229201 NCOA3Q9Y6Q9 1424 aa12.29□□□□□ -0.44
TIMELESS-201ENST00000229201 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
TIMELESS-201ENST00000229201 ANO2Q9NQ90 1003 aa12.29□□□□□ -0.44
TIMELESS-201ENST00000229201 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 CSB-PGBD3P0DP91 1061 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 SSH3Q8TE77 659 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 IL1RAPL2Q9NP60 686 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 KIF1BPQ96EK5 621 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 ZC3H6P61129 1189 aaKnown RBP12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 TSHZ3Q63HK5 1081 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 NWD1Q149M9 1564 aa12.28□□□□□ -0.44
TIMELESS-201ENST00000229201 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.44
TIMELESS-201ENST00000229201 DDIT3P35638 169 aa12.27□□□□□ -0.45
TIMELESS-201ENST00000229201 MCM2P49736 904 aa12.27□□□□□ -0.45
TIMELESS-201ENST00000229201 KCNQ3O43525 872 aa12.27□□□□□ -0.45
TIMELESS-201ENST00000229201 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
TIMELESS-201ENST00000229201 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
TIMELESS-201ENST00000229201 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 STAP2Q9UGK3 403 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 AOX1Q06278 1338 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 CHD2O14647 1828 aaKnown RBP12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 ANXA1P04083 346 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 NEK4P51957 841 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 RHPN1Q8TCX5 695 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 GPATCH3Q96I76 525 aa12.26□□□□□ -0.45
TIMELESS-201ENST00000229201 ALDH1L1O75891 902 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms