RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Kdm2bQ6P1G2 1309 aa17.02■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Irgm2A0A140LIF8 407 aa17.02■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 LifrP42703 1092 aa17.02■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Tspyl3Q3UYP3 334 aa17.02■□□□□ 0.32
Pcdha1-201ENSMUST00000070797 Mnat1P51949 309 aa17.02■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Gm1979E9QAN3 267 aa17.02■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Ccdc114Q3UX62 658 aa17.02■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Plekhm2Q80TQ5 1018 aa17.02■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Zbtb22Q9Z0G7 638 aa17.02■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Mybbp1aQ7TPV4 1344 aaKnown RBP17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 BicraF8VPZ9 1578 aa17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Mtmr3Q8K296 1196 aa17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Tubb5P99024 444 aaKnown RBP17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 CenppQ9CZ92 286 aa17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Gng11P61953 73 aa17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 UvssaQ9D479 717 aa17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 GmnnO88513 206 aa17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Erc1Q99MI1 1120 aa17.01■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Pms1Q8K119 917 aa17■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 HypkQ9CR41 129 aa17■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Paip2Q9D6V8 124 aa17■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Cyp26c1B2RXA7 518 aa17■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Cabp2Q9JLK4 216 aa17■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 PsapQ61207 557 aaKnown RBP17■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Ccdc66Q6NS45 935 aa17■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Ankrd44B2RXR6 993 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Cfap53Q9D439 514 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Golga5Q9QYE6 729 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Gm21190A0A0G2JGJ6 266 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Brf1Q8CFK2 676 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Smco2Q9DA21 347 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Limch1Q3UH68 1057 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Snx13Q6PHS6 957 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Ccdc12Q8R344 166 aaKnown RBP16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Brms1Q99N20 246 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Map2k1P31938 393 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Bloc1s2Q9CWG9 143 aa16.99■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Brd1E9PZ26 1189 aaKnown RBP16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Lrrfip1Q3UZ39 729 aaKnown RBP16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Pde1cQ64338 706 aa16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Ccdc186Q8C9S4 917 aa16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 PalmQ9Z0P4 383 aa16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 ImmtQ8CAQ8 757 aaKnown RBP16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Smarca5Q91ZW3 1051 aaKnown RBP16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Atxn3Q9CVD2 355 aa16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Mkrn1Q9QXP6 481 aa16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Syt10Q9R0N4 523 aa16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Urb2E9Q7L1 1524 aaKnown RBP16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 PtprkP35822 1457 aa16.98■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Zfp91Q62511 572 aa16.97■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Ccdc150Q8CDI7 1110 aa16.97■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 RalgapbQ8BQZ4 1484 aa16.97■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Naa15Q80UM3 865 aaKnown RBP16.97■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Srgap1Q91Z69 1062 aa16.97■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Trim11Q99PQ2 467 aa16.97■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Gas2l3Q3UWW6 683 aa16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Ppp4r3bQ922R5 820 aa16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Pik3r4Q8VD65 1358 aa16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Uspl1Q3ULM6 1089 aa16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Kdm4cQ8VCD7 1054 aa16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Bcl11bQ99PV8 884 aa16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 U2af2P26369 475 aaKnown RBP16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Prkar2bP31324 416 aa16.96■□□□□ 0.31
Pcdha1-201ENSMUST00000070797 Q3UPC7 1272 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Agtpbp1Q641K1 1218 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Dpf1Q9QX66 387 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Fam13aQ8BGI4 693 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Fam135bQ9DAI6 1403 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 PaskQ8CEE6 1383 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Plekhd1B2RPU2 505 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Tyro3P55144 880 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Sh3bp1P55194 680 aa16.95■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Smc1aQ9CU62 1233 aaKnown RBP16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Map7d1A2AJI0 846 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Fsd2Q8BZ52 692 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Lrrc45Q8CIM1 670 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Hip1rQ9JKY5 1068 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Ncapg2Q6DFV1 1138 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Oas2E9Q9A9 742 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Tacc1Q6Y685 774 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Arhgap5P97393 1501 aa16.94■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Mex3cQ05A36 652 aaKnown RBP16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Skor1Q8BX46 964 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Gm21680A0A0G2JGR8 267 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Sparcl1P70663 650 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Ddx46Q569Z5 1032 aaKnown RBP16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Pip4k2bQ80XI4 416 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Aldh8a1Q8BH00 487 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Ppp1r42Q8R1Z4 357 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Rbm33Q9CXK9 1231 aaKnown RBP16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Nol8Q3UHX0 1147 aaKnown RBP16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Ppfibp1Q8C8U0 969 aaKnown RBP16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Ncapd2Q8K2Z4 1392 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Krt84Q99M73 603 aa16.93■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Zscan20B2KFW1 1030 aa16.92■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Ranbp1P34022 203 aaKnown RBP16.92■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Mcm5P49718 733 aa16.92■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Zkscan4Q5SZT6 480 aa16.92■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Ppm1fQ8CGA0 452 aa16.92■□□□□ 0.3
Pcdha1-201ENSMUST00000070797 Bcar3Q9QZK2 820 aa16.92■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms