Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Gm25239-201ENSMUST00000174915 86 ntBASIC33.47■■■□□ 2.95
Sh2b3O09039 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31■■■□□ 2.55
Sh2b3O09039 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Sh2b3O09039 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Sh2b3O09039 Gm15042-201ENSMUST00000120212 883 ntBASIC29.15■■■□□ 2.26
Sh2b3O09039 Gm24109-201ENSMUST00000175489 103 ntBASIC29.05■■■□□ 2.24
Sh2b3O09039 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Sh2b3O09039 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Sh2b3O09039 Gm15045-201ENSMUST00000117359 883 ntBASIC28.42■■■□□ 2.14
Sh2b3O09039 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sh2b3O09039 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sh2b3O09039 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Sh2b3O09039 Gm23366-201ENSMUST00000175022 89 ntBASIC27.98■■■□□ 2.07
Sh2b3O09039 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sh2b3O09039 Psd-208ENSMUST00000224556 2034 ntBASIC27.73■■■□□ 2.03
Sh2b3O09039 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sh2b3O09039 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sh2b3O09039 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Sh2b3O09039 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.14■■□□□ 1.94
Sh2b3O09039 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.08■■□□□ 1.93
Sh2b3O09039 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Sh2b3O09039 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Sh2b3O09039 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.91■■□□□ 1.9
Sh2b3O09039 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Sh2b3O09039 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sh2b3O09039 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sh2b3O09039 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sh2b3O09039 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sh2b3O09039 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sh2b3O09039 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sh2b3O09039 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sh2b3O09039 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sh2b3O09039 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sh2b3O09039 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sh2b3O09039 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sh2b3O09039 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.52■■□□□ 1.84
Sh2b3O09039 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sh2b3O09039 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sh2b3O09039 Gm25238-201ENSMUST00000174914 89 ntBASIC26.44■■□□□ 1.82
Sh2b3O09039 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sh2b3O09039 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sh2b3O09039 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.33■■□□□ 1.81
Sh2b3O09039 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh2b3O09039 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sh2b3O09039 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.07■■□□□ 1.76
Sh2b3O09039 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
Sh2b3O09039 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sh2b3O09039 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Sh2b3O09039 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh2b3O09039 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sh2b3O09039 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sh2b3O09039 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh2b3O09039 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.75■■□□□ 1.71
Sh2b3O09039 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Sh2b3O09039 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.65■■□□□ 1.7
Sh2b3O09039 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.59■■□□□ 1.69
Sh2b3O09039 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sh2b3O09039 Gm27325-201ENSMUST00000175467 74 ntBASIC25.51■■□□□ 1.67
Sh2b3O09039 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.49■■□□□ 1.67
Sh2b3O09039 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.49■■□□□ 1.67
Sh2b3O09039 Gm25262-201ENSMUST00000174934 133 ntBASIC25.46■■□□□ 1.67
Sh2b3O09039 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.4■■□□□ 1.66
Sh2b3O09039 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sh2b3O09039 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sh2b3O09039 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh2b3O09039 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Sh2b3O09039 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh2b3O09039 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sh2b3O09039 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sh2b3O09039 Rab21-202ENSMUST00000218831 843 ntBASIC25.15■■□□□ 1.62
Sh2b3O09039 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sh2b3O09039 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sh2b3O09039 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.11■■□□□ 1.61
Sh2b3O09039 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.08■■□□□ 1.61
Sh2b3O09039 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.04■■□□□ 1.6
Sh2b3O09039 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh2b3O09039 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sh2b3O09039 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.98■■□□□ 1.59
Sh2b3O09039 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Sh2b3O09039 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.87■■□□□ 1.57
Sh2b3O09039 Gm26115-201ENSMUST00000175605 87 ntBASIC24.87■■□□□ 1.57
Sh2b3O09039 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Sh2b3O09039 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sh2b3O09039 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Sh2b3O09039 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sh2b3O09039 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.81■■□□□ 1.56
Sh2b3O09039 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Sh2b3O09039 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Sh2b3O09039 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.78■■□□□ 1.56
Sh2b3O09039 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sh2b3O09039 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sh2b3O09039 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Sh2b3O09039 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
Sh2b3O09039 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Sh2b3O09039 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.73■■□□□ 1.55
Sh2b3O09039 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Sh2b3O09039 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.71■■□□□ 1.55
Sh2b3O09039 Gm8109-201ENSMUST00000194076 746 ntBASIC24.68■■□□□ 1.54
Sh2b3O09039 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Sh2b3O09039 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms