RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 RGS22Q8NE09 1264 aa16.94■□□□□ 0.3
SPTLC2-201ENST00000216484 ODF2LQ9ULJ1 636 aa16.94■□□□□ 0.3
SPTLC2-201ENST00000216484 TRMT1Q9NXH9 659 aaKnown RBP16.93■□□□□ 0.3
SPTLC2-201ENST00000216484 PRKCSHP14314 528 aaPredicted RBP16.93■□□□□ 0.3
SPTLC2-201ENST00000216484 AAMPQ13685 434 aa16.93■□□□□ 0.3
SPTLC2-201ENST00000216484 WDR78Q5VTH9 848 aa16.93■□□□□ 0.3
SPTLC2-201ENST00000216484 WASF1Q92558 559 aa16.93■□□□□ 0.3
SPTLC2-201ENST00000216484 ALS2CR12Q96Q35 445 aa16.93■□□□□ 0.3
SPTLC2-201ENST00000216484 CWC27Q6UX04 472 aaKnown RBP16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 PUF60Q9UHX1 559 aaKnown RBP16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 ZNF354CQ86Y25 554 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 ANKS4BQ8N8V4 417 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 WDR66Q8TBY9 1149 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 HSF2BPO75031 334 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 PPP4R3BQ5MIZ7 849 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 CUX2O14529 1486 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 VGFO15240 615 aaPredicted RBP16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
SPTLC2-201ENST00000216484 TMCO4Q5TGY1 634 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 ANAPC4Q9UJX5 808 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 CEP83Q9Y592 693 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 SH3BP5O60239 455 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 IQCGQ9H095 443 aaKnown RBP16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 LIG1P18858 919 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 CA8P35219 290 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 OTUD6BQ8N6M0 293 aa16.91■□□□□ 0.3
SPTLC2-201ENST00000216484 DZIP1Q86YF9 867 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 CARMIL1Q5VZK9 1371 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 KIF4AO95239 1232 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 MYL6BP14649 208 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 SMC1BQ8NDV3 1235 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 FAM184BQ9ULE4 1060 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 RPUSD2Q8IZ73 545 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 CCDC18Q5T9S5 1454 aa16.9■□□□□ 0.3
SPTLC2-201ENST00000216484 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
SPTLC2-201ENST00000216484 CCDC155Q8N6L0 562 aa16.89■□□□□ 0.29
SPTLC2-201ENST00000216484 FEZ2Q9UHY8 353 aaPredicted RBP16.89■□□□□ 0.29
SPTLC2-201ENST00000216484 ACTN2P35609 894 aa16.89■□□□□ 0.29
SPTLC2-201ENST00000216484 SATB1Q01826 763 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 SLU7O95391 586 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 ZBTB16Q05516 673 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 CCDC63Q8NA47 563 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 SF3B2Q13435 895 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 EPSTI1Q96J88 318 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 CETN1Q12798 172 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-201ENST00000216484 NDC80O14777 642 aa16.87■□□□□ 0.29
SPTLC2-201ENST00000216484 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
SPTLC2-201ENST00000216484 NSRP1Q9H0G5 558 aaKnown RBP16.87■□□□□ 0.29
SPTLC2-201ENST00000216484 POTEB2H3BUK9 544 aa16.87■□□□□ 0.29
SPTLC2-201ENST00000216484 AACSQ86V21 672 aa16.87■□□□□ 0.29
SPTLC2-201ENST00000216484 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
SPTLC2-201ENST00000216484 CEP57Q86XR8 500 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 LRRC45Q96CN5 670 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 NAA25Q14CX7 972 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 ANO10Q9NW15 660 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 YEATS4O95619 227 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 SYNCQ9H7C4 482 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 GCC1Q96CN9 775 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 PPP1R9BQ96SB3 815 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 CKAP4Q07065 602 aaKnown RBP16.86■□□□□ 0.29
SPTLC2-201ENST00000216484 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 SMC6Q96SB8 1091 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 CTNNA3Q9UI47 895 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 MIPOL1Q8TD10 442 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 PDZRN3Q9UPQ7 1066 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 KIAA0753Q2KHM9 967 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 STRN4Q9NRL3 753 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 SYCP3Q8IZU3 236 aa16.85■□□□□ 0.29
SPTLC2-201ENST00000216484 TRMT1LQ7Z2T5 733 aaKnown RBP16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 RRBP1Q9P2E9 1410 aaKnown RBP16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 PRC1O43663 620 aa16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 TCERG1LQ5VWI1 586 aa16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 CEP120Q8N960 986 aa16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 CPSF2Q9P2I0 782 aaKnown RBP16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
SPTLC2-201ENST00000216484 MTIF2P46199 727 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms