Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.98□□□□□ -2.89
CCDC89Q8N998 MIR4511-201ENST00000582784 87 ntBASIC-2.98□□□□□ -2.89
CCDC89Q8N998 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.98□□□□□ -2.89
CCDC89Q8N998 Y_RNA.284-201ENST00000364806 102 ntBASIC-3□□□□□ -2.89
CCDC89Q8N998 RNY4P27-201ENST00000363341 96 ntBASIC-3.02□□□□□ -2.89
CCDC89Q8N998 AL451105.1-201ENST00000450005 189 ntBASIC-3.02□□□□□ -2.89
CCDC89Q8N998 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.02□□□□□ -2.89
CCDC89Q8N998 RNU6-940P-201ENST00000363433 104 ntBASIC-3.03□□□□□ -2.89
CCDC89Q8N998 RNA5SP170-201ENST00000517150 101 ntBASIC-3.03□□□□□ -2.89
CCDC89Q8N998 AC103706.3-201ENST00000636297 85 ntBASIC-3.03□□□□□ -2.89
CCDC89Q8N998 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.04□□□□□ -2.9
CCDC89Q8N998 RNU6-279P-201ENST00000391297 101 ntBASIC-3.04□□□□□ -2.9
CCDC89Q8N998 RNY4P29-201ENST00000410801 97 ntBASIC-3.04□□□□□ -2.9
CCDC89Q8N998 SNORD45.2-201ENST00000363552 72 ntBASIC-3.05□□□□□ -2.9
CCDC89Q8N998 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.05□□□□□ -2.9
CCDC89Q8N998 RNU6-539P-201ENST00000516665 103 ntBASIC-3.05□□□□□ -2.9
CCDC89Q8N998 MIR4426-201ENST00000640330 63 ntBASIC-3.05□□□□□ -2.9
CCDC89Q8N998 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.06□□□□□ -2.9
CCDC89Q8N998 SNORA26.2-201ENST00000390922 122 ntBASIC-3.06□□□□□ -2.9
CCDC89Q8N998 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.06□□□□□ -2.9
CCDC89Q8N998 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-3.06□□□□□ -2.9
CCDC89Q8N998 MIR466-201ENST00000580653 84 ntBASIC-3.07□□□□□ -2.9
CCDC89Q8N998 MIR3938-201ENST00000582157 103 ntBASIC-3.07□□□□□ -2.9
CCDC89Q8N998 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.09□□□□□ -2.9
CCDC89Q8N998 MIR4723-201ENST00000585070 81 ntBASIC-3.09□□□□□ -2.9
CCDC89Q8N998 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.1□□□□□ -2.91
CCDC89Q8N998 MIR1207-201ENST00000408249 87 ntBASIC-3.11□□□□□ -2.91
CCDC89Q8N998 RNU6-800P-201ENST00000384473 103 ntBASIC-3.13□□□□□ -2.91
CCDC89Q8N998 RNA5SP225-201ENST00000410874 135 ntBASIC-3.13□□□□□ -2.91
CCDC89Q8N998 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.14□□□□□ -2.91
CCDC89Q8N998 RNU6-300P-201ENST00000459080 104 ntBASIC-3.15□□□□□ -2.91
CCDC89Q8N998 AC097484.2-201ENST00000509147 251 ntBASIC-3.15□□□□□ -2.91
CCDC89Q8N998 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.16□□□□□ -2.92
CCDC89Q8N998 RNU6-419P-201ENST00000517030 63 ntBASIC-3.16□□□□□ -2.92
CCDC89Q8N998 MIR4679-1-201ENST00000637619 75 ntBASIC-3.16□□□□□ -2.92
CCDC89Q8N998 RNU6-118P-201ENST00000516552 102 ntBASIC-3.17□□□□□ -2.92
CCDC89Q8N998 RNA5SP405-201ENST00000363059 114 ntBASIC-3.18□□□□□ -2.92
CCDC89Q8N998 RNU6-194P-201ENST00000363862 105 ntBASIC-3.18□□□□□ -2.92
CCDC89Q8N998 SNORD78.1-201ENST00000390866 65 ntBASIC-3.18□□□□□ -2.92
CCDC89Q8N998 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.18□□□□□ -2.92
CCDC89Q8N998 RNU6-590P-201ENST00000365039 107 ntBASIC-3.19□□□□□ -2.92
CCDC89Q8N998 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.19□□□□□ -2.92
CCDC89Q8N998 RNU6-68P-201ENST00000516576 104 ntBASIC-3.19□□□□□ -2.92
CCDC89Q8N998 RNU6-912P-201ENST00000363800 104 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.2□□□□□ -2.92
CCDC89Q8N998 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.21□□□□□ -2.92
CCDC89Q8N998 AC110620.1-201ENST00000416042 228 ntBASIC-3.21□□□□□ -2.92
CCDC89Q8N998 MIR379-201ENST00000362218 67 ntBASIC-3.22□□□□□ -2.92
CCDC89Q8N998 RNU6-742P-201ENST00000365289 107 ntBASIC-3.23□□□□□ -2.93
CCDC89Q8N998 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.23□□□□□ -2.93
CCDC89Q8N998 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.24□□□□□ -2.93
CCDC89Q8N998 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.24□□□□□ -2.93
CCDC89Q8N998 FTX_4.1-201ENST00000616291 147 ntBASIC-3.24□□□□□ -2.93
CCDC89Q8N998 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.25□□□□□ -2.93
CCDC89Q8N998 RNU6-176P-201ENST00000517196 105 ntBASIC-3.25□□□□□ -2.93
CCDC89Q8N998 SNORD113-3-201ENST00000364830 72 ntBASIC-3.26□□□□□ -2.93
CCDC89Q8N998 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.27□□□□□ -2.93
CCDC89Q8N998 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.27□□□□□ -2.93
CCDC89Q8N998 RNU6-776P-201ENST00000364403 104 ntBASIC-3.29□□□□□ -2.94
CCDC89Q8N998 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.29□□□□□ -2.94
CCDC89Q8N998 MIR4748-201ENST00000578076 82 ntBASIC-3.29□□□□□ -2.94
CCDC89Q8N998 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.3□□□□□ -2.94
CCDC89Q8N998 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.32□□□□□ -2.94
CCDC89Q8N998 MIR4662A-201ENST00000637499 67 ntBASIC-3.32□□□□□ -2.94
CCDC89Q8N998 RNU6-119P-201ENST00000364882 107 ntBASIC-3.33□□□□□ -2.94
CCDC89Q8N998 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.33□□□□□ -2.94
CCDC89Q8N998 MIR3139-201ENST00000579145 76 ntBASIC-3.33□□□□□ -2.94
CCDC89Q8N998 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.36□□□□□ -2.95
CCDC89Q8N998 MIR496-201ENST00000385226 102 ntBASIC-3.36□□□□□ -2.95
CCDC89Q8N998 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.37□□□□□ -2.95
CCDC89Q8N998 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.37□□□□□ -2.95
CCDC89Q8N998 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.37□□□□□ -2.95
CCDC89Q8N998 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.38□□□□□ -2.95
CCDC89Q8N998 MIR548X-201ENST00000580069 75 ntBASIC-3.38□□□□□ -2.95
CCDC89Q8N998 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.41□□□□□ -2.96
CCDC89Q8N998 MIR1254-1-201ENST00000408257 97 ntBASIC-3.41□□□□□ -2.96
CCDC89Q8N998 RNU6-471P-201ENST00000383944 106 ntBASIC-3.42□□□□□ -2.96
CCDC89Q8N998 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.42□□□□□ -2.96
CCDC89Q8N998 MT-TM-201ENST00000387377 68 ntBASIC-3.43□□□□□ -2.96
CCDC89Q8N998 MIR1302-4-201ENST00000408701 150 ntBASIC-3.43□□□□□ -2.96
CCDC89Q8N998 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.44□□□□□ -2.96
CCDC89Q8N998 RNU6-446P-201ENST00000362827 106 ntBASIC-3.45□□□□□ -2.96
CCDC89Q8N998 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.46□□□□□ -2.96
CCDC89Q8N998 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.48□□□□□ -2.97
CCDC89Q8N998 RNY4P9-201ENST00000363194 97 ntBASIC-3.49□□□□□ -2.97
CCDC89Q8N998 RNU6-141P-201ENST00000410499 105 ntBASIC-3.49□□□□□ -2.97
CCDC89Q8N998 AC114801.3-201ENST00000510231 177 ntBASIC-3.49□□□□□ -2.97
CCDC89Q8N998 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.53□□□□□ -2.97
CCDC89Q8N998 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.56□□□□□ -2.98
CCDC89Q8N998 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.57□□□□□ -2.98
CCDC89Q8N998 Y_RNA.685-201ENST00000516532 108 ntBASIC-3.57□□□□□ -2.98
CCDC89Q8N998 RNU6-345P-201ENST00000517001 107 ntBASIC-3.57□□□□□ -2.98
CCDC89Q8N998 SNORD113-4-201ENST00000364802 75 ntBASIC-3.59□□□□□ -2.98
CCDC89Q8N998 RNU6-822P-201ENST00000362707 106 ntBASIC-3.6□□□□□ -2.99
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms