Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.45□□□□□ -3.28
CCDC42Q96M95 RNU6-836P-201ENST00000362920 107 ntBASIC-5.46□□□□□ -3.28
CCDC42Q96M95 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.46□□□□□ -3.28
CCDC42Q96M95 SNORD115.2-201ENST00000391126 59 ntBASIC-5.46□□□□□ -3.28
CCDC42Q96M95 RNU6-854P-201ENST00000364036 107 ntBASIC-5.47□□□□□ -3.29
CCDC42Q96M95 Y_RNA.137-201ENST00000363455 112 ntBASIC-5.51□□□□□ -3.29
CCDC42Q96M95 Y_RNA.335-201ENST00000365299 96 ntBASIC-5.52□□□□□ -3.29
CCDC42Q96M95 AC110620.1-201ENST00000416042 228 ntBASIC-5.52□□□□□ -3.29
CCDC42Q96M95 SNORD115-45-201ENST00000391078 81 ntBASIC-5.54□□□□□ -3.3
CCDC42Q96M95 RNU6-1161P-201ENST00000516176 102 ntBASIC-5.54□□□□□ -3.3
CCDC42Q96M95 RNA5SP89-201ENST00000410300 108 ntBASIC-5.58□□□□□ -3.3
CCDC42Q96M95 MIR548H4-201ENST00000408689 111 ntBASIC-5.6□□□□□ -3.31
CCDC42Q96M95 RNY4P30-201ENST00000410216 95 ntBASIC-5.61□□□□□ -3.31
CCDC42Q96M95 RNU6-919P-201ENST00000516731 104 ntBASIC-5.63□□□□□ -3.31
CCDC42Q96M95 RNU6-776P-201ENST00000364403 104 ntBASIC-5.65□□□□□ -3.31
CCDC42Q96M95 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.65□□□□□ -3.31
CCDC42Q96M95 RNU6-820P-201ENST00000384273 107 ntBASIC-5.65□□□□□ -3.31
CCDC42Q96M95 MIR124-1-201ENST00000385275 85 ntBASIC-5.66□□□□□ -3.32
CCDC42Q96M95 MIR548AL-201ENST00000578416 97 ntBASIC-5.66□□□□□ -3.32
CCDC42Q96M95 RNU6-215P-201ENST00000365169 102 ntBASIC-5.67□□□□□ -3.32
CCDC42Q96M95 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.68□□□□□ -3.32
CCDC42Q96M95 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.71□□□□□ -3.32
CCDC42Q96M95 RNU6-294P-201ENST00000364999 102 ntBASIC-5.72□□□□□ -3.33
CCDC42Q96M95 AC099654.10-201ENST00000640395 161 ntBASIC-5.73□□□□□ -3.33
CCDC42Q96M95 SNORD20-201ENST00000384550 80 ntBASIC-5.75□□□□□ -3.33
CCDC42Q96M95 RNU6-406P-201ENST00000516470 107 ntBASIC-5.75□□□□□ -3.33
CCDC42Q96M95 RNU6-446P-201ENST00000362827 106 ntBASIC-5.79□□□□□ -3.34
CCDC42Q96M95 RNU4-33P-201ENST00000364316 85 ntBASIC-5.79□□□□□ -3.34
CCDC42Q96M95 Y_RNA.520-201ENST00000384556 102 ntBASIC-5.79□□□□□ -3.34
CCDC42Q96M95 MIR548AH-201ENST00000637109 76 ntBASIC-5.79□□□□□ -3.34
CCDC42Q96M95 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.8□□□□□ -3.34
CCDC42Q96M95 AC114801.3-201ENST00000510231 177 ntBASIC-5.8□□□□□ -3.34
CCDC42Q96M95 MIR4719-201ENST00000585233 84 ntBASIC-5.8□□□□□ -3.34
CCDC42Q96M95 MIR548M-201ENST00000408260 86 ntBASIC-5.81□□□□□ -3.34
CCDC42Q96M95 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.82□□□□□ -3.34
CCDC42Q96M95 MIR3202-2-201ENST00000635980 79 ntBASIC-5.83□□□□□ -3.34
CCDC42Q96M95 Y_RNA.694-201ENST00000516677 117 ntBASIC-5.84□□□□□ -3.34
CCDC42Q96M95 SNORD113-1-201ENST00000365321 69 ntBASIC-5.85□□□□□ -3.35
CCDC42Q96M95 RNU6-788P-201ENST00000390967 104 ntBASIC-5.85□□□□□ -3.35
CCDC42Q96M95 MIR3910-1-201ENST00000580936 111 ntBASIC-5.87□□□□□ -3.35
CCDC42Q96M95 RNU6-857P-201ENST00000515893 110 ntBASIC-5.88□□□□□ -3.35
CCDC42Q96M95 RNU6-153P-201ENST00000364422 104 ntBASIC-5.9□□□□□ -3.35
CCDC42Q96M95 RNU6-44P-201ENST00000384045 107 ntBASIC-5.9□□□□□ -3.35
CCDC42Q96M95 RNU6-422P-201ENST00000384632 107 ntBASIC-5.9□□□□□ -3.35
CCDC42Q96M95 RNU6-808P-201ENST00000391233 108 ntBASIC-5.9□□□□□ -3.35
CCDC42Q96M95 RNU6-471P-201ENST00000383944 106 ntBASIC-5.91□□□□□ -3.36
CCDC42Q96M95 RNU6-665P-201ENST00000384639 107 ntBASIC-5.91□□□□□ -3.36
CCDC42Q96M95 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.94□□□□□ -3.36
CCDC42Q96M95 RNU6-279P-201ENST00000391297 101 ntBASIC-5.94□□□□□ -3.36
CCDC42Q96M95 Y_RNA.81-201ENST00000362997 102 ntBASIC-5.97□□□□□ -3.37
CCDC42Q96M95 MIR545-201ENST00000385085 106 ntBASIC-5.97□□□□□ -3.37
CCDC42Q96M95 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.98□□□□□ -3.37
CCDC42Q96M95 SNORD113-4-201ENST00000364802 75 ntBASIC-5.99□□□□□ -3.37
CCDC42Q96M95 Y_RNA.369-201ENST00000365568 117 ntBASIC-6.01□□□□□ -3.37
CCDC42Q96M95 Y_RNA.565-201ENST00000384719 101 ntBASIC-6.03□□□□□ -3.37
CCDC42Q96M95 MIR1255A-201ENST00000408338 113 ntBASIC-6.04□□□□□ -3.38
CCDC42Q96M95 MIR5582-201ENST00000579697 68 ntBASIC-6.08□□□□□ -3.38
CCDC42Q96M95 AL606753.1-201ENST00000427435 87 ntBASIC-6.12□□□□□ -3.39
CCDC42Q96M95 MIR3668-201ENST00000582138 75 ntBASIC-6.12□□□□□ -3.39
CCDC42Q96M95 RNU6-838P-201ENST00000363399 108 ntBASIC-6.13□□□□□ -3.39
CCDC42Q96M95 RNU6-1043P-201ENST00000410355 99 ntBASIC-6.17□□□□□ -3.4
CCDC42Q96M95 RNU6-829P-201ENST00000363700 112 ntBASIC-6.2□□□□□ -3.4
CCDC42Q96M95 RNU6-573P-201ENST00000383938 106 ntBASIC-6.21□□□□□ -3.4
CCDC42Q96M95 RNU6-59P-201ENST00000384787 107 ntBASIC-6.21□□□□□ -3.4
CCDC42Q96M95 SNORA26.2-201ENST00000390922 122 ntBASIC-6.21□□□□□ -3.4
CCDC42Q96M95 Y_RNA.379-201ENST00000365653 102 ntBASIC-6.22□□□□□ -3.41
CCDC42Q96M95 MIR4662A-201ENST00000637499 67 ntBASIC-6.25□□□□□ -3.41
CCDC42Q96M95 MT-TR-201ENST00000387439 65 ntBASIC-6.28□□□□□ -3.41
CCDC42Q96M95 MIR633-201ENST00000384821 98 ntBASIC-6.29□□□□□ -3.42
CCDC42Q96M95 snosnR66.1-201ENST00000391095 99 ntBASIC-6.31□□□□□ -3.42
CCDC42Q96M95 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-6.34□□□□□ -3.42
CCDC42Q96M95 SNORD73B-201ENST00000364394 72 ntBASIC-6.35□□□□□ -3.43
CCDC42Q96M95 Y_RNA.406-201ENST00000383984 100 ntBASIC-6.36□□□□□ -3.43
CCDC42Q96M95 SNORD78.1-201ENST00000390866 65 ntBASIC-6.38□□□□□ -3.43
CCDC42Q96M95 RNA5SP225-201ENST00000410874 135 ntBASIC-6.38□□□□□ -3.43
CCDC42Q96M95 RNU6-1128P-201ENST00000362825 109 ntBASIC-6.39□□□□□ -3.43
CCDC42Q96M95 RNU6-986P-201ENST00000363133 102 ntBASIC-6.4□□□□□ -3.43
CCDC42Q96M95 RNY4P29-201ENST00000410801 97 ntBASIC-6.4□□□□□ -3.43
CCDC42Q96M95 MIR3671-201ENST00000580455 88 ntBASIC-6.41□□□□□ -3.44
CCDC42Q96M95 RNY4P13-201ENST00000384284 96 ntBASIC-6.45□□□□□ -3.44
CCDC42Q96M95 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.47□□□□□ -3.45
CCDC42Q96M95 AC079150.2-201ENST00000443733 78 ntBASIC-6.52□□□□□ -3.45
CCDC42Q96M95 RNU6-753P-201ENST00000363926 107 ntBASIC-6.57□□□□□ -3.46
CCDC42Q96M95 RNU4-85P-201ENST00000364675 123 ntBASIC-6.57□□□□□ -3.46
CCDC42Q96M95 RNA5SP449-201ENST00000516871 130 ntBASIC-6.57□□□□□ -3.46
CCDC42Q96M95 RNU6-930P-201ENST00000390938 100 ntBASIC-6.64□□□□□ -3.47
CCDC42Q96M95 MIR548F3-201ENST00000408509 87 ntBASIC-6.68□□□□□ -3.48
CCDC42Q96M95 RNA5SP170-201ENST00000517150 101 ntBASIC-6.68□□□□□ -3.48
CCDC42Q96M95 RNU6-936P-201ENST00000384005 107 ntBASIC-6.77□□□□□ -3.49
CCDC42Q96M95 AC125388.1-201ENST00000459631 156 ntBASIC-6.78□□□□□ -3.49
CCDC42Q96M95 RNU6-1298P-201ENST00000362456 101 ntBASIC-6.79□□□□□ -3.5
CCDC42Q96M95 Y_RNA.165-201ENST00000363721 102 ntBASIC-6.83□□□□□ -3.5
CCDC42Q96M95 RNU6-1024P-201ENST00000384199 107 ntBASIC-6.83□□□□□ -3.5
CCDC42Q96M95 RNU6-627P-201ENST00000364032 102 ntBASIC-6.84□□□□□ -3.5
CCDC42Q96M95 AL603908.1-201ENST00000406098 201 ntBASIC-6.85□□□□□ -3.51
CCDC42Q96M95 RNU6-499P-201ENST00000365615 107 ntBASIC-6.86□□□□□ -3.51
CCDC42Q96M95 Y_RNA.685-201ENST00000516532 108 ntBASIC-6.87□□□□□ -3.51
CCDC42Q96M95 MIR1302-4-201ENST00000408701 150 ntBASIC-6.9□□□□□ -3.51
CCDC42Q96M95 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-6.94□□□□□ -3.52
CCDC42Q96M95 MIR363-201ENST00000384840 75 ntBASIC-6.99□□□□□ -3.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms