Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR4426-201ENST00000640330 63 ntBASIC-3.19□□□□□ -2.92
CCDC112Q8NEF3 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.2□□□□□ -2.92
CCDC112Q8NEF3 RNU6-141P-201ENST00000410499 105 ntBASIC-3.2□□□□□ -2.92
CCDC112Q8NEF3 AL451105.1-201ENST00000450005 189 ntBASIC-3.2□□□□□ -2.92
CCDC112Q8NEF3 RNU6-313P-201ENST00000516317 112 ntBASIC-3.2□□□□□ -2.92
CCDC112Q8NEF3 RNU6-147P-201ENST00000383983 107 ntBASIC-3.21□□□□□ -2.92
CCDC112Q8NEF3 RNU6-122P-201ENST00000516818 107 ntBASIC-3.21□□□□□ -2.92
CCDC112Q8NEF3 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.22□□□□□ -2.92
CCDC112Q8NEF3 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.22□□□□□ -2.92
CCDC112Q8NEF3 RNU6-230P-201ENST00000362457 104 ntBASIC-3.23□□□□□ -2.93
CCDC112Q8NEF3 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.23□□□□□ -2.93
CCDC112Q8NEF3 RNU6-590P-201ENST00000365039 107 ntBASIC-3.23□□□□□ -2.93
CCDC112Q8NEF3 RNU6-49P-201ENST00000384256 107 ntBASIC-3.23□□□□□ -2.93
CCDC112Q8NEF3 SNORA25.5-201ENST00000363782 126 ntBASIC-3.24□□□□□ -2.93
CCDC112Q8NEF3 RNU6-300P-201ENST00000459080 104 ntBASIC-3.24□□□□□ -2.93
CCDC112Q8NEF3 RNU6-176P-201ENST00000517196 105 ntBASIC-3.24□□□□□ -2.93
CCDC112Q8NEF3 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.25□□□□□ -2.93
CCDC112Q8NEF3 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.25□□□□□ -2.93
CCDC112Q8NEF3 RNU6-411P-201ENST00000384451 107 ntBASIC-3.25□□□□□ -2.93
CCDC112Q8NEF3 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.25□□□□□ -2.93
CCDC112Q8NEF3 RNU7-119P-201ENST00000459279 63 ntBASIC-3.25□□□□□ -2.93
CCDC112Q8NEF3 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.3□□□□□ -2.94
CCDC112Q8NEF3 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.31□□□□□ -2.94
CCDC112Q8NEF3 RNU6-634P-201ENST00000459134 106 ntBASIC-3.31□□□□□ -2.94
CCDC112Q8NEF3 RNU6-663P-201ENST00000391105 106 ntBASIC-3.32□□□□□ -2.94
CCDC112Q8NEF3 MIR4666B-201ENST00000578142 81 ntBASIC-3.32□□□□□ -2.94
CCDC112Q8NEF3 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.32□□□□□ -2.94
CCDC112Q8NEF3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.34□□□□□ -2.94
CCDC112Q8NEF3 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.35□□□□□ -2.95
CCDC112Q8NEF3 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.35□□□□□ -2.95
CCDC112Q8NEF3 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.35□□□□□ -2.95
CCDC112Q8NEF3 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.35□□□□□ -2.95
CCDC112Q8NEF3 RNU6-242P-201ENST00000384359 107 ntBASIC-3.35□□□□□ -2.95
CCDC112Q8NEF3 RNU6-419P-201ENST00000517030 63 ntBASIC-3.36□□□□□ -2.95
CCDC112Q8NEF3 SNORA25.4-201ENST00000363666 124 ntBASIC-3.37□□□□□ -2.95
CCDC112Q8NEF3 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.37□□□□□ -2.95
CCDC112Q8NEF3 U7.4-201ENST00000614961 63 ntBASIC-3.37□□□□□ -2.95
CCDC112Q8NEF3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.38□□□□□ -2.95
CCDC112Q8NEF3 RNU6-742P-201ENST00000365289 107 ntBASIC-3.39□□□□□ -2.95
CCDC112Q8NEF3 MIR1254-1-201ENST00000408257 97 ntBASIC-3.39□□□□□ -2.95
CCDC112Q8NEF3 MIR494-201ENST00000349529 81 ntBASIC-3.4□□□□□ -2.95
CCDC112Q8NEF3 RNU6-787P-201ENST00000384032 107 ntBASIC-3.41□□□□□ -2.96
CCDC112Q8NEF3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.41□□□□□ -2.96
CCDC112Q8NEF3 RNU6-940P-201ENST00000363433 104 ntBASIC-3.42□□□□□ -2.96
CCDC112Q8NEF3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.42□□□□□ -2.96
CCDC112Q8NEF3 RNU6-215P-201ENST00000365169 102 ntBASIC-3.43□□□□□ -2.96
CCDC112Q8NEF3 MIR548M-201ENST00000408260 86 ntBASIC-3.43□□□□□ -2.96
CCDC112Q8NEF3 RNU6-919P-201ENST00000516731 104 ntBASIC-3.43□□□□□ -2.96
CCDC112Q8NEF3 RNU6-345P-201ENST00000517001 107 ntBASIC-3.43□□□□□ -2.96
CCDC112Q8NEF3 RNA5SP89-201ENST00000410300 108 ntBASIC-3.44□□□□□ -2.96
CCDC112Q8NEF3 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.45□□□□□ -2.96
CCDC112Q8NEF3 MIR450A2-201ENST00000385022 100 ntBASIC-3.45□□□□□ -2.96
CCDC112Q8NEF3 MIR3938-201ENST00000582157 103 ntBASIC-3.45□□□□□ -2.96
CCDC112Q8NEF3 SNORD20-201ENST00000384550 80 ntBASIC-3.46□□□□□ -2.96
CCDC112Q8NEF3 MIR4511-201ENST00000582784 87 ntBASIC-3.46□□□□□ -2.96
CCDC112Q8NEF3 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.47□□□□□ -2.96
CCDC112Q8NEF3 SNORD30.1-201ENST00000391309 70 ntBASIC-3.47□□□□□ -2.96
CCDC112Q8NEF3 MIR3910-1-201ENST00000580936 111 ntBASIC-3.47□□□□□ -2.96
CCDC112Q8NEF3 SNORD113-1-201ENST00000365321 69 ntBASIC-3.48□□□□□ -2.97
CCDC112Q8NEF3 RNY4P30-201ENST00000410216 95 ntBASIC-3.49□□□□□ -2.97
CCDC112Q8NEF3 snosnR66.1-201ENST00000391095 99 ntBASIC-3.5□□□□□ -2.97
CCDC112Q8NEF3 AC103706.3-201ENST00000636297 85 ntBASIC-3.5□□□□□ -2.97
CCDC112Q8NEF3 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.53□□□□□ -2.97
CCDC112Q8NEF3 AL731768.1-201ENST00000603124 139 ntBASIC-3.53□□□□□ -2.97
CCDC112Q8NEF3 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.55□□□□□ -2.98
CCDC112Q8NEF3 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.56□□□□□ -2.98
CCDC112Q8NEF3 MIR3668-201ENST00000582138 75 ntBASIC-3.56□□□□□ -2.98
CCDC112Q8NEF3 U6.111-201ENST00000636093 83 ntBASIC-3.56□□□□□ -2.98
CCDC112Q8NEF3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.56□□□□□ -2.98
CCDC112Q8NEF3 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.58□□□□□ -2.98
CCDC112Q8NEF3 RNU6-44P-201ENST00000384045 107 ntBASIC-3.58□□□□□ -2.98
CCDC112Q8NEF3 RNU6-871P-201ENST00000516122 100 ntBASIC-3.58□□□□□ -2.98
CCDC112Q8NEF3 RNU6-294P-201ENST00000364999 102 ntBASIC-3.59□□□□□ -2.98
CCDC112Q8NEF3 MT-TR-201ENST00000387439 65 ntBASIC-3.59□□□□□ -2.98
CCDC112Q8NEF3 RNU6-803P-201ENST00000516034 102 ntBASIC-3.59□□□□□ -2.98
CCDC112Q8NEF3 RNU6-822P-201ENST00000362707 106 ntBASIC-3.6□□□□□ -2.99
CCDC112Q8NEF3 RNU6-820P-201ENST00000384273 107 ntBASIC-3.6□□□□□ -2.99
CCDC112Q8NEF3 RNU6-539P-201ENST00000516665 103 ntBASIC-3.6□□□□□ -2.99
CCDC112Q8NEF3 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.62□□□□□ -2.99
CCDC112Q8NEF3 MIR548X-201ENST00000580069 75 ntBASIC-3.62□□□□□ -2.99
CCDC112Q8NEF3 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.64□□□□□ -2.99
CCDC112Q8NEF3 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.64□□□□□ -2.99
CCDC112Q8NEF3 RNU6-153P-201ENST00000364422 104 ntBASIC-3.65□□□□□ -2.99
CCDC112Q8NEF3 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.65□□□□□ -2.99
CCDC112Q8NEF3 RNU6-800P-201ENST00000384473 103 ntBASIC-3.65□□□□□ -2.99
CCDC112Q8NEF3 AL606753.1-201ENST00000427435 87 ntBASIC-3.65□□□□□ -2.99
CCDC112Q8NEF3 MIR3671-201ENST00000580455 88 ntBASIC-3.65□□□□□ -2.99
CCDC112Q8NEF3 RNY4P25-201ENST00000459254 96 ntBASIC-3.66□□□□□ -3
CCDC112Q8NEF3 MIR5693-201ENST00000577722 73 ntBASIC-3.66□□□□□ -3
CCDC112Q8NEF3 MIR4679-1-201ENST00000637619 75 ntBASIC-3.66□□□□□ -3
CCDC112Q8NEF3 AC110620.1-201ENST00000416042 228 ntBASIC-3.67□□□□□ -3
CCDC112Q8NEF3 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.67□□□□□ -3
CCDC112Q8NEF3 AC062037.1-201ENST00000605302 128 ntBASIC-3.67□□□□□ -3
CCDC112Q8NEF3 RNU6-406P-201ENST00000516470 107 ntBASIC-3.68□□□□□ -3
CCDC112Q8NEF3 AC139453.2-201ENST00000487255 133 ntBASIC-3.7□□□□□ -3
CCDC112Q8NEF3 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.7□□□□□ -3
CCDC112Q8NEF3 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.72□□□□□ -3
CCDC112Q8NEF3 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.73□□□□□ -3.01
CCDC112Q8NEF3 MIR4317-201ENST00000637586 65 ntBASIC-3.74□□□□□ -3.01
CCDC112Q8NEF3 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.76□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms