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Protein–RNA interactions for Protein: O15259
NPHP1, Nephrocystin-1, human
Predictions only
Length
732 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
NPHP1
O15259
RNU6-119P-201
ENST00000364882
107 nt
BASIC
-2.59
□□□□□ -2.82
NPHP1
O15259
Y_RNA.722-201
ENST00000517279
114 nt
BASIC
-2.59
□□□□□ -2.82
NPHP1
O15259
Y_RNA.63-201
ENST00000362841
102 nt
BASIC
-2.6
□□□□□ -2.83
NPHP1
O15259
Y_RNA.475-201
ENST00000384345
101 nt
BASIC
-2.62
□□□□□ -2.83
NPHP1
O15259
RNU6-638P-201
ENST00000516582
104 nt
BASIC
-2.64
□□□□□ -2.83
NPHP1
O15259
RNU6-1277P-201
ENST00000364561
107 nt
BASIC
-2.65
□□□□□ -2.83
NPHP1
O15259
AL731768.1-201
ENST00000603124
139 nt
BASIC
-2.65
□□□□□ -2.83
NPHP1
O15259
Y_RNA.59-201
ENST00000362828
102 nt
BASIC
-2.66
□□□□□ -2.84
NPHP1
O15259
Y_RNA.397-201
ENST00000383950
98 nt
BASIC
-2.66
□□□□□ -2.84
NPHP1
O15259
Y_RNA.382-201
ENST00000365672
114 nt
BASIC
-2.67
□□□□□ -2.84
NPHP1
O15259
SNORD113-4-201
ENST00000364802
75 nt
BASIC
-2.69
□□□□□ -2.84
NPHP1
O15259
RNU6-230P-201
ENST00000362457
104 nt
BASIC
-2.7
□□□□□ -2.84
NPHP1
O15259
RNU6-822P-201
ENST00000362707
106 nt
BASIC
-2.7
□□□□□ -2.84
NPHP1
O15259
RNU6-829P-201
ENST00000363700
112 nt
BASIC
-2.7
□□□□□ -2.84
NPHP1
O15259
MIR633-201
ENST00000384821
98 nt
BASIC
-2.71
□□□□□ -2.84
NPHP1
O15259
AC125388.1-201
ENST00000459631
156 nt
BASIC
-2.72
□□□□□ -2.84
NPHP1
O15259
AC139453.2-201
ENST00000487255
133 nt
BASIC
-2.72
□□□□□ -2.84
NPHP1
O15259
SNORD54-201
ENST00000459159
67 nt
BASIC
-2.73
□□□□□ -2.85
NPHP1
O15259
MIR5693-201
ENST00000577722
73 nt
BASIC
-2.75
□□□□□ -2.85
NPHP1
O15259
TRAJ42-201
ENST00000390495
66 nt
APPRIS P1
BASIC
-2.76
□□□□□ -2.85
NPHP1
O15259
RNU4-33P-201
ENST00000364316
85 nt
BASIC
-2.77
□□□□□ -2.85
NPHP1
O15259
MIR548H4-201
ENST00000408689
111 nt
BASIC
-2.77
□□□□□ -2.85
NPHP1
O15259
Y_RNA.228-201
ENST00000364346
98 nt
BASIC
-2.78
□□□□□ -2.85
NPHP1
O15259
RNY4P25-201
ENST00000459254
96 nt
BASIC
-2.78
□□□□□ -2.85
NPHP1
O15259
MIR4317-201
ENST00000637586
65 nt
BASIC
-2.78
□□□□□ -2.85
NPHP1
O15259
RNA5SP224-201
ENST00000365069
126 nt
BASIC
-2.79
□□□□□ -2.86
NPHP1
O15259
MIRLET7A3-201
ENST00000362116
74 nt
BASIC
-2.81
□□□□□ -2.86
NPHP1
O15259
Y_RNA.206-201
ENST00000364136
102 nt
BASIC
-2.81
□□□□□ -2.86
NPHP1
O15259
Y_RNA.260-201
ENST00000364628
101 nt
BASIC
-2.82
□□□□□ -2.86
NPHP1
O15259
MIR656-201
ENST00000385224
78 nt
BASIC
-2.82
□□□□□ -2.86
NPHP1
O15259
AC079150.2-201
ENST00000443733
78 nt
BASIC
-2.84
□□□□□ -2.86
NPHP1
O15259
MIR548AL-201
ENST00000578416
97 nt
BASIC
-2.85
□□□□□ -2.87
NPHP1
O15259
Y_RNA.79-201
ENST00000362992
113 nt
BASIC
-2.86
□□□□□ -2.87
NPHP1
O15259
Y_RNA.134-201
ENST00000363435
105 nt
BASIC
-2.86
□□□□□ -2.87
NPHP1
O15259
RNU6-854P-201
ENST00000364036
107 nt
BASIC
-2.86
□□□□□ -2.87
NPHP1
O15259
SNORD45C-201
ENST00000383893
79 nt
BASIC
-2.86
□□□□□ -2.87
NPHP1
O15259
AL359920.1-201
ENST00000618332
176 nt
BASIC
-2.86
□□□□□ -2.87
NPHP1
O15259
RNU6-737P-201
ENST00000365370
107 nt
BASIC
-2.87
□□□□□ -2.87
NPHP1
O15259
RNA5SP93-201
ENST00000362525
114 nt
BASIC
-2.88
□□□□□ -2.87
NPHP1
O15259
SNORD115.2-201
ENST00000391126
59 nt
BASIC
-2.88
□□□□□ -2.87
NPHP1
O15259
Y_RNA.612-201
ENST00000410717
95 nt
BASIC
-2.88
□□□□□ -2.87
NPHP1
O15259
RNU6-836P-201
ENST00000362920
107 nt
BASIC
-2.89
□□□□□ -2.87
NPHP1
O15259
Y_RNA.663-201
ENST00000516043
101 nt
BASIC
-2.9
□□□□□ -2.87
NPHP1
O15259
RNU6-1326P-201
ENST00000391262
107 nt
BASIC
-2.92
□□□□□ -2.88
NPHP1
O15259
Y_RNA.652-201
ENST00000458902
102 nt
BASIC
-2.93
□□□□□ -2.88
NPHP1
O15259
RNU6-1340P-201
ENST00000384438
107 nt
BASIC
-2.94
□□□□□ -2.88
NPHP1
O15259
Y_RNA.830-201
ENST00000628531
96 nt
BASIC
-2.94
□□□□□ -2.88
NPHP1
O15259
RNU6-499P-201
ENST00000365615
107 nt
BASIC
-2.95
□□□□□ -2.88
NPHP1
O15259
RNU6-1008P-201
ENST00000384160
104 nt
BASIC
-2.95
□□□□□ -2.88
NPHP1
O15259
RNU6-1191P-201
ENST00000516799
107 nt
BASIC
-2.95
□□□□□ -2.88
NPHP1
O15259
Y_RNA.53-201
ENST00000362765
102 nt
BASIC
-2.96
□□□□□ -2.88
NPHP1
O15259
RNY4P7-201
ENST00000364600
96 nt
BASIC
-2.97
□□□□□ -2.88
NPHP1
O15259
Y_RNA.345-201
ENST00000365384
92 nt
BASIC
-2.97
□□□□□ -2.88
NPHP1
O15259
Y_RNA.266-201
ENST00000364678
96 nt
BASIC
-2.98
□□□□□ -2.89
NPHP1
O15259
Y_RNA.335-201
ENST00000365299
96 nt
BASIC
-2.98
□□□□□ -2.89
NPHP1
O15259
RNU6-1204P-201
ENST00000363948
107 nt
BASIC
-2.99
□□□□□ -2.89
NPHP1
O15259
Y_RNA.403-201
ENST00000383977
101 nt
BASIC
-2.99
□□□□□ -2.89
NPHP1
O15259
RNU6-808P-201
ENST00000391233
108 nt
BASIC
-2.99
□□□□□ -2.89
NPHP1
O15259
SNORD114-13-201
ENST00000364377
74 nt
BASIC
-3.01
□□□□□ -2.89
NPHP1
O15259
RNU6-1044P-201
ENST00000384755
107 nt
BASIC
-3.02
□□□□□ -2.89
NPHP1
O15259
RNU6-1161P-201
ENST00000516176
102 nt
BASIC
-3.02
□□□□□ -2.89
NPHP1
O15259
MIR124-1-201
ENST00000385275
85 nt
BASIC
-3.03
□□□□□ -2.89
NPHP1
O15259
Y_RNA.421-201
ENST00000384052
101 nt
BASIC
-3.04
□□□□□ -2.9
NPHP1
O15259
SNORD115-45-201
ENST00000391078
81 nt
BASIC
-3.04
□□□□□ -2.9
NPHP1
O15259
RNU6-838P-201
ENST00000363399
108 nt
BASIC
-3.05
□□□□□ -2.9
NPHP1
O15259
RNU6-788P-201
ENST00000390967
104 nt
BASIC
-3.05
□□□□□ -2.9
NPHP1
O15259
Y_RNA.379-201
ENST00000365653
102 nt
BASIC
-3.08
□□□□□ -2.9
NPHP1
O15259
MIR545-201
ENST00000385085
106 nt
BASIC
-3.08
□□□□□ -2.9
NPHP1
O15259
Y_RNA.658-201
ENST00000515990
97 nt
BASIC
-3.12
□□□□□ -2.91
NPHP1
O15259
MIR548AH-201
ENST00000637109
76 nt
BASIC
-3.12
□□□□□ -2.91
NPHP1
O15259
Y_RNA.137-201
ENST00000363455
112 nt
BASIC
-3.13
□□□□□ -2.91
NPHP1
O15259
RNU6-986P-201
ENST00000363133
102 nt
BASIC
-3.14
□□□□□ -2.91
NPHP1
O15259
RNU6-59P-201
ENST00000384787
107 nt
BASIC
-3.14
□□□□□ -2.91
NPHP1
O15259
RNU6-936P-201
ENST00000384005
107 nt
BASIC
-3.16
□□□□□ -2.92
NPHP1
O15259
RNU6-753P-201
ENST00000363926
107 nt
BASIC
-3.17
□□□□□ -2.92
NPHP1
O15259
RNU6-803P-201
ENST00000516034
102 nt
BASIC
-3.21
□□□□□ -2.92
NPHP1
O15259
Y_RNA.186-201
ENST00000363899
92 nt
BASIC
-3.22
□□□□□ -2.92
NPHP1
O15259
Y_RNA.204-201
ENST00000364112
102 nt
BASIC
-3.22
□□□□□ -2.92
NPHP1
O15259
MIR509-1-201
ENST00000385265
94 nt
BASIC
-3.22
□□□□□ -2.92
NPHP1
O15259
MIR509-2-201
ENST00000390724
91 nt
BASIC
-3.22
□□□□□ -2.92
NPHP1
O15259
RNU6-422P-201
ENST00000384632
107 nt
BASIC
-3.24
□□□□□ -2.93
NPHP1
O15259
RNU6-614P-201
ENST00000384369
107 nt
BASIC
-3.26
□□□□□ -2.93
NPHP1
O15259
U6.59-201
ENST00000615686
107 nt
BASIC
-3.26
□□□□□ -2.93
NPHP1
O15259
MIR548F3-201
ENST00000408509
87 nt
BASIC
-3.28
□□□□□ -2.93
NPHP1
O15259
RNU6-930P-201
ENST00000390938
100 nt
BASIC
-3.29
□□□□□ -2.94
NPHP1
O15259
RNY4-201
ENST00000516507
96 nt
BASIC
-3.31
□□□□□ -2.94
NPHP1
O15259
RNU6-1043P-201
ENST00000410355
99 nt
BASIC
-3.32
□□□□□ -2.94
NPHP1
O15259
RNA5SP106-201
ENST00000517274
100 nt
BASIC
-3.33
□□□□□ -2.94
NPHP1
O15259
Y_RNA.511-201
ENST00000384514
103 nt
BASIC
-3.34
□□□□□ -2.94
NPHP1
O15259
RNY4P10-201
ENST00000365571
96 nt
BASIC
-3.37
□□□□□ -2.95
NPHP1
O15259
Y_RNA.406-201
ENST00000383984
100 nt
BASIC
-3.39
□□□□□ -2.95
NPHP1
O15259
RNU6-987P-201
ENST00000384759
104 nt
BASIC
-3.39
□□□□□ -2.95
NPHP1
O15259
Y_RNA.657-201
ENST00000515983
102 nt
BASIC
-3.41
□□□□□ -2.96
NPHP1
O15259
RNU6-665P-201
ENST00000384639
107 nt
BASIC
-3.47
□□□□□ -2.96
NPHP1
O15259
DLEU2_4.2-201
ENST00000616613
58 nt
BASIC
-3.54
□□□□□ -2.98
NPHP1
O15259
MTND4LP19-201
ENST00000403051
166 nt
BASIC
-3.56
□□□□□ -2.98
NPHP1
O15259
Y_RNA.566-201
ENST00000384735
101 nt
BASIC
-3.57
□□□□□ -2.98
NPHP1
O15259
RNU6-1121P-201
ENST00000516802
109 nt
BASIC
-3.59
□□□□□ -2.98
NPHP1
O15259
SOX2OT_exon4.1-201
ENST00000610449
109 nt
BASIC
-3.59
□□□□□ -2.98
NPHP1
O15259
RNU6-1024P-201
ENST00000384199
107 nt
BASIC
-3.62
□□□□□ -2.99
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