RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 C16orf71Q8IYS4 520 aaPredicted RBP25.94■■□□□ 1.74
CCDC130-201ENST00000221554 HOXB7P09629 217 aa25.93■■□□□ 1.74
CCDC130-201ENST00000221554 USP26Q9BXU7 913 aa25.93■■□□□ 1.74
CCDC130-201ENST00000221554 SDSP20132 328 aa25.92■■□□□ 1.74
CCDC130-201ENST00000221554 ADGRL3Q9HAR2 1447 aa25.92■■□□□ 1.74
CCDC130-201ENST00000221554 F6X3S4 739 aa25.92■■□□□ 1.74
CCDC130-201ENST00000221554 ATP8B2P98198 1209 aa25.92■■□□□ 1.74
CCDC130-201ENST00000221554 NUTM2GQ5VZR2 741 aa25.92■■□□□ 1.74
CCDC130-201ENST00000221554 N4BP2Q86UW6 1770 aaPredicted RBP25.91■■□□□ 1.74
CCDC130-201ENST00000221554 CEMIPQ8WUJ3 1361 aa25.9■■□□□ 1.74
CCDC130-201ENST00000221554 PHRF1Q9P1Y6 1649 aaKnown RBP25.9■■□□□ 1.74
CCDC130-201ENST00000221554 RAB3GAP1Q15042 981 aa25.9■■□□□ 1.74
CCDC130-201ENST00000221554 TRAK2O60296 914 aa25.9■■□□□ 1.74
CCDC130-201ENST00000221554 PSME1Q06323 249 aa25.9■■□□□ 1.74
CCDC130-201ENST00000221554 C14orf37Q86TY3 774 aa25.9■■□□□ 1.74
CCDC130-201ENST00000221554 SRCIN1Q9C0H9 1055 aa25.9■■□□□ 1.74
CCDC130-201ENST00000221554 NFAT5O94916 1531 aa25.89■■□□□ 1.74
CCDC130-201ENST00000221554 SKOR2Q2VWA4 1001 aaPredicted RBP25.89■■□□□ 1.73
CCDC130-201ENST00000221554 RBM33Q96EV2 1170 aaKnown RBP25.89■■□□□ 1.73
CCDC130-201ENST00000221554 ISY1Q9ULR0 285 aaKnown RBP25.89■■□□□ 1.73
CCDC130-201ENST00000221554 LTN1O94822 1766 aa25.89■■□□□ 1.73
CCDC130-201ENST00000221554 PDE1AP54750 535 aa25.88■■□□□ 1.73
CCDC130-201ENST00000221554 LTV1Q96GA3 475 aaPredicted RBP25.88■■□□□ 1.73
CCDC130-201ENST00000221554 LRRCC1Q9C099 1032 aa25.88■■□□□ 1.73
CCDC130-201ENST00000221554 SMARCA5O60264 1052 aaPredicted RBP25.87■■□□□ 1.73
CCDC130-201ENST00000221554 ERC2O15083 957 aa25.87■■□□□ 1.73
CCDC130-201ENST00000221554 IL27Q8NEV9 243 aa25.87■■□□□ 1.73
CCDC130-201ENST00000221554 HDGFL1Q5TGJ6 251 aa25.85■■□□□ 1.73
CCDC130-201ENST00000221554 OTUD7AQ8TE49 926 aaPredicted RBP25.85■■□□□ 1.73
CCDC130-201ENST00000221554 TNPO1Q92973 898 aaKnown RBP25.85■■□□□ 1.73
CCDC130-201ENST00000221554 ST18O60284 1047 aa25.84■■□□□ 1.73
CCDC130-201ENST00000221554 AMOTQ4VCS5 1084 aa25.84■■□□□ 1.73
CCDC130-201ENST00000221554 BRPF3Q9ULD4 1205 aa25.84■■□□□ 1.73
CCDC130-201ENST00000221554 GOLGA6L3A6NEY3 463 aa25.84■■□□□ 1.73
CCDC130-201ENST00000221554 PLEKHO1Q53GL0 409 aaPredicted RBP25.84■■□□□ 1.73
CCDC130-201ENST00000221554 CLEC17AQ6ZS10 378 aa25.84■■□□□ 1.73
CCDC130-201ENST00000221554 AOX1Q06278 1338 aa25.84■■□□□ 1.73
CCDC130-201ENST00000221554 MED1Q15648 1581 aaPredicted RBP25.84■■□□□ 1.73
CCDC130-201ENST00000221554 APBB1O00213 710 aa25.83■■□□□ 1.73
CCDC130-201ENST00000221554 AKAP4Q5JQC9 854 aa25.83■■□□□ 1.73
CCDC130-201ENST00000221554 IBTKQ9P2D0 1353 aaPredicted RBP25.83■■□□□ 1.73
CCDC130-201ENST00000221554 UBTFL1P0CB47 393 aaPredicted RBP25.82■■□□□ 1.72
CCDC130-201ENST00000221554 ESCO1Q5FWF5 840 aa25.82■■□□□ 1.72
CCDC130-201ENST00000221554 CWC22Q9HCG8 908 aaKnown RBP25.82■■□□□ 1.72
CCDC130-201ENST00000221554 SALL3Q9BXA9 1300 aa25.82■■□□□ 1.72
CCDC130-201ENST00000221554 RAB11FIP3O75154 756 aa25.82■■□□□ 1.72
CCDC130-201ENST00000221554 STAP2Q9UGK3 403 aa25.82■■□□□ 1.72
CCDC130-201ENST00000221554 OVOS2A0A0G2JMS6 1433 aa25.81■■□□□ 1.72
CCDC130-201ENST00000221554 NCAPD2Q15021 1401 aa25.81■■□□□ 1.72
CCDC130-201ENST00000221554 FSD2A1L4K1 749 aa25.81■■□□□ 1.72
CCDC130-201ENST00000221554 GOLGA6L22H0YM25 854 aa25.81■■□□□ 1.72
CCDC130-201ENST00000221554 CD2BP2O95400 341 aaKnown RBP25.81■■□□□ 1.72
CCDC130-201ENST00000221554 EPB41L2O43491 1005 aaKnown RBP25.8■■□□□ 1.72
CCDC130-201ENST00000221554 EIF4A1P60842 406 aaKnown RBP25.8■■□□□ 1.72
CCDC130-201ENST00000221554 NUCB2P80303 420 aa25.8■■□□□ 1.72
CCDC130-201ENST00000221554 NBPF6Q5VWK0 638 aa25.8■■□□□ 1.72
CCDC130-201ENST00000221554 NBPF4Q96M43 638 aa25.8■■□□□ 1.72
CCDC130-201ENST00000221554 RBM42Q9BTD8 480 aaKnown RBP25.8■■□□□ 1.72
CCDC130-201ENST00000221554 PROSER2Q86WR7 435 aaPredicted RBP25.79■■□□□ 1.72
CCDC130-201ENST00000221554 USP44Q9H0E7 712 aa25.79■■□□□ 1.72
CCDC130-201ENST00000221554 MX1P20591 662 aa25.79■■□□□ 1.72
CCDC130-201ENST00000221554 LMO7Q8WWI1 1683 aa25.78■■□□□ 1.72
CCDC130-201ENST00000221554 SSH3Q8TE77 659 aa25.78■■□□□ 1.72
CCDC130-201ENST00000221554 EXOC6BQ9Y2D4 811 aa25.78■■□□□ 1.72
CCDC130-201ENST00000221554 TMEM94Q12767 1356 aa25.78■■□□□ 1.72
CCDC130-201ENST00000221554 MCCP23508 829 aa25.77■■□□□ 1.72
CCDC130-201ENST00000221554 TEFQ10587 303 aa25.77■■□□□ 1.72
CCDC130-201ENST00000221554 HDAC5Q9UQL6 1122 aa25.77■■□□□ 1.72
CCDC130-201ENST00000221554 LRRFIP2Q9Y608 721 aaKnown RBP25.77■■□□□ 1.72
CCDC130-201ENST00000221554 KDM3BQ7LBC6 1761 aa25.77■■□□□ 1.72
CCDC130-201ENST00000221554 MCM2P49736 904 aa25.77■■□□□ 1.72
CCDC130-201ENST00000221554 USHBP1Q8N6Y0 703 aa25.77■■□□□ 1.72
CCDC130-201ENST00000221554 SLIT3O75094 1523 aa25.76■■□□□ 1.71
CCDC130-201ENST00000221554 PNMA6EA0A0J9YXQ4 647 aa25.76■■□□□ 1.71
CCDC130-201ENST00000221554 NECTIN2Q92692 538 aa25.76■■□□□ 1.71
CCDC130-201ENST00000221554 HSP90AB4PQ58FF6 505 aa25.74■■□□□ 1.71
CCDC130-201ENST00000221554 ARHGEF25Q86VW2 580 aa25.74■■□□□ 1.71
CCDC130-201ENST00000221554 MRE11P49959 708 aa25.74■■□□□ 1.71
CCDC130-201ENST00000221554 ANAPC15P60006 121 aa25.74■■□□□ 1.71
CCDC130-201ENST00000221554 ZNF530Q6P9A1 599 aaPredicted RBP25.74■■□□□ 1.71
CCDC130-201ENST00000221554 GCP02774 474 aa25.73■■□□□ 1.71
CCDC130-201ENST00000221554 C1orf141Q5JVX7 400 aa25.73■■□□□ 1.71
CCDC130-201ENST00000221554 BTBD11A6QL63 1104 aa25.72■■□□□ 1.71
CCDC130-201ENST00000221554 POLA2Q14181 598 aa25.72■■□□□ 1.71
CCDC130-201ENST00000221554 ESYT1Q9BSJ8 1104 aa25.72■■□□□ 1.71
CCDC130-201ENST00000221554 DNAAF4Q8WXU2 420 aa25.72■■□□□ 1.71
CCDC130-201ENST00000221554 FAM43AQ8N2R8 423 aa25.71■■□□□ 1.71
CCDC130-201ENST00000221554 PHAXQ9H814 394 aaKnown RBP25.71■■□□□ 1.71
CCDC130-201ENST00000221554 LGR6Q9HBX8 967 aa25.71■■□□□ 1.71
CCDC130-201ENST00000221554 DBF4Q9UBU7 674 aaPredicted RBP25.7■■□□□ 1.7
CCDC130-201ENST00000221554 TUBGCP6Q96RT7 1819 aa25.7■■□□□ 1.7
CCDC130-201ENST00000221554 IL17RAQ96F46 866 aa25.69■■□□□ 1.7
CCDC130-201ENST00000221554 MST1RQ04912 1400 aa25.69■■□□□ 1.7
CCDC130-201ENST00000221554 RNMTO43148 476 aaKnown RBP25.69■■□□□ 1.7
CCDC130-201ENST00000221554 EIF2S2P20042 333 aaKnown RBP25.69■■□□□ 1.7
CCDC130-201ENST00000221554 KIF1BPQ96EK5 621 aa25.69■■□□□ 1.7
CCDC130-201ENST00000221554 GZF1Q9H116 711 aaPredicted RBP25.69■■□□□ 1.7
CCDC130-201ENST00000221554 CHMLP26374 656 aa25.68■■□□□ 1.7
CCDC130-201ENST00000221554 BEND3Q5T5X7 828 aa25.68■■□□□ 1.7
CCDC130-201ENST00000221554 FOXD4L1Q9NU39 408 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms