Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-1154P-201ENST00000391001 104 ntBASIC-4.95□□□□□ -3.2
HMGB3O15347 U6.111-201ENST00000636093 83 ntBASIC-4.98□□□□□ -3.21
HMGB3O15347 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.99□□□□□ -3.21
HMGB3O15347 RNU6-313P-201ENST00000516317 112 ntBASIC-4.99□□□□□ -3.21
HMGB3O15347 RNU6-787P-201ENST00000384032 107 ntBASIC-5□□□□□ -3.21
HMGB3O15347 Y_RNA.545-201ENST00000384652 105 ntBASIC-5□□□□□ -3.21
HMGB3O15347 RNU6-871P-201ENST00000516122 100 ntBASIC-5□□□□□ -3.21
HMGB3O15347 MIR4679-1-201ENST00000637619 75 ntBASIC-5.01□□□□□ -3.21
HMGB3O15347 MIR494-201ENST00000349529 81 ntBASIC-5.02□□□□□ -3.21
HMGB3O15347 RNU6-539P-201ENST00000516665 103 ntBASIC-5.02□□□□□ -3.21
HMGB3O15347 MIR548H4-201ENST00000408689 111 ntBASIC-5.04□□□□□ -3.22
HMGB3O15347 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.04□□□□□ -3.22
HMGB3O15347 RNU6-776P-201ENST00000364403 104 ntBASIC-5.06□□□□□ -3.22
HMGB3O15347 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.06□□□□□ -3.22
HMGB3O15347 MIR450A2-201ENST00000385022 100 ntBASIC-5.06□□□□□ -3.22
HMGB3O15347 RNU6-788P-201ENST00000390967 104 ntBASIC-5.06□□□□□ -3.22
HMGB3O15347 AC110620.1-201ENST00000416042 228 ntBASIC-5.06□□□□□ -3.22
HMGB3O15347 RNU6-794P-201ENST00000517261 64 ntBASIC-5.1□□□□□ -3.23
HMGB3O15347 RNU6-422P-201ENST00000384632 107 ntBASIC-5.11□□□□□ -3.23
HMGB3O15347 RNU6-209P-201ENST00000384118 107 ntBASIC-5.13□□□□□ -3.23
HMGB3O15347 AC090425.1-201ENST00000610007 140 ntBASIC-5.14□□□□□ -3.23
HMGB3O15347 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.15□□□□□ -3.23
HMGB3O15347 MIR548AL-201ENST00000578416 97 ntBASIC-5.18□□□□□ -3.24
HMGB3O15347 RNA5SP89-201ENST00000410300 108 ntBASIC-5.19□□□□□ -3.24
HMGB3O15347 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.19□□□□□ -3.24
HMGB3O15347 MIR545-201ENST00000385085 106 ntBASIC-5.2□□□□□ -3.24
HMGB3O15347 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.23□□□□□ -3.25
HMGB3O15347 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.23□□□□□ -3.25
HMGB3O15347 RNY4P30-201ENST00000410216 95 ntBASIC-5.23□□□□□ -3.25
HMGB3O15347 RNU6-820P-201ENST00000384273 107 ntBASIC-5.24□□□□□ -3.25
HMGB3O15347 RNU6-919P-201ENST00000516731 104 ntBASIC-5.25□□□□□ -3.25
HMGB3O15347 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.29□□□□□ -3.26
HMGB3O15347 RNU6-215P-201ENST00000365169 102 ntBASIC-5.29□□□□□ -3.26
HMGB3O15347 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.29□□□□□ -3.26
HMGB3O15347 RNA5SP449-201ENST00000516871 130 ntBASIC-5.29□□□□□ -3.26
HMGB3O15347 RNU6-446P-201ENST00000362827 106 ntBASIC-5.3□□□□□ -3.26
HMGB3O15347 RNU4-33P-201ENST00000364316 85 ntBASIC-5.31□□□□□ -3.26
HMGB3O15347 RNU6-294P-201ENST00000364999 102 ntBASIC-5.32□□□□□ -3.26
HMGB3O15347 RNU6-406P-201ENST00000516470 107 ntBASIC-5.33□□□□□ -3.26
HMGB3O15347 RNU4-85P-201ENST00000364675 123 ntBASIC-5.35□□□□□ -3.27
HMGB3O15347 SNORD20-201ENST00000384550 80 ntBASIC-5.35□□□□□ -3.27
HMGB3O15347 RNU6-808P-201ENST00000391233 108 ntBASIC-5.35□□□□□ -3.27
HMGB3O15347 AC114801.3-201ENST00000510231 177 ntBASIC-5.35□□□□□ -3.27
HMGB3O15347 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.36□□□□□ -3.27
HMGB3O15347 MIR363-201ENST00000384840 75 ntBASIC-5.38□□□□□ -3.27
HMGB3O15347 MIR3202-2-201ENST00000635980 79 ntBASIC-5.42□□□□□ -3.28
HMGB3O15347 RNU6-471P-201ENST00000383944 106 ntBASIC-5.43□□□□□ -3.28
HMGB3O15347 AC099654.10-201ENST00000640395 161 ntBASIC-5.43□□□□□ -3.28
HMGB3O15347 RNU6-857P-201ENST00000515893 110 ntBASIC-5.44□□□□□ -3.28
HMGB3O15347 Y_RNA.694-201ENST00000516677 117 ntBASIC-5.44□□□□□ -3.28
HMGB3O15347 SNORD113-1-201ENST00000365321 69 ntBASIC-5.45□□□□□ -3.28
HMGB3O15347 RNU6-153P-201ENST00000364422 104 ntBASIC-5.47□□□□□ -3.29
HMGB3O15347 MIR548M-201ENST00000408260 86 ntBASIC-5.47□□□□□ -3.29
HMGB3O15347 SNORD113-4-201ENST00000364802 75 ntBASIC-5.48□□□□□ -3.29
HMGB3O15347 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.48□□□□□ -3.29
HMGB3O15347 RNU6-44P-201ENST00000384045 107 ntBASIC-5.5□□□□□ -3.29
HMGB3O15347 RNU6-279P-201ENST00000391297 101 ntBASIC-5.5□□□□□ -3.29
HMGB3O15347 MIR3910-1-201ENST00000580936 111 ntBASIC-5.5□□□□□ -3.29
HMGB3O15347 MIR4719-201ENST00000585233 84 ntBASIC-5.51□□□□□ -3.29
HMGB3O15347 Y_RNA.81-201ENST00000362997 102 ntBASIC-5.53□□□□□ -3.29
HMGB3O15347 Y_RNA.165-201ENST00000363721 102 ntBASIC-5.56□□□□□ -3.3
HMGB3O15347 Y_RNA.369-201ENST00000365568 117 ntBASIC-5.58□□□□□ -3.3
HMGB3O15347 Y_RNA.565-201ENST00000384719 101 ntBASIC-5.59□□□□□ -3.3
HMGB3O15347 RNU6-59P-201ENST00000384787 107 ntBASIC-5.59□□□□□ -3.3
HMGB3O15347 MIR1255A-201ENST00000408338 113 ntBASIC-5.59□□□□□ -3.3
HMGB3O15347 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.6□□□□□ -3.31
HMGB3O15347 RNU6-838P-201ENST00000363399 108 ntBASIC-5.61□□□□□ -3.31
HMGB3O15347 MIR5582-201ENST00000579697 68 ntBASIC-5.63□□□□□ -3.31
HMGB3O15347 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.66□□□□□ -3.32
HMGB3O15347 RNU6-916P-201ENST00000516088 109 ntBASIC-5.67□□□□□ -3.32
HMGB3O15347 RNU6-829P-201ENST00000363700 112 ntBASIC-5.68□□□□□ -3.32
HMGB3O15347 AL606753.1-201ENST00000427435 87 ntBASIC-5.72□□□□□ -3.33
HMGB3O15347 RNU6-573P-201ENST00000383938 106 ntBASIC-5.74□□□□□ -3.33
HMGB3O15347 SNORA26.2-201ENST00000390922 122 ntBASIC-5.74□□□□□ -3.33
HMGB3O15347 RNU6-986P-201ENST00000363133 102 ntBASIC-5.76□□□□□ -3.33
HMGB3O15347 MIR633-201ENST00000384821 98 ntBASIC-5.78□□□□□ -3.33
HMGB3O15347 MIR4662A-201ENST00000637499 67 ntBASIC-5.78□□□□□ -3.33
HMGB3O15347 MIR3668-201ENST00000582138 75 ntBASIC-5.79□□□□□ -3.34
HMGB3O15347 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.83□□□□□ -3.34
HMGB3O15347 SNORD73B-201ENST00000364394 72 ntBASIC-5.88□□□□□ -3.35
HMGB3O15347 MT-TR-201ENST00000387439 65 ntBASIC-5.89□□□□□ -3.35
HMGB3O15347 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.9□□□□□ -3.35
HMGB3O15347 SNORD78.1-201ENST00000390866 65 ntBASIC-5.91□□□□□ -3.36
HMGB3O15347 RNA5SP225-201ENST00000410874 135 ntBASIC-5.91□□□□□ -3.36
HMGB3O15347 RNY4P29-201ENST00000410801 97 ntBASIC-5.94□□□□□ -3.36
HMGB3O15347 RNU6-627P-201ENST00000364032 102 ntBASIC-5.95□□□□□ -3.36
HMGB3O15347 Y_RNA.388-201ENST00000383919 113 ntBASIC-5.98□□□□□ -3.37
HMGB3O15347 snosnR66.1-201ENST00000391095 99 ntBASIC-5.98□□□□□ -3.37
HMGB3O15347 AC079150.2-201ENST00000443733 78 ntBASIC-5.99□□□□□ -3.37
HMGB3O15347 RNU6-753P-201ENST00000363926 107 ntBASIC-6.02□□□□□ -3.37
HMGB3O15347 MIR3671-201ENST00000580455 88 ntBASIC-6.02□□□□□ -3.37
HMGB3O15347 MIR548F3-201ENST00000408509 87 ntBASIC-6.09□□□□□ -3.38
HMGB3O15347 RNU6-930P-201ENST00000390938 100 ntBASIC-6.1□□□□□ -3.39
HMGB3O15347 RNU6-620P-201ENST00000384017 96 ntBASIC-6.17□□□□□ -3.4
HMGB3O15347 RNA5SP170-201ENST00000517150 101 ntBASIC-6.22□□□□□ -3.41
HMGB3O15347 RNU6-936P-201ENST00000384005 107 ntBASIC-6.24□□□□□ -3.41
HMGB3O15347 AC125388.1-201ENST00000459631 156 ntBASIC-6.27□□□□□ -3.41
HMGB3O15347 RNU6-1298P-201ENST00000362456 101 ntBASIC-6.29□□□□□ -3.42
HMGB3O15347 RNU6-499P-201ENST00000365615 107 ntBASIC-6.29□□□□□ -3.42
HMGB3O15347 SNORD111B-201ENST00000408587 80 ntBASIC-6.34□□□□□ -3.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms