Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNU6-315P-201ENST00000362666 107 ntBASIC-4.51□□□□□ -3.13
HLA-DRB4X5D2U9 Y_RNA.489-201ENST00000384410 101 ntBASIC-4.51□□□□□ -3.13
HLA-DRB4X5D2U9 AL353621.2-201ENST00000605340 133 ntBASIC-4.51□□□□□ -3.13
HLA-DRB4X5D2U9 MIR606-201ENST00000384851 96 ntBASIC-4.52□□□□□ -3.13
HLA-DRB4X5D2U9 MIR545-201ENST00000385085 106 ntBASIC-4.53□□□□□ -3.13
HLA-DRB4X5D2U9 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.53□□□□□ -3.13
HLA-DRB4X5D2U9 RNU6-419P-201ENST00000517030 63 ntBASIC-4.53□□□□□ -3.13
HLA-DRB4X5D2U9 RNU6-1015P-201ENST00000517121 99 ntBASIC-4.54□□□□□ -3.14
HLA-DRB4X5D2U9 Y_RNA.193-201ENST00000363979 102 ntBASIC-4.56□□□□□ -3.14
HLA-DRB4X5D2U9 RNU6-797P-201ENST00000363101 109 ntBASIC-4.57□□□□□ -3.14
HLA-DRB4X5D2U9 MIR363-201ENST00000384840 75 ntBASIC-4.57□□□□□ -3.14
HLA-DRB4X5D2U9 RNU6-70P-201ENST00000516438 60 ntBASIC-4.57□□□□□ -3.14
HLA-DRB4X5D2U9 Y_RNA.61-201ENST00000362835 102 ntBASIC-4.58□□□□□ -3.14
HLA-DRB4X5D2U9 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.58□□□□□ -3.14
HLA-DRB4X5D2U9 RNU7-119P-201ENST00000459279 63 ntBASIC-4.58□□□□□ -3.14
HLA-DRB4X5D2U9 RNU7-200P-201ENST00000516105 62 ntBASIC-4.58□□□□□ -3.14
HLA-DRB4X5D2U9 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.61□□□□□ -3.15
HLA-DRB4X5D2U9 MALAT1.1-201ENST00000618249 95 ntBASIC-4.61□□□□□ -3.15
HLA-DRB4X5D2U9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.61□□□□□ -3.15
HLA-DRB4X5D2U9 SNORD116-14-201ENST00000383894 92 ntBASIC-4.62□□□□□ -3.15
HLA-DRB4X5D2U9 SNORD116-17-201ENST00000383929 92 ntBASIC-4.62□□□□□ -3.15
HLA-DRB4X5D2U9 SNORD116-15-201ENST00000384445 92 ntBASIC-4.62□□□□□ -3.15
HLA-DRB4X5D2U9 SNORD116-19-201ENST00000384729 92 ntBASIC-4.62□□□□□ -3.15
HLA-DRB4X5D2U9 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.63□□□□□ -3.15
HLA-DRB4X5D2U9 MIR4317-201ENST00000637586 65 ntBASIC-4.64□□□□□ -3.15
HLA-DRB4X5D2U9 RNU6-738P-201ENST00000384531 106 ntBASIC-4.65□□□□□ -3.15
HLA-DRB4X5D2U9 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.66□□□□□ -3.16
HLA-DRB4X5D2U9 RNU6-675P-201ENST00000384236 104 ntBASIC-4.66□□□□□ -3.16
HLA-DRB4X5D2U9 RNU6-122P-201ENST00000516818 107 ntBASIC-4.66□□□□□ -3.16
HLA-DRB4X5D2U9 MIR4801-201ENST00000582704 82 ntBASIC-4.67□□□□□ -3.16
HLA-DRB4X5D2U9 RNU6-907P-201ENST00000390924 102 ntBASIC-4.68□□□□□ -3.16
HLA-DRB4X5D2U9 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.69□□□□□ -3.16
HLA-DRB4X5D2U9 RNU6-379P-201ENST00000363813 104 ntBASIC-4.71□□□□□ -3.16
HLA-DRB4X5D2U9 RNU6-886P-201ENST00000384319 105 ntBASIC-4.71□□□□□ -3.16
HLA-DRB4X5D2U9 MIR548H4-201ENST00000408689 111 ntBASIC-4.72□□□□□ -3.17
HLA-DRB4X5D2U9 RNU6-255P-201ENST00000516957 105 ntBASIC-4.72□□□□□ -3.17
HLA-DRB4X5D2U9 SNORA25.5-201ENST00000363782 126 ntBASIC-4.73□□□□□ -3.17
HLA-DRB4X5D2U9 MIR4503-201ENST00000582187 83 ntBASIC-4.73□□□□□ -3.17
HLA-DRB4X5D2U9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-4.74□□□□□ -3.17
HLA-DRB4X5D2U9 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.75□□□□□ -3.17
HLA-DRB4X5D2U9 RNU6-346P-201ENST00000516288 111 ntBASIC-4.75□□□□□ -3.17
HLA-DRB4X5D2U9 SNORA40.13-201ENST00000516379 120 ntBASIC-4.75□□□□□ -3.17
HLA-DRB4X5D2U9 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.75□□□□□ -3.17
HLA-DRB4X5D2U9 RNU6-776P-201ENST00000364403 104 ntBASIC-4.76□□□□□ -3.17
HLA-DRB4X5D2U9 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.76□□□□□ -3.17
HLA-DRB4X5D2U9 RNY1P5-201ENST00000383890 115 ntBASIC-4.79□□□□□ -3.18
HLA-DRB4X5D2U9 RNU6-687P-201ENST00000516443 89 ntBASIC-4.79□□□□□ -3.18
HLA-DRB4X5D2U9 RNU6-844P-201ENST00000517175 102 ntBASIC-4.8□□□□□ -3.18
HLA-DRB4X5D2U9 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.8□□□□□ -3.18
HLA-DRB4X5D2U9 RNU6-979P-201ENST00000383896 107 ntBASIC-4.81□□□□□ -3.18
HLA-DRB4X5D2U9 AL031737.1-201ENST00000450125 223 ntBASIC-4.81□□□□□ -3.18
HLA-DRB4X5D2U9 RNU6-388P-201ENST00000517012 105 ntBASIC-4.82□□□□□ -3.18
HLA-DRB4X5D2U9 RNU6-389P-201ENST00000517048 105 ntBASIC-4.82□□□□□ -3.18
HLA-DRB4X5D2U9 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.83□□□□□ -3.18
HLA-DRB4X5D2U9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.83□□□□□ -3.18
HLA-DRB4X5D2U9 AL117351.2-201ENST00000513571 157 ntBASIC-4.83□□□□□ -3.18
HLA-DRB4X5D2U9 MIR4712-201ENST00000583750 82 ntBASIC-4.83□□□□□ -3.18
HLA-DRB4X5D2U9 RNU6-916P-201ENST00000516088 109 ntBASIC-4.84□□□□□ -3.18
HLA-DRB4X5D2U9 RNU6-589P-201ENST00000516485 107 ntBASIC-4.84□□□□□ -3.18
HLA-DRB4X5D2U9 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.84□□□□□ -3.18
HLA-DRB4X5D2U9 MIR3134-201ENST00000579433 74 ntBASIC-4.84□□□□□ -3.18
HLA-DRB4X5D2U9 MIR450A1-201ENST00000362262 91 ntBASIC-4.86□□□□□ -3.19
HLA-DRB4X5D2U9 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.86□□□□□ -3.19
HLA-DRB4X5D2U9 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.88□□□□□ -3.19
HLA-DRB4X5D2U9 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.89□□□□□ -3.19
HLA-DRB4X5D2U9 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.89□□□□□ -3.19
HLA-DRB4X5D2U9 MIR1245B-201ENST00000636115 69 ntBASIC-4.89□□□□□ -3.19
HLA-DRB4X5D2U9 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.9□□□□□ -3.19
HLA-DRB4X5D2U9 Y_RNA.565-201ENST00000384719 101 ntBASIC-4.9□□□□□ -3.19
HLA-DRB4X5D2U9 MIR548X-201ENST00000580069 75 ntBASIC-4.9□□□□□ -3.19
HLA-DRB4X5D2U9 MIR5588-201ENST00000581890 63 ntBASIC-4.91□□□□□ -3.2
HLA-DRB4X5D2U9 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.92□□□□□ -3.2
HLA-DRB4X5D2U9 MIR488-201ENST00000365739 83 ntBASIC-4.92□□□□□ -3.2
HLA-DRB4X5D2U9 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.93□□□□□ -3.2
HLA-DRB4X5D2U9 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.93□□□□□ -3.2
HLA-DRB4X5D2U9 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.93□□□□□ -3.2
HLA-DRB4X5D2U9 RNU6-940P-201ENST00000363433 104 ntBASIC-4.94□□□□□ -3.2
HLA-DRB4X5D2U9 RNU6-411P-201ENST00000384451 107 ntBASIC-4.94□□□□□ -3.2
HLA-DRB4X5D2U9 RNU6-663P-201ENST00000391105 106 ntBASIC-4.94□□□□□ -3.2
HLA-DRB4X5D2U9 IGLL4P-201ENST00000614590 133 ntBASIC-4.94□□□□□ -3.2
HLA-DRB4X5D2U9 SNORA25.4-201ENST00000363666 124 ntBASIC-4.96□□□□□ -3.2
HLA-DRB4X5D2U9 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.98□□□□□ -3.21
HLA-DRB4X5D2U9 MIR3938-201ENST00000582157 103 ntBASIC-4.98□□□□□ -3.21
HLA-DRB4X5D2U9 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.99□□□□□ -3.21
HLA-DRB4X5D2U9 RNU6-327P-201ENST00000516270 127 ntBASIC-4.99□□□□□ -3.21
HLA-DRB4X5D2U9 AC008267.6-201ENST00000441664 139 ntBASIC-5□□□□□ -3.21
HLA-DRB4X5D2U9 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.01□□□□□ -3.21
HLA-DRB4X5D2U9 RNU6-634P-201ENST00000459134 106 ntBASIC-5.02□□□□□ -3.21
HLA-DRB4X5D2U9 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.03□□□□□ -3.21
HLA-DRB4X5D2U9 RNU7-171P-201ENST00000459581 62 ntBASIC-5.03□□□□□ -3.21
HLA-DRB4X5D2U9 MIR548AL-201ENST00000578416 97 ntBASIC-5.04□□□□□ -3.22
HLA-DRB4X5D2U9 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.05□□□□□ -3.22
HLA-DRB4X5D2U9 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.05□□□□□ -3.22
HLA-DRB4X5D2U9 RNU6-640P-201ENST00000363693 105 ntBASIC-5.08□□□□□ -3.22
HLA-DRB4X5D2U9 RNU6-463P-201ENST00000384340 107 ntBASIC-5.08□□□□□ -3.22
HLA-DRB4X5D2U9 MT-TG-201ENST00000387429 68 ntBASIC-5.08□□□□□ -3.22
HLA-DRB4X5D2U9 MIR4511-201ENST00000582784 87 ntBASIC-5.1□□□□□ -3.23
HLA-DRB4X5D2U9 RNU6-1045P-201ENST00000516321 107 ntBASIC-5.12□□□□□ -3.23
HLA-DRB4X5D2U9 RNU6-808P-201ENST00000391233 108 ntBASIC-5.13□□□□□ -3.23
HLA-DRB4X5D2U9 AC103706.3-201ENST00000636297 85 ntBASIC-5.13□□□□□ -3.23
Retrieved 100 of 98,524 protein–RNA pairs in 255.5 ms