RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MAP3K2Q9Y2U5 619 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 ADAMTS13Q76LX8 1427 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 TULP1O00294 542 aaPredicted RBP14.7□□□□□ -0.06
CHPF2-201ENST00000035307 EXOC5O00471 708 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 KCNQ4P56696 695 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 AMOTQ4VCS5 1084 aa14.7□□□□□ -0.06
CHPF2-201ENST00000035307 REC8O95072 547 aa14.69□□□□□ -0.06
CHPF2-201ENST00000035307 DDX11L8A8MPP1 907 aa14.69□□□□□ -0.06
CHPF2-201ENST00000035307 INTS3Q68E01 1043 aaKnown RBP14.69□□□□□ -0.06
CHPF2-201ENST00000035307 DRC7Q8IY82 874 aa14.69□□□□□ -0.06
CHPF2-201ENST00000035307 COPS6Q7L5N1 327 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 KIAA0232Q92628 1395 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 PTPRMP28827 1452 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 TBC1D2Q9BYX2 928 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 GNAI3P08754 354 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 C8orf34Q49A92 452 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 SIRT1Q96EB6 747 aa14.68□□□□□ -0.06
CHPF2-201ENST00000035307 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
CHPF2-201ENST00000035307 CCDC27Q2M243 656 aa14.67□□□□□ -0.06
CHPF2-201ENST00000035307 BRINP3Q76B58 766 aa14.67□□□□□ -0.06
CHPF2-201ENST00000035307 ZFYVE9O95405 1425 aa14.67□□□□□ -0.06
CHPF2-201ENST00000035307 TOM1O60784 492 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
CHPF2-201ENST00000035307 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 GPATCH3Q96I76 525 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 LARP6Q9BRS8 491 aaKnown RBP14.66□□□□□ -0.06
CHPF2-201ENST00000035307 RICTORQ6R327 1708 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 DNAAF4Q8WXU2 420 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
CHPF2-201ENST00000035307 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
CHPF2-201ENST00000035307 ARHGEF40Q8TER5 1519 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
CHPF2-201ENST00000035307 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 WWC3Q9ULE0 1092 aa14.66□□□□□ -0.06
CHPF2-201ENST00000035307 QRICH2Q9H0J4 1663 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 KDM4FA0A1W2PPD8 638 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 CCT4P50991 539 aaKnown RBP14.65□□□□□ -0.06
CHPF2-201ENST00000035307 AKAP4Q5JQC9 854 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 ARHGEF25Q86VW2 580 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 CHMP4AQ9BY43 222 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 PA2G4Q9UQ80 394 aaKnown RBP14.65□□□□□ -0.06
CHPF2-201ENST00000035307 PREX1Q8TCU6 1659 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 KDM4AO75164 1064 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 CAVIN1Q6NZI2 390 aaKnown RBP14.65□□□□□ -0.06
CHPF2-201ENST00000035307 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
CHPF2-201ENST00000035307 UPF3BQ9BZI7 483 aaKnown RBP14.65□□□□□ -0.06
CHPF2-201ENST00000035307 A1BGP04217 495 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 BCL11BQ9C0K0 894 aaPredicted RBP14.65□□□□□ -0.06
CHPF2-201ENST00000035307 TBC1D2BQ9UPU7 963 aa14.65□□□□□ -0.06
CHPF2-201ENST00000035307 CT47B1P0C2W7 299 aaPredicted RBP14.64□□□□□ -0.07
CHPF2-201ENST00000035307 CCDC8Q9H0W5 538 aaPredicted RBP14.64□□□□□ -0.07
CHPF2-201ENST00000035307 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
CHPF2-201ENST00000035307 STK11IPQ8N1F8 1099 aa14.64□□□□□ -0.07
CHPF2-201ENST00000035307 ZNF496Q96IT1 587 aaPredicted RBP14.64□□□□□ -0.07
CHPF2-201ENST00000035307 TOMM22Q9NS69 142 aa14.64□□□□□ -0.07
CHPF2-201ENST00000035307 CHL1O00533 1208 aa14.64□□□□□ -0.07
CHPF2-201ENST00000035307 KLHDC4Q8TBB5 520 aa14.64□□□□□ -0.07
CHPF2-201ENST00000035307 OTUD7AQ8TE49 926 aaPredicted RBP14.64□□□□□ -0.07
CHPF2-201ENST00000035307 DBF4Q9UBU7 674 aaPredicted RBP14.64□□□□□ -0.07
CHPF2-201ENST00000035307 ZNF521Q96K83 1311 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 IL2RBP14784 551 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 MAP3K5Q99683 1374 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 A0A087WZG4 1122 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 PRPF40AO75400 957 aaKnown RBP14.63□□□□□ -0.07
CHPF2-201ENST00000035307 FBXW7Q969H0 707 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 VWDEQ8N2E2 1590 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 FMNL2Q96PY5 1086 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 USP16Q9Y5T5 823 aa14.63□□□□□ -0.07
CHPF2-201ENST00000035307 ADGRB1O14514 1584 aa14.62□□□□□ -0.07
CHPF2-201ENST00000035307 CPS1P31327 1500 aa14.62□□□□□ -0.07
CHPF2-201ENST00000035307 PHF14O94880 888 aa14.62□□□□□ -0.07
CHPF2-201ENST00000035307 CCDC24Q8N4L8 307 aa14.62□□□□□ -0.07
CHPF2-201ENST00000035307 PPP1R42Q7Z4L9 355 aa14.62□□□□□ -0.07
CHPF2-201ENST00000035307 CLASRPQ8N2M8 674 aaKnown RBP14.62□□□□□ -0.07
CHPF2-201ENST00000035307 PROSER3Q2NL68 480 aa14.62□□□□□ -0.07
CHPF2-201ENST00000035307 ZMYM4Q5VZL5 1548 aa14.62□□□□□ -0.07
CHPF2-201ENST00000035307 FAM135BQ49AJ0 1406 aa14.61□□□□□ -0.07
CHPF2-201ENST00000035307 CHMP4CQ96CF2 233 aa14.61□□□□□ -0.07
CHPF2-201ENST00000035307 MYO5BQ9ULV0 1848 aa14.61□□□□□ -0.07
CHPF2-201ENST00000035307 IL16Q14005 1332 aa14.61□□□□□ -0.07
CHPF2-201ENST00000035307 GNL2Q13823 731 aaKnown RBP14.61□□□□□ -0.07
CHPF2-201ENST00000035307 GLIPR1L2Q4G1C9 344 aa14.61□□□□□ -0.07
CHPF2-201ENST00000035307 KIF6Q6ZMV9 814 aa14.61□□□□□ -0.07
CHPF2-201ENST00000035307 MCM4P33991 863 aa14.6□□□□□ -0.07
CHPF2-201ENST00000035307 AAMPQ13685 434 aa14.6□□□□□ -0.07
CHPF2-201ENST00000035307 AACSQ86V21 672 aa14.6□□□□□ -0.07
CHPF2-201ENST00000035307 LRRCC1Q9C099 1032 aa14.6□□□□□ -0.07
CHPF2-201ENST00000035307 PRIM1P49642 420 aaKnown RBP14.6□□□□□ -0.07
CHPF2-201ENST00000035307 RIMS1Q86UR5 1692 aaKnown RBP14.6□□□□□ -0.07
CHPF2-201ENST00000035307 USP19O94966 1318 aa14.6□□□□□ -0.07
CHPF2-201ENST00000035307 DDB1Q16531 1140 aa14.6□□□□□ -0.07
CHPF2-201ENST00000035307 AGLP35573 1532 aa14.6□□□□□ -0.07
CHPF2-201ENST00000035307 SIGLEC1Q9BZZ2 1709 aa14.59□□□□□ -0.07
CHPF2-201ENST00000035307 DTNBO60941 627 aa14.59□□□□□ -0.07
CHPF2-201ENST00000035307 ZNF790Q6PG37 636 aa14.59□□□□□ -0.07
CHPF2-201ENST00000035307 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.07
CHPF2-201ENST00000035307 BOLA2Q9H3K6 86 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms