Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNY3P8-201ENST00000411366 126 ntBASIC-1.45□□□□□ -2.64
BEST3Q8N1M1 RNU6-638P-201ENST00000516582 104 ntBASIC-1.45□□□□□ -2.64
BEST3Q8N1M1 U6.97-201ENST00000636904 101 ntBASIC-1.45□□□□□ -2.64
BEST3Q8N1M1 AC110620.1-201ENST00000416042 228 ntBASIC-1.46□□□□□ -2.64
BEST3Q8N1M1 snoU13.10-201ENST00000459301 103 ntBASIC-1.46□□□□□ -2.64
BEST3Q8N1M1 RNU6-471P-201ENST00000383944 106 ntBASIC-1.47□□□□□ -2.64
BEST3Q8N1M1 MIR466-201ENST00000580653 84 ntBASIC-1.47□□□□□ -2.64
BEST3Q8N1M1 MIR3938-201ENST00000582157 103 ntBASIC-1.47□□□□□ -2.64
BEST3Q8N1M1 U4.2-201ENST00000618561 85 ntBASIC-1.47□□□□□ -2.64
BEST3Q8N1M1 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 RNU6-828P-201ENST00000364876 107 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 SNORA40B-201ENST00000385573 128 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.48□□□□□ -2.65
BEST3Q8N1M1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.49□□□□□ -2.65
BEST3Q8N1M1 MIR581-201ENST00000384895 96 ntBASIC-1.49□□□□□ -2.65
BEST3Q8N1M1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.49□□□□□ -2.65
BEST3Q8N1M1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.5□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.5□□□□□ -2.65
BEST3Q8N1M1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.5□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.5□□□□□ -2.65
BEST3Q8N1M1 MIR4441-201ENST00000582623 100 ntBASIC-1.5□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.5□□□□□ -2.65
BEST3Q8N1M1 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.51□□□□□ -2.65
BEST3Q8N1M1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.51□□□□□ -2.65
BEST3Q8N1M1 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.53□□□□□ -2.65
BEST3Q8N1M1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.53□□□□□ -2.65
BEST3Q8N1M1 SNORA40.16-201ENST00000517238 121 ntBASIC-1.53□□□□□ -2.65
BEST3Q8N1M1 MIR3139-201ENST00000579145 76 ntBASIC-1.53□□□□□ -2.65
BEST3Q8N1M1 MIR4723-201ENST00000585070 81 ntBASIC-1.53□□□□□ -2.65
BEST3Q8N1M1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.53□□□□□ -2.65
BEST3Q8N1M1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.54□□□□□ -2.66
BEST3Q8N1M1 RNU6-194P-201ENST00000363862 105 ntBASIC-1.55□□□□□ -2.66
BEST3Q8N1M1 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.55□□□□□ -2.66
BEST3Q8N1M1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.56□□□□□ -2.66
BEST3Q8N1M1 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.58□□□□□ -2.66
BEST3Q8N1M1 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.59□□□□□ -2.66
BEST3Q8N1M1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
BEST3Q8N1M1 MT-TM-201ENST00000387377 68 ntBASIC-1.6□□□□□ -2.67
BEST3Q8N1M1 MIR202-201ENST00000362219 110 ntBASIC-1.61□□□□□ -2.67
BEST3Q8N1M1 SNORD45.2-201ENST00000363552 72 ntBASIC-1.62□□□□□ -2.67
BEST3Q8N1M1 MIR1207-201ENST00000408249 87 ntBASIC-1.63□□□□□ -2.67
BEST3Q8N1M1 MIR4748-201ENST00000578076 82 ntBASIC-1.63□□□□□ -2.67
BEST3Q8N1M1 SNORD113-3-201ENST00000364830 72 ntBASIC-1.64□□□□□ -2.67
BEST3Q8N1M1 SNORD18C-201ENST00000362704 69 ntBASIC-1.65□□□□□ -2.67
BEST3Q8N1M1 RNU6-590P-201ENST00000365039 107 ntBASIC-1.65□□□□□ -2.67
BEST3Q8N1M1 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.65□□□□□ -2.67
BEST3Q8N1M1 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.65□□□□□ -2.67
BEST3Q8N1M1 AC097484.2-201ENST00000509147 251 ntBASIC-1.65□□□□□ -2.67
BEST3Q8N1M1 RNU6-68P-201ENST00000516576 104 ntBASIC-1.66□□□□□ -2.68
BEST3Q8N1M1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.66□□□□□ -2.68
BEST3Q8N1M1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.66□□□□□ -2.68
BEST3Q8N1M1 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 MIR548N-201ENST00000408742 75 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.67□□□□□ -2.68
BEST3Q8N1M1 RNU6-141P-201ENST00000410499 105 ntBASIC-1.68□□□□□ -2.68
BEST3Q8N1M1 AL451105.1-201ENST00000450005 189 ntBASIC-1.68□□□□□ -2.68
BEST3Q8N1M1 MIR496-201ENST00000385226 102 ntBASIC-1.69□□□□□ -2.68
BEST3Q8N1M1 RNY4P27-201ENST00000363341 96 ntBASIC-1.7□□□□□ -2.68
BEST3Q8N1M1 RNU6-912P-201ENST00000363800 104 ntBASIC-1.71□□□□□ -2.68
BEST3Q8N1M1 AC125388.1-201ENST00000459631 156 ntBASIC-1.71□□□□□ -2.68
BEST3Q8N1M1 RNU6-419P-201ENST00000517030 63 ntBASIC-1.71□□□□□ -2.68
BEST3Q8N1M1 SNORD60-201ENST00000383903 83 ntBASIC-1.72□□□□□ -2.68
BEST3Q8N1M1 RNU6-530P-201ENST00000391180 107 ntBASIC-1.72□□□□□ -2.68
BEST3Q8N1M1 SNORA17.4-201ENST00000391287 132 ntBASIC-1.73□□□□□ -2.69
BEST3Q8N1M1 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.74□□□□□ -2.69
BEST3Q8N1M1 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.74□□□□□ -2.69
BEST3Q8N1M1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.74□□□□□ -2.69
BEST3Q8N1M1 RNU6-361P-201ENST00000364454 107 ntBASIC-1.75□□□□□ -2.69
BEST3Q8N1M1 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.75□□□□□ -2.69
BEST3Q8N1M1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.75□□□□□ -2.69
BEST3Q8N1M1 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.77□□□□□ -2.69
BEST3Q8N1M1 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.78□□□□□ -2.69
BEST3Q8N1M1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.78□□□□□ -2.69
BEST3Q8N1M1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
BEST3Q8N1M1 MIR1254-1-201ENST00000408257 97 ntBASIC-1.78□□□□□ -2.69
BEST3Q8N1M1 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.79□□□□□ -2.7
BEST3Q8N1M1 MIR4426-201ENST00000640330 63 ntBASIC-1.79□□□□□ -2.7
BEST3Q8N1M1 RNU6-446P-201ENST00000362827 106 ntBASIC-1.8□□□□□ -2.7
BEST3Q8N1M1 RNY4P9-201ENST00000363194 97 ntBASIC-1.8□□□□□ -2.7
BEST3Q8N1M1 MIR548X-201ENST00000580069 75 ntBASIC-1.8□□□□□ -2.7
BEST3Q8N1M1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.8□□□□□ -2.7
BEST3Q8N1M1 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.81□□□□□ -2.7
BEST3Q8N1M1 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.81□□□□□ -2.7
BEST3Q8N1M1 RNU6-742P-201ENST00000365289 107 ntBASIC-1.82□□□□□ -2.7
BEST3Q8N1M1 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.84□□□□□ -2.7
BEST3Q8N1M1 RNU6-119P-201ENST00000364882 107 ntBASIC-1.84□□□□□ -2.7
BEST3Q8N1M1 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.84□□□□□ -2.7
BEST3Q8N1M1 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms