Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-663P-201ENST00000391105 106 ntBASIC-6.59□□□□□ -3.46
LINC00643Q86TS7 RNU6-1326P-201ENST00000391262 107 ntBASIC-6.59□□□□□ -3.46
LINC00643Q86TS7 RNU6-1043P-201ENST00000410355 99 ntBASIC-6.59□□□□□ -3.46
LINC00643Q86TS7 RNU6-907P-201ENST00000390924 102 ntBASIC-6.61□□□□□ -3.47
LINC00643Q86TS7 MIR548F4-201ENST00000408515 105 ntBASIC-6.61□□□□□ -3.47
LINC00643Q86TS7 Y_RNA.138-201ENST00000363462 102 ntBASIC-6.63□□□□□ -3.47
LINC00643Q86TS7 RNY4P13-201ENST00000384284 96 ntBASIC-6.64□□□□□ -3.47
LINC00643Q86TS7 MIR4712-201ENST00000583750 82 ntBASIC-6.64□□□□□ -3.47
LINC00643Q86TS7 RNU6-623P-201ENST00000363143 105 ntBASIC-6.65□□□□□ -3.47
LINC00643Q86TS7 Y_RNA.619-201ENST00000410951 90 ntBASIC-6.65□□□□□ -3.47
LINC00643Q86TS7 MTND5P41-201ENST00000517498 206 ntBASIC-6.66□□□□□ -3.48
LINC00643Q86TS7 AC020661.2-201ENST00000560114 134 ntBASIC-6.66□□□□□ -3.48
LINC00643Q86TS7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-6.66□□□□□ -3.48
LINC00643Q86TS7 RNU4-85P-201ENST00000364675 123 ntBASIC-6.67□□□□□ -3.48
LINC00643Q86TS7 Y_RNA.343-201ENST00000365354 112 ntBASIC-6.68□□□□□ -3.48
LINC00643Q86TS7 Y_RNA.345-201ENST00000365384 92 ntBASIC-6.69□□□□□ -3.48
LINC00643Q86TS7 AC062037.2-201ENST00000610137 73 ntBASIC-6.7□□□□□ -3.48
LINC00643Q86TS7 RNU6-379P-201ENST00000363813 104 ntBASIC-6.71□□□□□ -3.48
LINC00643Q86TS7 Y_RNA.149-201ENST00000363558 117 ntBASIC-6.73□□□□□ -3.49
LINC00643Q86TS7 RNA5SP449-201ENST00000516871 130 ntBASIC-6.73□□□□□ -3.49
LINC00643Q86TS7 RNU6-844P-201ENST00000517175 102 ntBASIC-6.74□□□□□ -3.49
LINC00643Q86TS7 snoMBII-202.2-201ENST00000517263 86 ntBASIC-6.74□□□□□ -3.49
LINC00643Q86TS7 MIR548AL-201ENST00000578416 97 ntBASIC-6.74□□□□□ -3.49
LINC00643Q86TS7 MIR4511-201ENST00000582784 87 ntBASIC-6.74□□□□□ -3.49
LINC00643Q86TS7 MIR4760-201ENST00000585040 80 ntBASIC-6.74□□□□□ -3.49
LINC00643Q86TS7 MIR1245B-201ENST00000636115 69 ntBASIC-6.74□□□□□ -3.49
LINC00643Q86TS7 MT-TD-201ENST00000387419 68 ntBASIC-6.75□□□□□ -3.49
LINC00643Q86TS7 RNU6-634P-201ENST00000459134 106 ntBASIC-6.75□□□□□ -3.49
LINC00643Q86TS7 RNU6-1128P-201ENST00000362825 109 ntBASIC-6.77□□□□□ -3.49
LINC00643Q86TS7 AC103706.3-201ENST00000636297 85 ntBASIC-6.77□□□□□ -3.49
LINC00643Q86TS7 SNORA40.13-201ENST00000516379 120 ntBASIC-6.78□□□□□ -3.49
LINC00643Q86TS7 RNU6-1204P-201ENST00000363948 107 ntBASIC-6.81□□□□□ -3.5
LINC00643Q86TS7 AL117187.1-201ENST00000555482 181 ntBASIC-6.81□□□□□ -3.5
LINC00643Q86TS7 MIR5588-201ENST00000581890 63 ntBASIC-6.81□□□□□ -3.5
LINC00643Q86TS7 RNU6-1008P-201ENST00000384160 104 ntBASIC-6.82□□□□□ -3.5
LINC00643Q86TS7 U6atac.1-201ENST00000616025 117 ntBASIC-6.82□□□□□ -3.5
LINC00643Q86TS7 Y_RNA.73-201ENST00000362910 113 ntBASIC-6.84□□□□□ -3.5
LINC00643Q86TS7 RNU6-959P-201ENST00000384671 107 ntBASIC-6.84□□□□□ -3.5
LINC00643Q86TS7 SNORD116-14-201ENST00000383894 92 ntBASIC-6.86□□□□□ -3.51
LINC00643Q86TS7 SNORD116-17-201ENST00000383929 92 ntBASIC-6.86□□□□□ -3.51
LINC00643Q86TS7 SNORD116-15-201ENST00000384445 92 ntBASIC-6.86□□□□□ -3.51
LINC00643Q86TS7 SNORD116-19-201ENST00000384729 92 ntBASIC-6.86□□□□□ -3.51
LINC00643Q86TS7 SNORD30.1-201ENST00000391309 70 ntBASIC-6.86□□□□□ -3.51
LINC00643Q86TS7 IGLL4P-201ENST00000614590 133 ntBASIC-6.88□□□□□ -3.51
LINC00643Q86TS7 RNU6-808P-201ENST00000391233 108 ntBASIC-6.9□□□□□ -3.51
LINC00643Q86TS7 Y_RNA.94-201ENST00000363068 106 ntBASIC-6.91□□□□□ -3.52
LINC00643Q86TS7 RNU6-200P-201ENST00000364743 107 ntBASIC-6.92□□□□□ -3.52
LINC00643Q86TS7 AL031737.1-201ENST00000450125 223 ntBASIC-6.92□□□□□ -3.52
LINC00643Q86TS7 AL353621.2-201ENST00000605340 133 ntBASIC-6.92□□□□□ -3.52
LINC00643Q86TS7 RNU6-1134P-201ENST00000365156 101 ntBASIC-6.93□□□□□ -3.52
LINC00643Q86TS7 RNU6-1312P-201ENST00000362425 108 ntBASIC-6.95□□□□□ -3.52
LINC00643Q86TS7 RNU7-171P-201ENST00000459581 62 ntBASIC-6.95□□□□□ -3.52
LINC00643Q86TS7 RNU7-200P-201ENST00000516105 62 ntBASIC-6.95□□□□□ -3.52
LINC00643Q86TS7 Y_RNA.165-201ENST00000363721 102 ntBASIC-6.96□□□□□ -3.52
LINC00643Q86TS7 MIR488-201ENST00000365739 83 ntBASIC-6.96□□□□□ -3.52
LINC00643Q86TS7 MIR1302-3-201ENST00000408128 138 ntBASIC-6.96□□□□□ -3.52
LINC00643Q86TS7 Y_RNA.593-201ENST00000410292 98 ntBASIC-6.97□□□□□ -3.53
LINC00643Q86TS7 MTND5P20-201ENST00000448677 143 ntBASIC-6.97□□□□□ -3.53
LINC00643Q86TS7 MIR450A1-201ENST00000362262 91 ntBASIC-6.98□□□□□ -3.53
LINC00643Q86TS7 Y_RNA.406-201ENST00000383984 100 ntBASIC-6.98□□□□□ -3.53
LINC00643Q86TS7 MIR4679-1-201ENST00000637619 75 ntBASIC-6.98□□□□□ -3.53
LINC00643Q86TS7 MIR363-201ENST00000384840 75 ntBASIC-6.99□□□□□ -3.53
LINC00643Q86TS7 Y_RNA.702-201ENST00000516843 96 ntBASIC-7□□□□□ -3.53
LINC00643Q86TS7 Y_RNA.422-201ENST00000384054 114 ntBASIC-7.01□□□□□ -3.53
LINC00643Q86TS7 RNU4-33P-201ENST00000364316 85 ntBASIC-7.02□□□□□ -3.53
LINC00643Q86TS7 U7.4-201ENST00000614961 63 ntBASIC-7.02□□□□□ -3.53
LINC00643Q86TS7 AP000770.2-201ENST00000623694 100 ntBASIC-7.03□□□□□ -3.53
LINC00643Q86TS7 RNU6-589P-201ENST00000516485 107 ntBASIC-7.04□□□□□ -3.54
LINC00643Q86TS7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-7.05□□□□□ -3.54
LINC00643Q86TS7 U6.111-201ENST00000636093 83 ntBASIC-7.05□□□□□ -3.54
LINC00643Q86TS7 RNU6-209P-201ENST00000384118 107 ntBASIC-7.06□□□□□ -3.54
LINC00643Q86TS7 MTCYBP9-201ENST00000431021 303 ntBASIC-7.06□□□□□ -3.54
LINC00643Q86TS7 AC110620.1-201ENST00000416042 228 ntBASIC-7.08□□□□□ -3.54
LINC00643Q86TS7 Y_RNA.545-201ENST00000384652 105 ntBASIC-7.09□□□□□ -3.54
LINC00643Q86TS7 MTCYBP6-201ENST00000441810 138 ntBASIC-7.11□□□□□ -3.55
LINC00643Q86TS7 Y_RNA.489-201ENST00000384410 101 ntBASIC-7.12□□□□□ -3.55
LINC00643Q86TS7 RNU6-539P-201ENST00000516665 103 ntBASIC-7.12□□□□□ -3.55
LINC00643Q86TS7 RNU6-1160P-201ENST00000384546 104 ntBASIC-7.13□□□□□ -3.55
LINC00643Q86TS7 RNU6-871P-201ENST00000516122 100 ntBASIC-7.13□□□□□ -3.55
LINC00643Q86TS7 RNU6-346P-201ENST00000516288 111 ntBASIC-7.14□□□□□ -3.55
LINC00643Q86TS7 MIR568-201ENST00000385036 95 ntBASIC-7.15□□□□□ -3.55
LINC00643Q86TS7 AC114801.3-201ENST00000510231 177 ntBASIC-7.16□□□□□ -3.56
LINC00643Q86TS7 AC008737.2-201ENST00000599446 118 ntBASIC-7.16□□□□□ -3.56
LINC00643Q86TS7 RNU6-627P-201ENST00000364032 102 ntBASIC-7.17□□□□□ -3.56
LINC00643Q86TS7 RNU6-640P-201ENST00000363693 105 ntBASIC-7.2□□□□□ -3.56
LINC00643Q86TS7 RNU6-59P-201ENST00000384787 107 ntBASIC-7.21□□□□□ -3.56
LINC00643Q86TS7 RNU6-446P-201ENST00000362827 106 ntBASIC-7.22□□□□□ -3.57
LINC00643Q86TS7 RNU6-886P-201ENST00000384319 105 ntBASIC-7.22□□□□□ -3.57
LINC00643Q86TS7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-7.22□□□□□ -3.57
LINC00643Q86TS7 AC044792.1-201ENST00000593294 196 ntBASIC-7.22□□□□□ -3.57
LINC00643Q86TS7 Y_RNA.261-201ENST00000364631 102 ntBASIC-7.24□□□□□ -3.57
LINC00643Q86TS7 RNU6-916P-201ENST00000516088 109 ntBASIC-7.24□□□□□ -3.57
LINC00643Q86TS7 Y_RNA.193-201ENST00000363979 102 ntBASIC-7.25□□□□□ -3.57
LINC00643Q86TS7 RNY1P5-201ENST00000383890 115 ntBASIC-7.25□□□□□ -3.57
LINC00643Q86TS7 RNU6-1024P-201ENST00000384199 107 ntBASIC-7.26□□□□□ -3.57
LINC00643Q86TS7 RNU6-242P-201ENST00000384359 107 ntBASIC-7.26□□□□□ -3.57
LINC00643Q86TS7 RNU6-1056P-201ENST00000383996 107 ntBASIC-7.27□□□□□ -3.57
LINC00643Q86TS7 AL117351.2-201ENST00000513571 157 ntBASIC-7.27□□□□□ -3.57
LINC00643Q86TS7 MIR4666B-201ENST00000578142 81 ntBASIC-7.27□□□□□ -3.57
LINC00643Q86TS7 Y_RNA.506-201ENST00000384494 102 ntBASIC-7.28□□□□□ -3.57
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms