RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 PTPRCP08575 1304 aa21.48■■□□□ 1.03
PRPF19-201ENST00000227524 NLRP6P59044 892 aa21.48■■□□□ 1.03
PRPF19-201ENST00000227524 ZNF445P59923 1031 aa21.48■■□□□ 1.03
PRPF19-201ENST00000227524 HSPA2P54652 639 aa21.47■■□□□ 1.03
PRPF19-201ENST00000227524 CWC22Q9HCG8 908 aaKnown RBP21.47■■□□□ 1.03
PRPF19-201ENST00000227524 LMBRD1Q9NUN5 540 aa21.47■■□□□ 1.03
PRPF19-201ENST00000227524 ESCO1Q5FWF5 840 aa21.47■■□□□ 1.03
PRPF19-201ENST00000227524 NUTM2GQ5VZR2 741 aa21.47■■□□□ 1.03
PRPF19-201ENST00000227524 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
PRPF19-201ENST00000227524 MEIS3Q99687 375 aa21.47■■□□□ 1.03
PRPF19-201ENST00000227524 ST18O60284 1047 aa21.46■■□□□ 1.03
PRPF19-201ENST00000227524 PKP1Q13835 747 aa21.46■■□□□ 1.03
PRPF19-201ENST00000227524 C14orf37Q86TY3 774 aa21.46■■□□□ 1.03
PRPF19-201ENST00000227524 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
PRPF19-201ENST00000227524 SBNO1A3KN83 1393 aa21.46■■□□□ 1.03
PRPF19-201ENST00000227524 APBB1O00213 710 aa21.46■■□□□ 1.03
PRPF19-201ENST00000227524 FLT4P35916 1363 aa21.45■■□□□ 1.02
PRPF19-201ENST00000227524 MCM10Q7L590 875 aa21.45■■□□□ 1.02
PRPF19-201ENST00000227524 ABTB2Q8N961 1025 aa21.45■■□□□ 1.02
PRPF19-201ENST00000227524 ANP32BQ92688 251 aaKnown RBP21.45■■□□□ 1.02
PRPF19-201ENST00000227524 ORAI2Q96SN7 254 aa21.45■■□□□ 1.02
PRPF19-201ENST00000227524 REC8O95072 547 aa21.44■■□□□ 1.02
PRPF19-201ENST00000227524 CAVIN1Q6NZI2 390 aaKnown RBP21.44■■□□□ 1.02
PRPF19-201ENST00000227524 ZSCAN23Q3MJ62 389 aa21.44■■□□□ 1.02
PRPF19-201ENST00000227524 ZGPATQ8N5A5 531 aaKnown RBP21.43■■□□□ 1.02
PRPF19-201ENST00000227524 TUBGCP6Q96RT7 1819 aa21.43■■□□□ 1.02
PRPF19-201ENST00000227524 NCLP19338 710 aaKnown RBP21.43■■□□□ 1.02
PRPF19-201ENST00000227524 ERC2O15083 957 aa21.42■■□□□ 1.02
PRPF19-201ENST00000227524 CRB1P82279 1406 aa21.42■■□□□ 1.02
PRPF19-201ENST00000227524 ZSCAN30Q86W11 494 aa21.41■■□□□ 1.02
PRPF19-201ENST00000227524 ZDHHC9Q9Y397 364 aa21.41■■□□□ 1.02
PRPF19-201ENST00000227524 C19orf44Q9H6X5 657 aa21.4■■□□□ 1.02
PRPF19-201ENST00000227524 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
PRPF19-201ENST00000227524 HMMRO75330 724 aa21.4■■□□□ 1.02
PRPF19-201ENST00000227524 OSBPL3Q9H4L5 887 aa21.4■■□□□ 1.02
PRPF19-201ENST00000227524 TMEM94Q12767 1356 aa21.4■■□□□ 1.02
PRPF19-201ENST00000227524 RRP9O43818 475 aaKnown RBP21.39■■□□□ 1.01
PRPF19-201ENST00000227524 NFAT5O94916 1531 aa21.39■■□□□ 1.01
PRPF19-201ENST00000227524 STRCQ7RTU9 1775 aa21.39■■□□□ 1.01
PRPF19-201ENST00000227524 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
PRPF19-201ENST00000227524 PSME1Q06323 249 aa21.38■■□□□ 1.01
PRPF19-201ENST00000227524 ARHGEF10O15013 1369 aa21.38■■□□□ 1.01
PRPF19-201ENST00000227524 LTN1O94822 1766 aa21.38■■□□□ 1.01
PRPF19-201ENST00000227524 FOXO3O43524 673 aa21.38■■□□□ 1.01
PRPF19-201ENST00000227524 HSP90AA2PQ14568 343 aaPredicted RBP21.38■■□□□ 1.01
PRPF19-201ENST00000227524 GPT2Q8TD30 523 aa21.38■■□□□ 1.01
PRPF19-201ENST00000227524 TRPM3Q9HCF6 1732 aaPredicted RBP21.38■■□□□ 1.01
PRPF19-201ENST00000227524 PRPF40AO75400 957 aaKnown RBP21.37■■□□□ 1.01
PRPF19-201ENST00000227524 TPM2P07951 284 aa21.37■■□□□ 1.01
PRPF19-201ENST00000227524 AMPHP49418 695 aa21.37■■□□□ 1.01
PRPF19-201ENST00000227524 PDE1AP54750 535 aa21.37■■□□□ 1.01
PRPF19-201ENST00000227524 RBSNQ9H1K0 784 aa21.37■■□□□ 1.01
PRPF19-201ENST00000227524 KDRP35968 1356 aa21.37■■□□□ 1.01
PRPF19-201ENST00000227524 HOXC9P31274 260 aa21.37■■□□□ 1.01
PRPF19-201ENST00000227524 MST1RQ04912 1400 aa21.35■■□□□ 1.01
PRPF19-201ENST00000227524 KIF1AQ12756 1690 aa21.35■■□□□ 1.01
PRPF19-201ENST00000227524 IGSF1Q8N6C5 1336 aa21.35■■□□□ 1.01
PRPF19-201ENST00000227524 CCT4P50991 539 aaKnown RBP21.35■■□□□ 1.01
PRPF19-201ENST00000227524 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
PRPF19-201ENST00000227524 G2E3Q7L622 706 aa21.35■■□□□ 1.01
PRPF19-201ENST00000227524 RBM27Q9P2N5 1060 aaKnown RBP21.35■■□□□ 1.01
PRPF19-201ENST00000227524 MSNP26038 577 aaKnown RBP21.34■■□□□ 1.01
PRPF19-201ENST00000227524 EYA1Q99502 592 aa21.34■■□□□ 1.01
PRPF19-201ENST00000227524 PRIM1P49642 420 aaKnown RBP21.34■■□□□ 1.01
PRPF19-201ENST00000227524 HS1BP3Q53T59 392 aa21.34■■□□□ 1.01
PRPF19-201ENST00000227524 SLC4A10Q6U841 1118 aa21.34■■□□□ 1.01
PRPF19-201ENST00000227524 XIRP1Q702N8 1843 aaKnown RBP21.33■■□□□ 1.01
PRPF19-201ENST00000227524 F6X3S4 739 aa21.33■■□□□ 1.01
PRPF19-201ENST00000227524 PDLIM2Q96JY6 352 aa21.33■■□□□ 1.01
PRPF19-201ENST00000227524 MIS18AQ9NYP9 233 aa21.33■■□□□ 1.01
PRPF19-201ENST00000227524 SALL3Q9BXA9 1300 aa21.33■■□□□ 1
PRPF19-201ENST00000227524 DCCP43146 1447 aa21.33■■□□□ 1
PRPF19-201ENST00000227524 FAM208AQ9UK61 1670 aaKnown RBP21.32■■□□□ 1
PRPF19-201ENST00000227524 OFD1O75665 1012 aa21.32■■□□□ 1
PRPF19-201ENST00000227524 KIAA1211Q6ZU35 1233 aa21.32■■□□□ 1
PRPF19-201ENST00000227524 NEK4P51957 841 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 TMX3Q96JJ7 454 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
PRPF19-201ENST00000227524 GLIPR1L2Q4G1C9 344 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 CHAMP1Q96JM3 812 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 ESYT1Q9BSJ8 1104 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 TMEM63CQ9P1W3 806 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 TSPYL4Q9UJ04 414 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 SLIT3O75094 1523 aa21.31■■□□□ 1
PRPF19-201ENST00000227524 GNAI2P04899 355 aa21.3■■□□□ 1
PRPF19-201ENST00000227524 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
PRPF19-201ENST00000227524 MCM2P49736 904 aa21.3■■□□□ 1
PRPF19-201ENST00000227524 LRSAM1Q6UWE0 723 aa21.3■■□□□ 1
PRPF19-201ENST00000227524 N4BP2Q86UW6 1770 aaPredicted RBP21.29■■□□□ 1
PRPF19-201ENST00000227524 TSHZ3Q63HK5 1081 aa21.29■■□□□ 1
PRPF19-201ENST00000227524 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.29■■□□□ 1
PRPF19-201ENST00000227524 NSFL1CQ9UNZ2 370 aaKnown RBP21.29■■□□□ 1
PRPF19-201ENST00000227524 ALS2Q96Q42 1657 aa21.28■■□□□ 1
PRPF19-201ENST00000227524 CUL4AQ13619 759 aa21.28■■□□□ 1
PRPF19-201ENST00000227524 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
PRPF19-201ENST00000227524 NOL7Q9UMY1 257 aaKnown RBP21.28■■□□□ 1
PRPF19-201ENST00000227524 LRRC37A3O60309 1634 aa21.28■■□□□ 1
PRPF19-201ENST00000227524 ATF3P18847 181 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 MCCP23508 829 aa21.27■■□□□ 1
PRPF19-201ENST00000227524 FOXD4L5Q5VV16 416 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms