Protein–RNA interactions for Protein: Q8IYE1

CCDC13, Coiled-coil domain-containing protein 13, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13Q8IYE1 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.74□□□□□ -2.69
CCDC13Q8IYE1 MIR3938-201ENST00000582157 103 ntBASIC-1.74□□□□□ -2.69
CCDC13Q8IYE1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.74□□□□□ -2.69
CCDC13Q8IYE1 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.75□□□□□ -2.69
CCDC13Q8IYE1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.76□□□□□ -2.69
CCDC13Q8IYE1 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.76□□□□□ -2.69
CCDC13Q8IYE1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.77□□□□□ -2.69
CCDC13Q8IYE1 MIR466-201ENST00000580653 84 ntBASIC-1.77□□□□□ -2.69
CCDC13Q8IYE1 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.78□□□□□ -2.69
CCDC13Q8IYE1 MIR3123-201ENST00000583417 75 ntBASIC-1.79□□□□□ -2.7
CCDC13Q8IYE1 AC108019.1-201ENST00000512540 175 ntBASIC-1.82□□□□□ -2.7
CCDC13Q8IYE1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.83□□□□□ -2.7
CCDC13Q8IYE1 RNU6-841P-201ENST00000383872 107 ntBASIC-1.83□□□□□ -2.7
CCDC13Q8IYE1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.83□□□□□ -2.7
CCDC13Q8IYE1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.83□□□□□ -2.7
CCDC13Q8IYE1 RNU6-638P-201ENST00000516582 104 ntBASIC-1.83□□□□□ -2.7
CCDC13Q8IYE1 MIR548AM-201ENST00000584298 74 ntBASIC-1.85□□□□□ -2.71
CCDC13Q8IYE1 MIR4756-201ENST00000577874 78 ntBASIC-1.87□□□□□ -2.71
CCDC13Q8IYE1 AC013734.1-201ENST00000619329 111 ntBASIC-1.87□□□□□ -2.71
CCDC13Q8IYE1 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.88□□□□□ -2.71
CCDC13Q8IYE1 RNY3P8-201ENST00000411366 126 ntBASIC-1.88□□□□□ -2.71
CCDC13Q8IYE1 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.88□□□□□ -2.71
CCDC13Q8IYE1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
CCDC13Q8IYE1 AL451105.1-201ENST00000450005 189 ntBASIC-1.9□□□□□ -2.71
CCDC13Q8IYE1 SNORD45.2-201ENST00000363552 72 ntBASIC-1.91□□□□□ -2.72
CCDC13Q8IYE1 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.91□□□□□ -2.72
CCDC13Q8IYE1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.91□□□□□ -2.72
CCDC13Q8IYE1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.91□□□□□ -2.72
CCDC13Q8IYE1 MIR496-201ENST00000385226 102 ntBASIC-1.92□□□□□ -2.72
CCDC13Q8IYE1 MIR664B-201ENST00000626756 61 ntBASIC-1.92□□□□□ -2.72
CCDC13Q8IYE1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.93□□□□□ -2.72
CCDC13Q8IYE1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.93□□□□□ -2.72
CCDC13Q8IYE1 U6.97-201ENST00000636904 101 ntBASIC-1.93□□□□□ -2.72
CCDC13Q8IYE1 RNU6-419P-201ENST00000517030 63 ntBASIC-1.94□□□□□ -2.72
CCDC13Q8IYE1 RNU6-361P-201ENST00000364454 107 ntBASIC-1.95□□□□□ -2.72
CCDC13Q8IYE1 RNU6-119P-201ENST00000364882 107 ntBASIC-1.95□□□□□ -2.72
CCDC13Q8IYE1 RNU4-88P-201ENST00000411220 86 ntBASIC-1.95□□□□□ -2.72
CCDC13Q8IYE1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.96□□□□□ -2.72
CCDC13Q8IYE1 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.98□□□□□ -2.73
CCDC13Q8IYE1 RNU6-590P-201ENST00000365039 107 ntBASIC-1.98□□□□□ -2.73
CCDC13Q8IYE1 SNORD60-201ENST00000383903 83 ntBASIC-1.98□□□□□ -2.73
CCDC13Q8IYE1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.98□□□□□ -2.73
CCDC13Q8IYE1 MIR548W-201ENST00000581970 74 ntBASIC-1.99□□□□□ -2.73
CCDC13Q8IYE1 Y_RNA.284-201ENST00000364806 102 ntBASIC-2□□□□□ -2.73
CCDC13Q8IYE1 MIR548N-201ENST00000408742 75 ntBASIC-2□□□□□ -2.73
CCDC13Q8IYE1 snoU13.10-201ENST00000459301 103 ntBASIC-2□□□□□ -2.73
CCDC13Q8IYE1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2□□□□□ -2.73
CCDC13Q8IYE1 MIR202-201ENST00000362219 110 ntBASIC-2.01□□□□□ -2.73
CCDC13Q8IYE1 RNU6-530P-201ENST00000391180 107 ntBASIC-2.01□□□□□ -2.73
CCDC13Q8IYE1 SNORD18C-201ENST00000362704 69 ntBASIC-2.02□□□□□ -2.73
CCDC13Q8IYE1 SNORA17.4-201ENST00000391287 132 ntBASIC-2.02□□□□□ -2.73
CCDC13Q8IYE1 MIR581-201ENST00000384895 96 ntBASIC-2.03□□□□□ -2.73
CCDC13Q8IYE1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.03□□□□□ -2.73
CCDC13Q8IYE1 RNU6-446P-201ENST00000362827 106 ntBASIC-2.04□□□□□ -2.74
CCDC13Q8IYE1 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.04□□□□□ -2.74
CCDC13Q8IYE1 MIR3139-201ENST00000579145 76 ntBASIC-2.04□□□□□ -2.74
CCDC13Q8IYE1 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.05□□□□□ -2.74
CCDC13Q8IYE1 MIR548X-201ENST00000580069 75 ntBASIC-2.07□□□□□ -2.74
CCDC13Q8IYE1 RNA5SP405-201ENST00000363059 114 ntBASIC-2.08□□□□□ -2.74
CCDC13Q8IYE1 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.08□□□□□ -2.74
CCDC13Q8IYE1 RNY4P7-201ENST00000364600 96 ntBASIC-2.1□□□□□ -2.75
CCDC13Q8IYE1 SNORD54-201ENST00000459159 67 ntBASIC-2.1□□□□□ -2.75
CCDC13Q8IYE1 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.1□□□□□ -2.75
CCDC13Q8IYE1 RNU6-194P-201ENST00000363862 105 ntBASIC-2.11□□□□□ -2.75
CCDC13Q8IYE1 MIR4426-201ENST00000640330 63 ntBASIC-2.11□□□□□ -2.75
CCDC13Q8IYE1 MT-TM-201ENST00000387377 68 ntBASIC-2.12□□□□□ -2.75
CCDC13Q8IYE1 AC125388.1-201ENST00000459631 156 ntBASIC-2.12□□□□□ -2.75
CCDC13Q8IYE1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-2.14□□□□□ -2.75
CCDC13Q8IYE1 AC097484.2-201ENST00000509147 251 ntBASIC-2.14□□□□□ -2.75
CCDC13Q8IYE1 RNU6-176P-201ENST00000517196 105 ntBASIC-2.14□□□□□ -2.75
CCDC13Q8IYE1 MIR4748-201ENST00000578076 82 ntBASIC-2.15□□□□□ -2.75
CCDC13Q8IYE1 FTX_4.1-201ENST00000616291 147 ntBASIC-2.16□□□□□ -2.76
CCDC13Q8IYE1 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.17□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.17□□□□□ -2.76
CCDC13Q8IYE1 RNA5SP93-201ENST00000362525 114 ntBASIC-2.18□□□□□ -2.76
CCDC13Q8IYE1 RNU6-829P-201ENST00000363700 112 ntBASIC-2.18□□□□□ -2.76
CCDC13Q8IYE1 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.18□□□□□ -2.76
CCDC13Q8IYE1 RNU6-300P-201ENST00000459080 104 ntBASIC-2.19□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.19□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.19□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.19□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.19□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.19□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.19□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.2□□□□□ -2.76
CCDC13Q8IYE1 SNORD113-4-201ENST00000364802 75 ntBASIC-2.21□□□□□ -2.76
CCDC13Q8IYE1 MIR633-201ENST00000384821 98 ntBASIC-2.21□□□□□ -2.76
CCDC13Q8IYE1 MIR379-201ENST00000362218 67 ntBASIC-2.22□□□□□ -2.76
CCDC13Q8IYE1 RNU6-742P-201ENST00000365289 107 ntBASIC-2.22□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.22□□□□□ -2.76
CCDC13Q8IYE1 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.23□□□□□ -2.77
CCDC13Q8IYE1 AC139453.2-201ENST00000487255 133 ntBASIC-2.23□□□□□ -2.77
CCDC13Q8IYE1 RNU6-68P-201ENST00000516576 104 ntBASIC-2.23□□□□□ -2.77
CCDC13Q8IYE1 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.24□□□□□ -2.77
CCDC13Q8IYE1 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.25□□□□□ -2.77
CCDC13Q8IYE1 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.25□□□□□ -2.77
CCDC13Q8IYE1 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.26□□□□□ -2.77
CCDC13Q8IYE1 SNORD113-3-201ENST00000364830 72 ntBASIC-2.26□□□□□ -2.77
CCDC13Q8IYE1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.26□□□□□ -2.77
CCDC13Q8IYE1 AC079150.2-201ENST00000443733 78 ntBASIC-2.26□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms