Protein–RNA interactions for Protein: P00342

Ldhc, L-lactate dehydrogenase C chain, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdhcP00342 Gm25239-201ENSMUST00000174915 86 ntBASIC39.69■■■■□ 3.94
LdhcP00342 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
LdhcP00342 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
LdhcP00342 Gm15042-201ENSMUST00000120212 883 ntBASIC34.81■■■■□ 3.16
LdhcP00342 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
LdhcP00342 Gm24109-201ENSMUST00000175489 103 ntBASIC34.31■■■■□ 3.08
LdhcP00342 Gm15045-201ENSMUST00000117359 883 ntBASIC34.01■■■■□ 3.03
LdhcP00342 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
LdhcP00342 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
LdhcP00342 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
LdhcP00342 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
LdhcP00342 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.39■■■□□ 2.94
LdhcP00342 Gm23366-201ENSMUST00000175022 89 ntBASIC33.22■■■□□ 2.91
LdhcP00342 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
LdhcP00342 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
LdhcP00342 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
LdhcP00342 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.37■■■□□ 2.77
LdhcP00342 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
LdhcP00342 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
LdhcP00342 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
LdhcP00342 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.95■■■□□ 2.71
LdhcP00342 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
LdhcP00342 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LdhcP00342 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
LdhcP00342 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
LdhcP00342 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
LdhcP00342 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.76■■■□□ 2.67
LdhcP00342 Psd-208ENSMUST00000224556 2034 ntBASIC31.71■■■□□ 2.67
LdhcP00342 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.68■■■□□ 2.66
LdhcP00342 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.64■■■□□ 2.66
LdhcP00342 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
LdhcP00342 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LdhcP00342 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
LdhcP00342 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
LdhcP00342 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.34■■■□□ 2.61
LdhcP00342 Gm25238-201ENSMUST00000174914 89 ntBASIC31.27■■■□□ 2.6
LdhcP00342 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.15■■■□□ 2.58
LdhcP00342 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LdhcP00342 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
LdhcP00342 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LdhcP00342 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
LdhcP00342 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LdhcP00342 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
LdhcP00342 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.64■■■□□ 2.5
LdhcP00342 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.62■■■□□ 2.49
LdhcP00342 Gm27325-201ENSMUST00000175467 74 ntBASIC30.53■■■□□ 2.48
LdhcP00342 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
LdhcP00342 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LdhcP00342 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
LdhcP00342 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.44■■■□□ 2.46
LdhcP00342 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
LdhcP00342 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
LdhcP00342 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.29■■■□□ 2.44
LdhcP00342 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LdhcP00342 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.25■■■□□ 2.43
LdhcP00342 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.16■■■□□ 2.42
LdhcP00342 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
LdhcP00342 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LdhcP00342 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
LdhcP00342 Gm25262-201ENSMUST00000174934 133 ntBASIC29.98■■■□□ 2.39
LdhcP00342 Rab21-202ENSMUST00000218831 843 ntBASIC29.94■■■□□ 2.38
LdhcP00342 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.91■■■□□ 2.38
LdhcP00342 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LdhcP00342 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
LdhcP00342 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
LdhcP00342 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
LdhcP00342 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.83■■■□□ 2.37
LdhcP00342 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
LdhcP00342 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LdhcP00342 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
LdhcP00342 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.78■■■□□ 2.36
LdhcP00342 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.69■■■□□ 2.34
LdhcP00342 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
LdhcP00342 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
LdhcP00342 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
LdhcP00342 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
LdhcP00342 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
LdhcP00342 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
LdhcP00342 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
LdhcP00342 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.52■■■□□ 2.32
LdhcP00342 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
LdhcP00342 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.45■■■□□ 2.31
LdhcP00342 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
LdhcP00342 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.41■■■□□ 2.3
LdhcP00342 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.35■■■□□ 2.29
LdhcP00342 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.34■■■□□ 2.29
LdhcP00342 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LdhcP00342 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
LdhcP00342 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.29■■■□□ 2.28
LdhcP00342 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LdhcP00342 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LdhcP00342 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
LdhcP00342 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
LdhcP00342 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
LdhcP00342 Gm26115-201ENSMUST00000175605 87 ntBASIC29.18■■■□□ 2.26
LdhcP00342 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
LdhcP00342 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
LdhcP00342 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.13■■■□□ 2.25
LdhcP00342 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.1■■■□□ 2.25
LdhcP00342 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms