Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.02□□□□□ -2.89
ZNF404Q494X3 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.02□□□□□ -2.89
ZNF404Q494X3 RNU6-279P-201ENST00000391297 101 ntBASIC-3.02□□□□□ -2.89
ZNF404Q494X3 MIR4317-201ENST00000637586 65 ntBASIC-3.05□□□□□ -2.9
ZNF404Q494X3 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.06□□□□□ -2.9
ZNF404Q494X3 AC139453.2-201ENST00000487255 133 ntBASIC-3.06□□□□□ -2.9
ZNF404Q494X3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.06□□□□□ -2.9
ZNF404Q494X3 MIR1255A-201ENST00000408338 113 ntBASIC-3.07□□□□□ -2.9
ZNF404Q494X3 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.08□□□□□ -2.9
ZNF404Q494X3 AL603908.1-201ENST00000406098 201 ntBASIC-3.09□□□□□ -2.9
ZNF404Q494X3 AL359920.1-201ENST00000618332 176 ntBASIC-3.09□□□□□ -2.9
ZNF404Q494X3 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.12□□□□□ -2.91
ZNF404Q494X3 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.12□□□□□ -2.91
ZNF404Q494X3 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.14□□□□□ -2.91
ZNF404Q494X3 RNA5SP224-201ENST00000365069 126 ntBASIC-3.14□□□□□ -2.91
ZNF404Q494X3 RNU6-573P-201ENST00000383938 106 ntBASIC-3.14□□□□□ -2.91
ZNF404Q494X3 RNU6-471P-201ENST00000383944 106 ntBASIC-3.14□□□□□ -2.91
ZNF404Q494X3 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.14□□□□□ -2.91
ZNF404Q494X3 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.14□□□□□ -2.91
ZNF404Q494X3 MIR656-201ENST00000385224 78 ntBASIC-3.14□□□□□ -2.91
ZNF404Q494X3 RNU6-446P-201ENST00000362827 106 ntBASIC-3.15□□□□□ -2.91
ZNF404Q494X3 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.15□□□□□ -2.91
ZNF404Q494X3 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.15□□□□□ -2.91
ZNF404Q494X3 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.15□□□□□ -2.91
ZNF404Q494X3 SNORD73B-201ENST00000364394 72 ntBASIC-3.16□□□□□ -2.92
ZNF404Q494X3 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.16□□□□□ -2.92
ZNF404Q494X3 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.16□□□□□ -2.92
ZNF404Q494X3 SNORD114-13-201ENST00000364377 74 ntBASIC-3.17□□□□□ -2.92
ZNF404Q494X3 MIR509-1-201ENST00000385265 94 ntBASIC-3.18□□□□□ -2.92
ZNF404Q494X3 MIR509-2-201ENST00000390724 91 ntBASIC-3.18□□□□□ -2.92
ZNF404Q494X3 MIR548H4-201ENST00000408689 111 ntBASIC-3.18□□□□□ -2.92
ZNF404Q494X3 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.18□□□□□ -2.92
ZNF404Q494X3 AC114801.3-201ENST00000510231 177 ntBASIC-3.2□□□□□ -2.92
ZNF404Q494X3 MIR548AL-201ENST00000578416 97 ntBASIC-3.2□□□□□ -2.92
ZNF404Q494X3 RNU6-737P-201ENST00000365370 107 ntBASIC-3.21□□□□□ -2.92
ZNF404Q494X3 SNORD45C-201ENST00000383893 79 ntBASIC-3.21□□□□□ -2.92
ZNF404Q494X3 RNY4P29-201ENST00000410801 97 ntBASIC-3.21□□□□□ -2.92
ZNF404Q494X3 RNU6-836P-201ENST00000362920 107 ntBASIC-3.22□□□□□ -2.92
ZNF404Q494X3 SNORA26.2-201ENST00000390922 122 ntBASIC-3.22□□□□□ -2.92
ZNF404Q494X3 RNU4-33P-201ENST00000364316 85 ntBASIC-3.23□□□□□ -2.93
ZNF404Q494X3 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.23□□□□□ -2.93
ZNF404Q494X3 MIR4662A-201ENST00000637499 67 ntBASIC-3.23□□□□□ -2.93
ZNF404Q494X3 RNU6-776P-201ENST00000364403 104 ntBASIC-3.24□□□□□ -2.93
ZNF404Q494X3 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.24□□□□□ -2.93
ZNF404Q494X3 SNORD78.1-201ENST00000390866 65 ntBASIC-3.24□□□□□ -2.93
ZNF404Q494X3 SNORD115.2-201ENST00000391126 59 ntBASIC-3.24□□□□□ -2.93
ZNF404Q494X3 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.25□□□□□ -2.93
ZNF404Q494X3 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.25□□□□□ -2.93
ZNF404Q494X3 RNA5SP225-201ENST00000410874 135 ntBASIC-3.26□□□□□ -2.93
ZNF404Q494X3 SNORD113-4-201ENST00000364802 75 ntBASIC-3.28□□□□□ -2.93
ZNF404Q494X3 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.28□□□□□ -2.93
ZNF404Q494X3 RNU6-987P-201ENST00000384759 104 ntBASIC-3.28□□□□□ -2.93
ZNF404Q494X3 RNA5SP106-201ENST00000517274 100 ntBASIC-3.28□□□□□ -2.93
ZNF404Q494X3 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.29□□□□□ -2.94
ZNF404Q494X3 RNA5SP170-201ENST00000517150 101 ntBASIC-3.29□□□□□ -2.94
ZNF404Q494X3 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.3□□□□□ -2.94
ZNF404Q494X3 RNU6-854P-201ENST00000364036 107 ntBASIC-3.3□□□□□ -2.94
ZNF404Q494X3 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.32□□□□□ -2.94
ZNF404Q494X3 RNY4P10-201ENST00000365571 96 ntBASIC-3.34□□□□□ -2.94
ZNF404Q494X3 SNORD115-45-201ENST00000391078 81 ntBASIC-3.34□□□□□ -2.94
ZNF404Q494X3 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.34□□□□□ -2.94
ZNF404Q494X3 U2.22-201ENST00000636441 106 ntBASIC-3.35□□□□□ -2.95
ZNF404Q494X3 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.36□□□□□ -2.95
ZNF404Q494X3 RNU6-808P-201ENST00000391233 108 ntBASIC-3.37□□□□□ -2.95
ZNF404Q494X3 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.37□□□□□ -2.95
ZNF404Q494X3 RNU6-829P-201ENST00000363700 112 ntBASIC-3.38□□□□□ -2.95
ZNF404Q494X3 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.41□□□□□ -2.96
ZNF404Q494X3 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.42□□□□□ -2.96
ZNF404Q494X3 MIR633-201ENST00000384821 98 ntBASIC-3.42□□□□□ -2.96
ZNF404Q494X3 MIR124-1-201ENST00000385275 85 ntBASIC-3.43□□□□□ -2.96
ZNF404Q494X3 RNU6-838P-201ENST00000363399 108 ntBASIC-3.44□□□□□ -2.96
ZNF404Q494X3 MIR1302-4-201ENST00000408701 150 ntBASIC-3.45□□□□□ -2.96
ZNF404Q494X3 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.49□□□□□ -2.97
ZNF404Q494X3 MIR548AH-201ENST00000637109 76 ntBASIC-3.49□□□□□ -2.97
ZNF404Q494X3 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.51□□□□□ -2.97
ZNF404Q494X3 RNU6-788P-201ENST00000390967 104 ntBASIC-3.51□□□□□ -2.97
ZNF404Q494X3 AC079150.2-201ENST00000443733 78 ntBASIC-3.54□□□□□ -2.98
ZNF404Q494X3 RNU6-59P-201ENST00000384787 107 ntBASIC-3.55□□□□□ -2.98
ZNF404Q494X3 MIR545-201ENST00000385085 106 ntBASIC-3.55□□□□□ -2.98
ZNF404Q494X3 RNU6-665P-201ENST00000384639 107 ntBASIC-3.58□□□□□ -2.98
ZNF404Q494X3 RNU6-422P-201ENST00000384632 107 ntBASIC-3.59□□□□□ -2.98
ZNF404Q494X3 AC125388.1-201ENST00000459631 156 ntBASIC-3.63□□□□□ -2.99
ZNF404Q494X3 RNU6-986P-201ENST00000363133 102 ntBASIC-3.65□□□□□ -2.99
ZNF404Q494X3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.65□□□□□ -2.99
ZNF404Q494X3 RNU6-753P-201ENST00000363926 107 ntBASIC-3.67□□□□□ -3
ZNF404Q494X3 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.69□□□□□ -3
ZNF404Q494X3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.7□□□□□ -3
ZNF404Q494X3 RNU6-499P-201ENST00000365615 107 ntBASIC-3.72□□□□□ -3
ZNF404Q494X3 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.72□□□□□ -3
ZNF404Q494X3 RNU6-930P-201ENST00000390938 100 ntBASIC-3.74□□□□□ -3.01
ZNF404Q494X3 MIR548F3-201ENST00000408509 87 ntBASIC-3.74□□□□□ -3.01
ZNF404Q494X3 RNU6-936P-201ENST00000384005 107 ntBASIC-3.77□□□□□ -3.01
ZNF404Q494X3 Y_RNA.520-201ENST00000384556 102 ntBASIC-3.77□□□□□ -3.01
ZNF404Q494X3 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.78□□□□□ -3.01
ZNF404Q494X3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.88□□□□□ -3.03
ZNF404Q494X3 RNU4-85P-201ENST00000364675 123 ntBASIC-3.98□□□□□ -3.05
ZNF404Q494X3 RNU6-614P-201ENST00000384369 107 ntBASIC-3.98□□□□□ -3.05
ZNF404Q494X3 U6.59-201ENST00000615686 107 ntBASIC-3.98□□□□□ -3.05
ZNF404Q494X3 RNU6-638P-201ENST00000516582 104 ntBASIC-4□□□□□ -3.05
ZNF404Q494X3 DLEU2_4.2-201ENST00000616613 58 ntBASIC-4□□□□□ -3.05
Retrieved 100 of 98,524 protein–RNA pairs in 305.5 ms