Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC013734.1-201ENST00000619329 111 ntBASIC-1.67□□□□□ -2.68
SNRNP40Q96DI7 U6.97-201ENST00000636904 101 ntBASIC-1.67□□□□□ -2.68
SNRNP40Q96DI7 AC103706.3-201ENST00000636297 85 ntBASIC-1.68□□□□□ -2.68
SNRNP40Q96DI7 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.69□□□□□ -2.68
SNRNP40Q96DI7 MIR548W-201ENST00000581970 74 ntBASIC-1.69□□□□□ -2.68
SNRNP40Q96DI7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
SNRNP40Q96DI7 RNU6-828P-201ENST00000364876 107 ntBASIC-1.7□□□□□ -2.68
SNRNP40Q96DI7 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.7□□□□□ -2.68
SNRNP40Q96DI7 RNA5SP405-201ENST00000363059 114 ntBASIC-1.71□□□□□ -2.68
SNRNP40Q96DI7 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.71□□□□□ -2.68
SNRNP40Q96DI7 SNORA40B-201ENST00000385573 128 ntBASIC-1.72□□□□□ -2.68
SNRNP40Q96DI7 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.73□□□□□ -2.69
SNRNP40Q96DI7 MIR4679-1-201ENST00000637619 75 ntBASIC-1.73□□□□□ -2.69
SNRNP40Q96DI7 RNU6-940P-201ENST00000363433 104 ntBASIC-1.74□□□□□ -2.69
SNRNP40Q96DI7 RNU6-520P-201ENST00000384717 104 ntBASIC-1.74□□□□□ -2.69
SNRNP40Q96DI7 snoU13.10-201ENST00000459301 103 ntBASIC-1.74□□□□□ -2.69
SNRNP40Q96DI7 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.74□□□□□ -2.69
SNRNP40Q96DI7 MIR3139-201ENST00000579145 76 ntBASIC-1.74□□□□□ -2.69
SNRNP40Q96DI7 RNU7-119P-201ENST00000459279 63 ntBASIC-1.75□□□□□ -2.69
SNRNP40Q96DI7 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.75□□□□□ -2.69
SNRNP40Q96DI7 RNU6-118P-201ENST00000516552 102 ntBASIC-1.75□□□□□ -2.69
SNRNP40Q96DI7 SNORA40.16-201ENST00000517238 121 ntBASIC-1.76□□□□□ -2.69
SNRNP40Q96DI7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.76□□□□□ -2.69
SNRNP40Q96DI7 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.76□□□□□ -2.69
SNRNP40Q96DI7 RNU6-194P-201ENST00000363862 105 ntBASIC-1.77□□□□□ -2.69
SNRNP40Q96DI7 RNU6-800P-201ENST00000384473 103 ntBASIC-1.77□□□□□ -2.69
SNRNP40Q96DI7 MIR4662A-201ENST00000637499 67 ntBASIC-1.77□□□□□ -2.69
SNRNP40Q96DI7 RNU6-776P-201ENST00000364403 104 ntBASIC-1.78□□□□□ -2.69
SNRNP40Q96DI7 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.78□□□□□ -2.69
SNRNP40Q96DI7 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.79□□□□□ -2.7
SNRNP40Q96DI7 MIR466-201ENST00000580653 84 ntBASIC-1.79□□□□□ -2.7
SNRNP40Q96DI7 MIR202-201ENST00000362219 110 ntBASIC-1.8□□□□□ -2.7
SNRNP40Q96DI7 MIR581-201ENST00000384895 96 ntBASIC-1.8□□□□□ -2.7
SNRNP40Q96DI7 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.81□□□□□ -2.7
SNRNP40Q96DI7 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.82□□□□□ -2.7
SNRNP40Q96DI7 MIR4748-201ENST00000578076 82 ntBASIC-1.82□□□□□ -2.7
SNRNP40Q96DI7 MIR3938-201ENST00000582157 103 ntBASIC-1.82□□□□□ -2.7
SNRNP40Q96DI7 MT-TM-201ENST00000387377 68 ntBASIC-1.83□□□□□ -2.7
SNRNP40Q96DI7 RNU6-530P-201ENST00000391180 107 ntBASIC-1.84□□□□□ -2.7
SNRNP40Q96DI7 AC110620.1-201ENST00000416042 228 ntBASIC-1.84□□□□□ -2.7
SNRNP40Q96DI7 SNORD18C-201ENST00000362704 69 ntBASIC-1.86□□□□□ -2.71
SNRNP40Q96DI7 SNORD60-201ENST00000383903 83 ntBASIC-1.86□□□□□ -2.71
SNRNP40Q96DI7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
SNRNP40Q96DI7 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.86□□□□□ -2.71
SNRNP40Q96DI7 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.87□□□□□ -2.71
SNRNP40Q96DI7 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.87□□□□□ -2.71
SNRNP40Q96DI7 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.88□□□□□ -2.71
SNRNP40Q96DI7 RNU6-361P-201ENST00000364454 107 ntBASIC-1.89□□□□□ -2.71
SNRNP40Q96DI7 MIR496-201ENST00000385226 102 ntBASIC-1.89□□□□□ -2.71
SNRNP40Q96DI7 AL451105.1-201ENST00000450005 189 ntBASIC-1.89□□□□□ -2.71
SNRNP40Q96DI7 SNORD45.2-201ENST00000363552 72 ntBASIC-1.9□□□□□ -2.71
SNRNP40Q96DI7 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.9□□□□□ -2.71
SNRNP40Q96DI7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
SNRNP40Q96DI7 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.9□□□□□ -2.71
SNRNP40Q96DI7 SNORA17.4-201ENST00000391287 132 ntBASIC-1.9□□□□□ -2.71
SNRNP40Q96DI7 AC097484.2-201ENST00000509147 251 ntBASIC-1.9□□□□□ -2.71
SNRNP40Q96DI7 FTX_4.1-201ENST00000616291 147 ntBASIC-1.9□□□□□ -2.71
SNRNP40Q96DI7 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.91□□□□□ -2.72
SNRNP40Q96DI7 RNU6-471P-201ENST00000383944 106 ntBASIC-1.91□□□□□ -2.72
SNRNP40Q96DI7 MIR548N-201ENST00000408742 75 ntBASIC-1.91□□□□□ -2.72
SNRNP40Q96DI7 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.92□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 AC114801.3-201ENST00000510231 177 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.93□□□□□ -2.72
SNRNP40Q96DI7 RNU6-119P-201ENST00000364882 107 ntBASIC-1.94□□□□□ -2.72
SNRNP40Q96DI7 RNU6-419P-201ENST00000517030 63 ntBASIC-1.95□□□□□ -2.72
SNRNP40Q96DI7 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.96□□□□□ -2.72
SNRNP40Q96DI7 SNORD113-3-201ENST00000364830 72 ntBASIC-1.96□□□□□ -2.72
SNRNP40Q96DI7 RNU6-141P-201ENST00000410499 105 ntBASIC-1.96□□□□□ -2.72
SNRNP40Q96DI7 MIR4426-201ENST00000640330 63 ntBASIC-1.96□□□□□ -2.72
SNRNP40Q96DI7 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.97□□□□□ -2.72
SNRNP40Q96DI7 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.98□□□□□ -2.73
SNRNP40Q96DI7 RNU6-68P-201ENST00000516576 104 ntBASIC-1.98□□□□□ -2.73
SNRNP40Q96DI7 RNY4P7-201ENST00000364600 96 ntBASIC-2.02□□□□□ -2.73
SNRNP40Q96DI7 RNY4P9-201ENST00000363194 97 ntBASIC-2.03□□□□□ -2.73
SNRNP40Q96DI7 RNU6-912P-201ENST00000363800 104 ntBASIC-2.03□□□□□ -2.73
SNRNP40Q96DI7 RNU6-300P-201ENST00000459080 104 ntBASIC-2.03□□□□□ -2.73
SNRNP40Q96DI7 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.04□□□□□ -2.74
SNRNP40Q96DI7 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.04□□□□□ -2.74
SNRNP40Q96DI7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.05□□□□□ -2.74
SNRNP40Q96DI7 RNU6-742P-201ENST00000365289 107 ntBASIC-2.06□□□□□ -2.74
SNRNP40Q96DI7 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.06□□□□□ -2.74
SNRNP40Q96DI7 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.07□□□□□ -2.74
SNRNP40Q96DI7 RNU6-176P-201ENST00000517196 105 ntBASIC-2.07□□□□□ -2.74
SNRNP40Q96DI7 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.07□□□□□ -2.74
SNRNP40Q96DI7 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.08□□□□□ -2.74
SNRNP40Q96DI7 RNU6-590P-201ENST00000365039 107 ntBASIC-2.08□□□□□ -2.74
SNRNP40Q96DI7 SNORA72.7-201ENST00000516349 94 ntBASIC-2.08□□□□□ -2.74
SNRNP40Q96DI7 MIR548X-201ENST00000580069 75 ntBASIC-2.08□□□□□ -2.74
SNRNP40Q96DI7 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.08□□□□□ -2.74
SNRNP40Q96DI7 MIR379-201ENST00000362218 67 ntBASIC-2.09□□□□□ -2.74
SNRNP40Q96DI7 RNU6-446P-201ENST00000362827 106 ntBASIC-2.09□□□□□ -2.74
SNRNP40Q96DI7 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.09□□□□□ -2.74
SNRNP40Q96DI7 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.1□□□□□ -2.75
SNRNP40Q96DI7 SNORD54-201ENST00000459159 67 ntBASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 244.9 ms