Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-300P-201ENST00000459080 104 ntBASIC-2.16□□□□□ -2.76
SHROOM4Q9ULL8 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.16□□□□□ -2.76
SHROOM4Q9ULL8 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.17□□□□□ -2.76
SHROOM4Q9ULL8 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.18□□□□□ -2.76
SHROOM4Q9ULL8 SNORA40B-201ENST00000385573 128 ntBASIC-2.19□□□□□ -2.76
SHROOM4Q9ULL8 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 SNORD45.2-201ENST00000363552 72 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 SNORD20-201ENST00000384550 80 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 RNU6-742P-201ENST00000365289 107 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 RNU6-675P-201ENST00000384236 104 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 SNORA40.16-201ENST00000517238 121 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 MIR5693-201ENST00000577722 73 ntBASIC-2.2□□□□□ -2.76
SHROOM4Q9ULL8 RNU6-176P-201ENST00000517196 105 ntBASIC-2.21□□□□□ -2.76
SHROOM4Q9ULL8 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.22□□□□□ -2.77
SHROOM4Q9ULL8 RNU6-315P-201ENST00000362666 107 ntBASIC-2.22□□□□□ -2.77
SHROOM4Q9ULL8 AL451105.1-201ENST00000450005 189 ntBASIC-2.22□□□□□ -2.77
SHROOM4Q9ULL8 MIR488-201ENST00000365739 83 ntBASIC-2.23□□□□□ -2.77
SHROOM4Q9ULL8 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.23□□□□□ -2.77
SHROOM4Q9ULL8 MIR3134-201ENST00000579433 74 ntBASIC-2.23□□□□□ -2.77
SHROOM4Q9ULL8 RNU6-147P-201ENST00000383983 107 ntBASIC-2.24□□□□□ -2.77
SHROOM4Q9ULL8 RNY4P25-201ENST00000459254 96 ntBASIC-2.24□□□□□ -2.77
SHROOM4Q9ULL8 AL731768.1-201ENST00000603124 139 ntBASIC-2.24□□□□□ -2.77
SHROOM4Q9ULL8 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.24□□□□□ -2.77
SHROOM4Q9ULL8 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.25□□□□□ -2.77
SHROOM4Q9ULL8 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.25□□□□□ -2.77
SHROOM4Q9ULL8 RNU6-215P-201ENST00000365169 102 ntBASIC-2.25□□□□□ -2.77
SHROOM4Q9ULL8 RNU6-687P-201ENST00000516443 89 ntBASIC-2.25□□□□□ -2.77
SHROOM4Q9ULL8 RNU6-345P-201ENST00000517001 107 ntBASIC-2.25□□□□□ -2.77
SHROOM4Q9ULL8 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.26□□□□□ -2.77
SHROOM4Q9ULL8 SNORA25.5-201ENST00000363782 126 ntBASIC-2.27□□□□□ -2.77
SHROOM4Q9ULL8 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.28□□□□□ -2.77
SHROOM4Q9ULL8 IGLL4P-201ENST00000614590 133 ntBASIC-2.28□□□□□ -2.77
SHROOM4Q9ULL8 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.29□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-979P-201ENST00000383896 107 ntBASIC-2.3□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-419P-201ENST00000517030 63 ntBASIC-2.3□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-844P-201ENST00000517175 102 ntBASIC-2.3□□□□□ -2.78
SHROOM4Q9ULL8 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.31□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.31□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-800P-201ENST00000384473 103 ntBASIC-2.32□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-122P-201ENST00000516818 107 ntBASIC-2.32□□□□□ -2.78
SHROOM4Q9ULL8 MIR5588-201ENST00000581890 63 ntBASIC-2.32□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-640P-201ENST00000363693 105 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 RNU7-119P-201ENST00000459279 63 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 MIR1245B-201ENST00000636115 69 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 MIR4712-201ENST00000583750 82 ntBASIC-2.33□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.34□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-411P-201ENST00000384451 107 ntBASIC-2.34□□□□□ -2.78
SHROOM4Q9ULL8 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.34□□□□□ -2.78
SHROOM4Q9ULL8 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.35□□□□□ -2.79
SHROOM4Q9ULL8 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.35□□□□□ -2.79
SHROOM4Q9ULL8 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.35□□□□□ -2.79
SHROOM4Q9ULL8 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.37□□□□□ -2.79
SHROOM4Q9ULL8 RNU7-171P-201ENST00000459581 62 ntBASIC-2.37□□□□□ -2.79
SHROOM4Q9ULL8 AC062037.1-201ENST00000605302 128 ntBASIC-2.37□□□□□ -2.79
SHROOM4Q9ULL8 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.38□□□□□ -2.79
SHROOM4Q9ULL8 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.38□□□□□ -2.79
SHROOM4Q9ULL8 RNU6-663P-201ENST00000391105 106 ntBASIC-2.38□□□□□ -2.79
SHROOM4Q9ULL8 RNU6-406P-201ENST00000516470 107 ntBASIC-2.38□□□□□ -2.79
SHROOM4Q9ULL8 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.39□□□□□ -2.79
SHROOM4Q9ULL8 MIR3938-201ENST00000582157 103 ntBASIC-2.39□□□□□ -2.79
SHROOM4Q9ULL8 RNU6-737P-201ENST00000365370 107 ntBASIC-2.4□□□□□ -2.79
SHROOM4Q9ULL8 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.4□□□□□ -2.79
SHROOM4Q9ULL8 RNU6-49P-201ENST00000384256 107 ntBASIC-2.41□□□□□ -2.8
SHROOM4Q9ULL8 RNU6-822P-201ENST00000362707 106 ntBASIC-2.42□□□□□ -2.8
SHROOM4Q9ULL8 RNU6-940P-201ENST00000363433 104 ntBASIC-2.42□□□□□ -2.8
SHROOM4Q9ULL8 AC139453.2-201ENST00000487255 133 ntBASIC-2.43□□□□□ -2.8
SHROOM4Q9ULL8 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.43□□□□□ -2.8
SHROOM4Q9ULL8 RNU6-44P-201ENST00000384045 107 ntBASIC-2.44□□□□□ -2.8
SHROOM4Q9ULL8 RNU6-634P-201ENST00000459134 106 ntBASIC-2.44□□□□□ -2.8
SHROOM4Q9ULL8 U7.4-201ENST00000614961 63 ntBASIC-2.44□□□□□ -2.8
SHROOM4Q9ULL8 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.45□□□□□ -2.8
SHROOM4Q9ULL8 SNORA25.4-201ENST00000363666 124 ntBASIC-2.46□□□□□ -2.8
SHROOM4Q9ULL8 SNORD114-13-201ENST00000364377 74 ntBASIC-2.46□□□□□ -2.8
SHROOM4Q9ULL8 SNORD30.1-201ENST00000391309 70 ntBASIC-2.46□□□□□ -2.8
SHROOM4Q9ULL8 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.46□□□□□ -2.8
SHROOM4Q9ULL8 MIR548X-201ENST00000580069 75 ntBASIC-2.46□□□□□ -2.8
SHROOM4Q9ULL8 AL359920.1-201ENST00000618332 176 ntBASIC-2.46□□□□□ -2.8
SHROOM4Q9ULL8 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.48□□□□□ -2.81
SHROOM4Q9ULL8 RNU6-787P-201ENST00000384032 107 ntBASIC-2.48□□□□□ -2.81
SHROOM4Q9ULL8 MIR4317-201ENST00000637586 65 ntBASIC-2.48□□□□□ -2.81
SHROOM4Q9ULL8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.49□□□□□ -2.81
SHROOM4Q9ULL8 MIR4666B-201ENST00000578142 81 ntBASIC-2.49□□□□□ -2.81
SHROOM4Q9ULL8 MIR4511-201ENST00000582784 87 ntBASIC-2.49□□□□□ -2.81
SHROOM4Q9ULL8 MIR494-201ENST00000349529 81 ntBASIC-2.5□□□□□ -2.81
SHROOM4Q9ULL8 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.5□□□□□ -2.81
SHROOM4Q9ULL8 SNORD115.2-201ENST00000391126 59 ntBASIC-2.5□□□□□ -2.81
SHROOM4Q9ULL8 RNU6-803P-201ENST00000516034 102 ntBASIC-2.5□□□□□ -2.81
SHROOM4Q9ULL8 RNU6-854P-201ENST00000364036 107 ntBASIC-2.51□□□□□ -2.81
SHROOM4Q9ULL8 RNA5SP224-201ENST00000365069 126 ntBASIC-2.51□□□□□ -2.81
SHROOM4Q9ULL8 MIR656-201ENST00000385224 78 ntBASIC-2.52□□□□□ -2.81
SHROOM4Q9ULL8 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.52□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms