RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
PDZD4-201ENST00000164640 NRBP1Q9UHY1 535 aa17.97■□□□□ 0.47
PDZD4-201ENST00000164640 VGFO15240 615 aaPredicted RBP17.97■□□□□ 0.47
PDZD4-201ENST00000164640 MAP3K11Q16584 847 aa17.97■□□□□ 0.47
PDZD4-201ENST00000164640 FAM173BQ6P4H8 233 aa17.97■□□□□ 0.47
PDZD4-201ENST00000164640 TAOK2Q9UL54 1235 aa17.97■□□□□ 0.47
PDZD4-201ENST00000164640 NCBP1Q09161 790 aaKnown RBP17.97■□□□□ 0.47
PDZD4-201ENST00000164640 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
PDZD4-201ENST00000164640 CFAP74Q9C0B2 1584 aa17.97■□□□□ 0.47
PDZD4-201ENST00000164640 TFIP11Q9UBB9 837 aaKnown RBP17.96■□□□□ 0.47
PDZD4-201ENST00000164640 CWC27Q6UX04 472 aaKnown RBP17.96■□□□□ 0.47
PDZD4-201ENST00000164640 CASTP20810 708 aaKnown RBP17.96■□□□□ 0.47
PDZD4-201ENST00000164640 KRT222Q8N1A0 295 aa17.96■□□□□ 0.47
PDZD4-201ENST00000164640 SPTLC3Q9NUV7 552 aa17.96■□□□□ 0.47
PDZD4-201ENST00000164640 BECN2A8MW95 431 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 CLIP2Q9UDT6 1046 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 IQGAP1P46940 1657 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 F13A1P00488 732 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 GJB2P29033 226 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
PDZD4-201ENST00000164640 STK31Q9BXU1 1019 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 NSD2O96028 1365 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 TIGD1Q96MW7 591 aa17.95■□□□□ 0.46
PDZD4-201ENST00000164640 GNAI2P04899 355 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 CHMLP26374 656 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 ANO6Q4KMQ2 910 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 CEP135Q66GS9 1140 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 MSH6P52701 1360 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 FOSBP53539 338 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
PDZD4-201ENST00000164640 MYOM1P52179 1685 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 IQGAP3Q86VI3 1631 aa17.94■□□□□ 0.46
PDZD4-201ENST00000164640 RNF17Q9BXT8 1623 aaKnown RBP17.93■□□□□ 0.46
PDZD4-201ENST00000164640 SMTNL1A8MU46 457 aa17.93■□□□□ 0.46
PDZD4-201ENST00000164640 AK2P54819 239 aa17.93■□□□□ 0.46
PDZD4-201ENST00000164640 CUL4AQ13619 759 aa17.93■□□□□ 0.46
PDZD4-201ENST00000164640 LARP1BQ659C4 914 aaKnown RBP17.93■□□□□ 0.46
PDZD4-201ENST00000164640 NECAB1Q8N987 351 aa17.93■□□□□ 0.46
PDZD4-201ENST00000164640 FAM200AQ8TCP9 573 aa17.93■□□□□ 0.46
PDZD4-201ENST00000164640 PTPN14Q15678 1187 aa17.93■□□□□ 0.46
PDZD4-201ENST00000164640 POLKQ9UBT6 870 aa17.93■□□□□ 0.46
PDZD4-201ENST00000164640 UNC13BO14795 1591 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 AP5Z1O43299 807 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 LIMCH1Q9UPQ0 1083 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 CEP152O94986 1710 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 CDK19Q9BWU1 502 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 ABCA8O94911 1581 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 SURF6O75683 361 aaKnown RBP17.92■□□□□ 0.46
PDZD4-201ENST00000164640 KRT85P78386 507 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 TYRO3Q06418 890 aa17.92■□□□□ 0.46
PDZD4-201ENST00000164640 ZRSR1Q15695 479 aaKnown RBP17.92■□□□□ 0.46
PDZD4-201ENST00000164640 JAKMIP1Q96N16 626 aaKnown RBP17.92■□□□□ 0.46
PDZD4-201ENST00000164640 STK3Q13188 491 aa17.91■□□□□ 0.46
PDZD4-201ENST00000164640 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
PDZD4-201ENST00000164640 SYTL4Q96C24 671 aaPredicted RBP17.91■□□□□ 0.46
PDZD4-201ENST00000164640 TMEM51Q9NW97 253 aa17.91■□□□□ 0.46
PDZD4-201ENST00000164640 POLR3GO15318 223 aaPredicted RBP17.91■□□□□ 0.46
PDZD4-201ENST00000164640 UNC5CLQ8IV45 518 aa17.91■□□□□ 0.46
PDZD4-201ENST00000164640 DACT1Q9NYF0 836 aa17.91■□□□□ 0.46
PDZD4-201ENST00000164640 ZNF165P49910 485 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 GABPB1Q06547 395 aaPredicted RBP17.9■□□□□ 0.46
PDZD4-201ENST00000164640 ANKRD7Q92527 254 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 GTF3C6Q969F1 213 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 ZBTB9Q96C00 473 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 DNAJC25Q9H1X3 360 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 CTNNA3Q9UI47 895 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 PAXBP1Q9Y5B6 917 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 ELF2Q15723 593 aa17.9■□□□□ 0.46
PDZD4-201ENST00000164640 ANAPC15P60006 121 aa17.89■□□□□ 0.45
PDZD4-201ENST00000164640 ZRANB1Q9UGI0 708 aa17.89■□□□□ 0.45
PDZD4-201ENST00000164640 TSPYL4Q9UJ04 414 aa17.89■□□□□ 0.45
PDZD4-201ENST00000164640 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
PDZD4-201ENST00000164640 HOMER1Q86YM7 354 aa17.89■□□□□ 0.45
PDZD4-201ENST00000164640 ZNF215Q9UL58 517 aaPredicted RBP17.89■□□□□ 0.45
PDZD4-201ENST00000164640 SPATA32Q96LK8 384 aa17.88■□□□□ 0.45
PDZD4-201ENST00000164640 TCEANC2Q96MN5 208 aa17.88■□□□□ 0.45
PDZD4-201ENST00000164640 PDRG1Q9NUG6 133 aa17.88■□□□□ 0.45
PDZD4-201ENST00000164640 NUTM2FA1L443 756 aa17.88■□□□□ 0.45
PDZD4-201ENST00000164640 ST7Q9NRC1 585 aa17.88■□□□□ 0.45
PDZD4-201ENST00000164640 TRIM34Q9BYJ4 488 aa17.88■□□□□ 0.45
PDZD4-201ENST00000164640 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
PDZD4-201ENST00000164640 BRPF1P55201 1214 aaPredicted RBP17.87■□□□□ 0.45
PDZD4-201ENST00000164640 PRPF40BQ6NWY9 871 aaKnown RBP17.87■□□□□ 0.45
PDZD4-201ENST00000164640 G2E3Q7L622 706 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 NME9Q86XW9 330 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 SBNO2Q9Y2G9 1366 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 COG3Q96JB2 828 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 ZFP91Q96JP5 570 aaPredicted RBP17.87■□□□□ 0.45
PDZD4-201ENST00000164640 NOL10Q9BSC4 688 aaKnown RBP17.87■□□□□ 0.45
PDZD4-201ENST00000164640 CBX8Q9HC52 389 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 CALCOCO1Q9P1Z2 691 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 RTL1A6NKG5 1358 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 LIG1P18858 919 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
PDZD4-201ENST00000164640 SHPRHQ149N8 1683 aa17.86■□□□□ 0.45
PDZD4-201ENST00000164640 TRPM2O94759 1503 aa17.86■□□□□ 0.45
PDZD4-201ENST00000164640 ZNF397Q8NF99 534 aaPredicted RBP17.86■□□□□ 0.45
PDZD4-201ENST00000164640 DDX41Q9UJV9 622 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms