Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-200P-201ENST00000364743 107 ntBASIC-3.49□□□□□ -2.97
TNFP01375 MTCYBP6-201ENST00000441810 138 ntBASIC-3.49□□□□□ -2.97
TNFP01375 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.49□□□□□ -2.97
TNFP01375 MIR4760-201ENST00000585040 80 ntBASIC-3.49□□□□□ -2.97
TNFP01375 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.5□□□□□ -2.97
TNFP01375 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.5□□□□□ -2.97
TNFP01375 RNU6-894P-201ENST00000517094 105 ntBASIC-3.5□□□□□ -2.97
TNFP01375 RNU6-471P-201ENST00000383944 106 ntBASIC-3.51□□□□□ -2.97
TNFP01375 RNU6-886P-201ENST00000384319 105 ntBASIC-3.52□□□□□ -2.97
TNFP01375 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.52□□□□□ -2.97
TNFP01375 RNU6-930P-201ENST00000390938 100 ntBASIC-3.54□□□□□ -2.98
TNFP01375 RNU6-871P-201ENST00000516122 100 ntBASIC-3.54□□□□□ -2.98
TNFP01375 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.55□□□□□ -2.98
TNFP01375 RNU6-463P-201ENST00000384340 107 ntBASIC-3.56□□□□□ -2.98
TNFP01375 AL365222.1-201ENST00000614661 98 ntBASIC-3.56□□□□□ -2.98
TNFP01375 MTCYBP9-201ENST00000431021 303 ntBASIC-3.57□□□□□ -2.98
TNFP01375 MIR4679-1-201ENST00000637619 75 ntBASIC-3.57□□□□□ -2.98
TNFP01375 AC008267.6-201ENST00000441664 139 ntBASIC-3.58□□□□□ -2.98
TNFP01375 AC079150.2-201ENST00000443733 78 ntBASIC-3.58□□□□□ -2.98
TNFP01375 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.59□□□□□ -2.98
TNFP01375 RNY1P5-201ENST00000383890 115 ntBASIC-3.59□□□□□ -2.98
TNFP01375 RNU6-147P-201ENST00000383983 107 ntBASIC-3.61□□□□□ -2.99
TNFP01375 RNU6-242P-201ENST00000384359 107 ntBASIC-3.61□□□□□ -2.99
TNFP01375 MIR1302-3-201ENST00000408128 138 ntBASIC-3.61□□□□□ -2.99
TNFP01375 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.61□□□□□ -2.99
TNFP01375 Y_RNA.193-201ENST00000363979 102 ntBASIC-3.62□□□□□ -2.99
TNFP01375 AC044792.1-201ENST00000593294 196 ntBASIC-3.62□□□□□ -2.99
TNFP01375 RNU6-406P-201ENST00000516470 107 ntBASIC-3.63□□□□□ -2.99
TNFP01375 RNU6-32P-201ENST00000383948 107 ntBASIC-3.64□□□□□ -2.99
TNFP01375 RNU6-13P-201ENST00000384248 107 ntBASIC-3.64□□□□□ -2.99
TNFP01375 RNU6-12P-201ENST00000384604 107 ntBASIC-3.64□□□□□ -2.99
TNFP01375 RNU6-41P-201ENST00000384741 107 ntBASIC-3.64□□□□□ -2.99
TNFP01375 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.64□□□□□ -2.99
TNFP01375 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.65□□□□□ -2.99
TNFP01375 RNU6-892P-201ENST00000410335 99 ntBASIC-3.65□□□□□ -2.99
TNFP01375 RNU6-857P-201ENST00000515893 110 ntBASIC-3.66□□□□□ -3
TNFP01375 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.67□□□□□ -3
TNFP01375 RNU6-936P-201ENST00000384005 107 ntBASIC-3.68□□□□□ -3
TNFP01375 AL117351.2-201ENST00000513571 157 ntBASIC-3.68□□□□□ -3
TNFP01375 AC008737.2-201ENST00000599446 118 ntBASIC-3.68□□□□□ -3
TNFP01375 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.69□□□□□ -3
TNFP01375 MIR450A2-201ENST00000385022 100 ntBASIC-3.69□□□□□ -3
TNFP01375 MIR4503-201ENST00000582187 83 ntBASIC-3.69□□□□□ -3
TNFP01375 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.69□□□□□ -3
TNFP01375 RNU6-623P-201ENST00000363143 105 ntBASIC-3.71□□□□□ -3
TNFP01375 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.71□□□□□ -3
TNFP01375 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.71□□□□□ -3
TNFP01375 RNU6-388P-201ENST00000517012 105 ntBASIC-3.72□□□□□ -3
TNFP01375 RNU6-389P-201ENST00000517048 105 ntBASIC-3.72□□□□□ -3
TNFP01375 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.73□□□□□ -3.01
TNFP01375 SNORA26.2-201ENST00000390922 122 ntBASIC-3.73□□□□□ -3.01
TNFP01375 RNU6-279P-201ENST00000391297 101 ntBASIC-3.73□□□□□ -3.01
TNFP01375 Y_RNA.61-201ENST00000362835 102 ntBASIC-3.74□□□□□ -3.01
TNFP01375 MIR1255A-201ENST00000408338 113 ntBASIC-3.74□□□□□ -3.01
TNFP01375 MT-TD-201ENST00000387419 68 ntBASIC-3.75□□□□□ -3.01
TNFP01375 RNA5SP89-201ENST00000410300 108 ntBASIC-3.76□□□□□ -3.01
TNFP01375 Y_RNA.702-201ENST00000516843 96 ntBASIC-3.76□□□□□ -3.01
TNFP01375 RNU6-738P-201ENST00000384531 106 ntBASIC-3.77□□□□□ -3.01
TNFP01375 MIR606-201ENST00000384851 96 ntBASIC-3.77□□□□□ -3.01
TNFP01375 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.77□□□□□ -3.01
TNFP01375 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.8□□□□□ -3.02
TNFP01375 U6.103-201ENST00000637085 61 ntBASIC-3.8□□□□□ -3.02
TNFP01375 RNU6-573P-201ENST00000383938 106 ntBASIC-3.81□□□□□ -3.02
TNFP01375 RNY4P30-201ENST00000410216 95 ntBASIC-3.82□□□□□ -3.02
TNFP01375 RNA5SP225-201ENST00000410874 135 ntBASIC-3.82□□□□□ -3.02
TNFP01375 RNU6-820P-201ENST00000384273 107 ntBASIC-3.83□□□□□ -3.02
TNFP01375 AP000770.2-201ENST00000623694 100 ntBASIC-3.85□□□□□ -3.03
TNFP01375 MIR3133-201ENST00000583157 78 ntBASIC-3.86□□□□□ -3.03
TNFP01375 RNU6-22P-201ENST00000384355 107 ntBASIC-3.87□□□□□ -3.03
TNFP01375 MIR3202-2-201ENST00000635980 79 ntBASIC-3.87□□□□□ -3.03
TNFP01375 MIR548T-201ENST00000408369 74 ntBASIC-3.88□□□□□ -3.03
TNFP01375 RNU6-499P-201ENST00000365615 107 ntBASIC-3.91□□□□□ -3.04
TNFP01375 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.96□□□□□ -3.04
TNFP01375 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-3.96□□□□□ -3.04
TNFP01375 MIR548S-201ENST00000581352 82 ntBASIC-3.96□□□□□ -3.04
TNFP01375 RNU6-215P-201ENST00000365169 102 ntBASIC-3.97□□□□□ -3.04
TNFP01375 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.97□□□□□ -3.04
TNFP01375 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.97□□□□□ -3.04
TNFP01375 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.97□□□□□ -3.04
TNFP01375 MIR3671-201ENST00000580455 88 ntBASIC-3.98□□□□□ -3.05
TNFP01375 MIR5582-201ENST00000579697 68 ntBASIC-3.99□□□□□ -3.05
TNFP01375 RNU6-133P-201ENST00000383989 107 ntBASIC-4□□□□□ -3.05
TNFP01375 SNORD20-201ENST00000384550 80 ntBASIC-4□□□□□ -3.05
TNFP01375 RNU6-327P-201ENST00000516270 127 ntBASIC-4□□□□□ -3.05
TNFP01375 MT-TG-201ENST00000387429 68 ntBASIC-4.01□□□□□ -3.05
TNFP01375 SNORD78.1-201ENST00000390866 65 ntBASIC-4.02□□□□□ -3.05
TNFP01375 Y_RNA.369-201ENST00000365568 117 ntBASIC-4.04□□□□□ -3.06
TNFP01375 RNU6-44P-201ENST00000384045 107 ntBASIC-4.04□□□□□ -3.06
TNFP01375 MIR4662A-201ENST00000637499 67 ntBASIC-4.04□□□□□ -3.06
TNFP01375 SNORD73B-201ENST00000364394 72 ntBASIC-4.05□□□□□ -3.06
TNFP01375 RNU6-313P-201ENST00000516317 112 ntBASIC-4.06□□□□□ -3.06
TNFP01375 AC026407.1-201ENST00000518369 204 ntBASIC-4.07□□□□□ -3.06
TNFP01375 MIR3908-201ENST00000579798 126 ntBASIC-4.07□□□□□ -3.06
TNFP01375 RNU6-724P-201ENST00000390958 105 ntBASIC-4.08□□□□□ -3.06
TNFP01375 RNY4P29-201ENST00000410801 97 ntBASIC-4.08□□□□□ -3.06
TNFP01375 RNU6-919P-201ENST00000516731 104 ntBASIC-4.08□□□□□ -3.06
TNFP01375 Y_RNA.694-201ENST00000516677 117 ntBASIC-4.1□□□□□ -3.07
TNFP01375 AP001094.1-201ENST00000579805 193 ntBASIC-4.11□□□□□ -3.07
TNFP01375 RNU6-614P-201ENST00000384369 107 ntBASIC-4.14□□□□□ -3.07
TNFP01375 AC125388.1-201ENST00000459631 156 ntBASIC-4.14□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms