Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.24□□□□□ -2.61
CCDC88CQ9P219 MIR4511-201ENST00000582784 87 ntBASIC-1.24□□□□□ -2.61
CCDC88CQ9P219 SNORA25.4-201ENST00000363666 124 ntBASIC-1.25□□□□□ -2.61
CCDC88CQ9P219 MIR496-201ENST00000385226 102 ntBASIC-1.25□□□□□ -2.61
CCDC88CQ9P219 RNU6-279P-201ENST00000391297 101 ntBASIC-1.25□□□□□ -2.61
CCDC88CQ9P219 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.25□□□□□ -2.61
CCDC88CQ9P219 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.25□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.26□□□□□ -2.61
CCDC88CQ9P219 RNU6-530P-201ENST00000391180 107 ntBASIC-1.26□□□□□ -2.61
CCDC88CQ9P219 RNU6-118P-201ENST00000516552 102 ntBASIC-1.26□□□□□ -2.61
CCDC88CQ9P219 RNU6-789P-201ENST00000517105 102 ntBASIC-1.26□□□□□ -2.61
CCDC88CQ9P219 SNORD113-3-201ENST00000364830 72 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 AC110620.1-201ENST00000416042 228 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 MIR548X-201ENST00000580069 75 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.27□□□□□ -2.61
CCDC88CQ9P219 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.28□□□□□ -2.61
CCDC88CQ9P219 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.28□□□□□ -2.61
CCDC88CQ9P219 RNU7-119P-201ENST00000459279 63 ntBASIC-1.28□□□□□ -2.61
CCDC88CQ9P219 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.28□□□□□ -2.61
CCDC88CQ9P219 MIR4426-201ENST00000640330 63 ntBASIC-1.28□□□□□ -2.61
CCDC88CQ9P219 RNU6-573P-201ENST00000383938 106 ntBASIC-1.28□□□□□ -2.62
CCDC88CQ9P219 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.28□□□□□ -2.62
CCDC88CQ9P219 RNU6-231P-201ENST00000517122 103 ntBASIC-1.28□□□□□ -2.62
CCDC88CQ9P219 MIR4748-201ENST00000578076 82 ntBASIC-1.28□□□□□ -2.62
CCDC88CQ9P219 RNU6-828P-201ENST00000364876 107 ntBASIC-1.29□□□□□ -2.62
CCDC88CQ9P219 RNU6-742P-201ENST00000365289 107 ntBASIC-1.29□□□□□ -2.62
CCDC88CQ9P219 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.29□□□□□ -2.62
CCDC88CQ9P219 FTX_4.1-201ENST00000616291 147 ntBASIC-1.29□□□□□ -2.62
CCDC88CQ9P219 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.3□□□□□ -2.62
CCDC88CQ9P219 RNU6-300P-201ENST00000459080 104 ntBASIC-1.3□□□□□ -2.62
CCDC88CQ9P219 AC097484.2-201ENST00000509147 251 ntBASIC-1.3□□□□□ -2.62
CCDC88CQ9P219 MIR3139-201ENST00000579145 76 ntBASIC-1.3□□□□□ -2.62
CCDC88CQ9P219 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.31□□□□□ -2.62
CCDC88CQ9P219 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.31□□□□□ -2.62
CCDC88CQ9P219 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.31□□□□□ -2.62
CCDC88CQ9P219 RNU6-857P-201ENST00000515893 110 ntBASIC-1.31□□□□□ -2.62
CCDC88CQ9P219 RNU6-419P-201ENST00000517030 63 ntBASIC-1.31□□□□□ -2.62
CCDC88CQ9P219 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 RNU6-194P-201ENST00000363862 105 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 RNU6-590P-201ENST00000365039 107 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 SNORD30.1-201ENST00000391309 70 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 RNU6-176P-201ENST00000517196 105 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 U2.22-201ENST00000636441 106 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 RNU6-471P-201ENST00000383944 106 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 MIR466-201ENST00000580653 84 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.32□□□□□ -2.62
CCDC88CQ9P219 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.33□□□□□ -2.62
CCDC88CQ9P219 RNY4P9-201ENST00000363194 97 ntBASIC-1.33□□□□□ -2.62
CCDC88CQ9P219 MIR3202-2-201ENST00000635980 79 ntBASIC-1.33□□□□□ -2.62
CCDC88CQ9P219 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.33□□□□□ -2.62
CCDC88CQ9P219 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.33□□□□□ -2.62
CCDC88CQ9P219 SNORA26.2-201ENST00000390922 122 ntBASIC-1.33□□□□□ -2.62
CCDC88CQ9P219 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.34□□□□□ -2.62
CCDC88CQ9P219 RNU6-539P-201ENST00000516665 103 ntBASIC-1.34□□□□□ -2.62
CCDC88CQ9P219 AL603908.1-201ENST00000406098 201 ntBASIC-1.35□□□□□ -2.63
CCDC88CQ9P219 SNORD73B-201ENST00000364394 72 ntBASIC-1.35□□□□□ -2.63
CCDC88CQ9P219 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.35□□□□□ -2.63
CCDC88CQ9P219 RNU6-242P-201ENST00000384359 107 ntBASIC-1.36□□□□□ -2.63
CCDC88CQ9P219 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.36□□□□□ -2.63
CCDC88CQ9P219 RNY4P29-201ENST00000410801 97 ntBASIC-1.36□□□□□ -2.63
CCDC88CQ9P219 SNORD54-201ENST00000459159 67 ntBASIC-1.36□□□□□ -2.63
CCDC88CQ9P219 AL451105.1-201ENST00000450005 189 ntBASIC-1.37□□□□□ -2.63
CCDC88CQ9P219 MIR4679-1-201ENST00000637619 75 ntBASIC-1.37□□□□□ -2.63
CCDC88CQ9P219 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.37□□□□□ -2.63
CCDC88CQ9P219 AC103706.3-201ENST00000636297 85 ntBASIC-1.37□□□□□ -2.63
CCDC88CQ9P219 MIR4317-201ENST00000637586 65 ntBASIC-1.37□□□□□ -2.63
CCDC88CQ9P219 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.38□□□□□ -2.63
CCDC88CQ9P219 MIR548H4-201ENST00000408689 111 ntBASIC-1.38□□□□□ -2.63
CCDC88CQ9P219 RNU6-345P-201ENST00000517001 107 ntBASIC-1.39□□□□□ -2.63
CCDC88CQ9P219 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
CCDC88CQ9P219 RNU6-871P-201ENST00000516122 100 ntBASIC-1.4□□□□□ -2.63
CCDC88CQ9P219 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.4□□□□□ -2.63
CCDC88CQ9P219 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.4□□□□□ -2.63
CCDC88CQ9P219 SNORD78.1-201ENST00000390866 65 ntBASIC-1.4□□□□□ -2.63
CCDC88CQ9P219 RNU4-33P-201ENST00000364316 85 ntBASIC-1.41□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.41□□□□□ -2.64
CCDC88CQ9P219 RNA5SP225-201ENST00000410874 135 ntBASIC-1.41□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.42□□□□□ -2.64
CCDC88CQ9P219 RNU6-141P-201ENST00000410499 105 ntBASIC-1.42□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.42□□□□□ -2.64
CCDC88CQ9P219 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.42□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.42□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.43□□□□□ -2.64
CCDC88CQ9P219 MIR548AL-201ENST00000578416 97 ntBASIC-1.43□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.44□□□□□ -2.64
CCDC88CQ9P219 RNU6-122P-201ENST00000516818 107 ntBASIC-1.44□□□□□ -2.64
CCDC88CQ9P219 RNU6-776P-201ENST00000364403 104 ntBASIC-1.44□□□□□ -2.64
CCDC88CQ9P219 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.44□□□□□ -2.64
CCDC88CQ9P219 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.44□□□□□ -2.64
CCDC88CQ9P219 MIR4662A-201ENST00000637499 67 ntBASIC-1.44□□□□□ -2.64
CCDC88CQ9P219 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.45□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.45□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.45□□□□□ -2.64
CCDC88CQ9P219 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms