Protein–RNA interactions for Protein: P01851

T-cell receptor beta-2 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01851 Gm25239-201ENSMUST00000174915 86 ntBASIC35.1■■■■□ 3.21
P01851 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
P01851 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
P01851 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
P01851 Gm15042-201ENSMUST00000120212 883 ntBASIC30.88■■■□□ 2.53
P01851 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
P01851 Gm24109-201ENSMUST00000175489 103 ntBASIC30.33■■■□□ 2.45
P01851 Gm15045-201ENSMUST00000117359 883 ntBASIC30.21■■■□□ 2.43
P01851 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
P01851 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
P01851 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
P01851 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
P01851 Gm23366-201ENSMUST00000175022 89 ntBASIC29.37■■■□□ 2.29
P01851 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
P01851 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
P01851 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.91■■■□□ 2.22
P01851 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
P01851 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
P01851 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
P01851 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
P01851 Psd-208ENSMUST00000224556 2034 ntBASIC28.57■■■□□ 2.16
P01851 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
P01851 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
P01851 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
P01851 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
P01851 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
P01851 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.3■■■□□ 2.12
P01851 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
P01851 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.27■■■□□ 2.12
P01851 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
P01851 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.06■■■□□ 2.08
P01851 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.89■■■□□ 2.06
P01851 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.83■■■□□ 2.05
P01851 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
P01851 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
P01851 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
P01851 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
P01851 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
P01851 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
P01851 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.64■■■□□ 2.02
P01851 Gm25238-201ENSMUST00000174914 89 ntBASIC27.63■■■□□ 2.01
P01851 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
P01851 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
P01851 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.35■■□□□ 1.97
P01851 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
P01851 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
P01851 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
P01851 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
P01851 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
P01851 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
P01851 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.12■■□□□ 1.93
P01851 Gm27325-201ENSMUST00000175467 74 ntBASIC27.09■■□□□ 1.93
P01851 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.04■■□□□ 1.92
P01851 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
P01851 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
P01851 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.87■■□□□ 1.89
P01851 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
P01851 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
P01851 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.82■■□□□ 1.88
P01851 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.77■■□□□ 1.88
P01851 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
P01851 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
P01851 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
P01851 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.69■■□□□ 1.86
P01851 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
P01851 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
P01851 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
P01851 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
P01851 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
P01851 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
P01851 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
P01851 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
P01851 Rab21-202ENSMUST00000218831 843 ntBASIC26.5■■□□□ 1.83
P01851 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
P01851 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
P01851 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
P01851 Gm25262-201ENSMUST00000174934 133 ntBASIC26.41■■□□□ 1.82
P01851 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.38■■□□□ 1.81
P01851 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.37■■□□□ 1.81
P01851 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.34■■□□□ 1.81
P01851 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
P01851 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
P01851 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.25■■□□□ 1.79
P01851 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
P01851 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
P01851 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
P01851 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
P01851 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
P01851 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
P01851 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
P01851 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.08■■□□□ 1.77
P01851 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.06■■□□□ 1.76
P01851 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
P01851 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.99■■□□□ 1.75
P01851 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
P01851 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
P01851 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
P01851 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
P01851 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
P01851 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms