Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SCARNA15.1-201ENST00000516384 125 ntBASIC-3.43□□□□□ -2.96
NUP98P52948 RNU6-70P-201ENST00000516438 60 ntBASIC-3.43□□□□□ -2.96
NUP98P52948 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.44□□□□□ -2.96
NUP98P52948 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.44□□□□□ -2.96
NUP98P52948 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-3.44□□□□□ -2.96
NUP98P52948 RNU6-422P-201ENST00000384632 107 ntBASIC-3.44□□□□□ -2.96
NUP98P52948 RNU6-940P-201ENST00000363433 104 ntBASIC-3.45□□□□□ -2.96
NUP98P52948 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.45□□□□□ -2.96
NUP98P52948 RNU6-797P-201ENST00000363101 109 ntBASIC-3.46□□□□□ -2.96
NUP98P52948 MIR363-201ENST00000384840 75 ntBASIC-3.46□□□□□ -2.96
NUP98P52948 SNORD115.2-201ENST00000391126 59 ntBASIC-3.46□□□□□ -2.96
NUP98P52948 RNU7-200P-201ENST00000516105 62 ntBASIC-3.46□□□□□ -2.96
NUP98P52948 RNU6-267P-201ENST00000516714 103 ntBASIC-3.46□□□□□ -2.96
NUP98P52948 MIR4503-201ENST00000582187 83 ntBASIC-3.46□□□□□ -2.96
NUP98P52948 MIR4484-201ENST00000582855 83 ntBASIC-3.46□□□□□ -2.96
NUP98P52948 MIR548BB-201ENST00000626714 66 ntBASIC-3.47□□□□□ -2.97
NUP98P52948 RNU6-388P-201ENST00000517012 105 ntBASIC-3.48□□□□□ -2.97
NUP98P52948 RNU6-389P-201ENST00000517048 105 ntBASIC-3.48□□□□□ -2.97
NUP98P52948 MIR548X-201ENST00000580069 75 ntBASIC-3.49□□□□□ -2.97
NUP98P52948 RNU6-776P-201ENST00000364403 104 ntBASIC-3.49□□□□□ -2.97
NUP98P52948 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.49□□□□□ -2.97
NUP98P52948 RNU6-895P-201ENST00000384125 103 ntBASIC-3.51□□□□□ -2.97
NUP98P52948 RNU6-327P-201ENST00000516270 127 ntBASIC-3.51□□□□□ -2.97
NUP98P52948 RNU6-219P-201ENST00000364728 107 ntBASIC-3.52□□□□□ -2.97
NUP98P52948 RNU6-497P-201ENST00000365316 104 ntBASIC-3.52□□□□□ -2.97
NUP98P52948 MIR3938-201ENST00000582157 103 ntBASIC-3.52□□□□□ -2.97
NUP98P52948 MIR545-201ENST00000385085 106 ntBASIC-3.53□□□□□ -2.97
NUP98P52948 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.53□□□□□ -2.97
NUP98P52948 MIR548H4-201ENST00000408689 111 ntBASIC-3.55□□□□□ -2.98
NUP98P52948 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.56□□□□□ -2.98
NUP98P52948 RNU4-85P-201ENST00000364675 123 ntBASIC-3.56□□□□□ -2.98
NUP98P52948 RNU6-907P-201ENST00000390924 102 ntBASIC-3.56□□□□□ -2.98
NUP98P52948 SNORA40.13-201ENST00000516379 120 ntBASIC-3.57□□□□□ -2.98
NUP98P52948 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.57□□□□□ -2.98
NUP98P52948 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.58□□□□□ -2.98
NUP98P52948 RNU6-1045P-201ENST00000516321 107 ntBASIC-3.58□□□□□ -2.98
NUP98P52948 AL117351.2-201ENST00000513571 157 ntBASIC-3.59□□□□□ -2.98
NUP98P52948 RNU6-886P-201ENST00000384319 105 ntBASIC-3.6□□□□□ -2.99
NUP98P52948 MT-TG-201ENST00000387429 68 ntBASIC-3.6□□□□□ -2.99
NUP98P52948 SNORD116-14-201ENST00000383894 92 ntBASIC-3.61□□□□□ -2.99
NUP98P52948 SNORD116-17-201ENST00000383929 92 ntBASIC-3.61□□□□□ -2.99
NUP98P52948 SNORD116-15-201ENST00000384445 92 ntBASIC-3.61□□□□□ -2.99
NUP98P52948 RNU6-411P-201ENST00000384451 107 ntBASIC-3.61□□□□□ -2.99
NUP98P52948 SNORD116-19-201ENST00000384729 92 ntBASIC-3.61□□□□□ -2.99
NUP98P52948 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.61□□□□□ -2.99
NUP98P52948 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.61□□□□□ -2.99
NUP98P52948 RNU6-315P-201ENST00000362666 107 ntBASIC-3.62□□□□□ -2.99
NUP98P52948 Y_RNA.506-201ENST00000384494 102 ntBASIC-3.63□□□□□ -2.99
NUP98P52948 RNU6-1043P-201ENST00000410355 99 ntBASIC-3.63□□□□□ -2.99
NUP98P52948 RNY1P5-201ENST00000383890 115 ntBASIC-3.64□□□□□ -2.99
NUP98P52948 RNU6-675P-201ENST00000384236 104 ntBASIC-3.64□□□□□ -2.99
NUP98P52948 RNU6-122P-201ENST00000516818 107 ntBASIC-3.64□□□□□ -2.99
NUP98P52948 MIR548AL-201ENST00000578416 97 ntBASIC-3.66□□□□□ -3
NUP98P52948 RNU6-346P-201ENST00000516288 111 ntBASIC-3.67□□□□□ -3
NUP98P52948 RNA5SP449-201ENST00000516871 130 ntBASIC-3.67□□□□□ -3
NUP98P52948 RNU6-1212P-201ENST00000517023 104 ntBASIC-3.67□□□□□ -3
NUP98P52948 MALAT1.1-201ENST00000618249 95 ntBASIC-3.67□□□□□ -3
NUP98P52948 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.68□□□□□ -3
NUP98P52948 RNU6-255P-201ENST00000516957 105 ntBASIC-3.7□□□□□ -3
NUP98P52948 RNU6-663P-201ENST00000391105 106 ntBASIC-3.71□□□□□ -3
NUP98P52948 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.72□□□□□ -3
NUP98P52948 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.72□□□□□ -3.01
NUP98P52948 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.72□□□□□ -3.01
NUP98P52948 AL031737.1-201ENST00000450125 223 ntBASIC-3.73□□□□□ -3.01
NUP98P52948 RNU6-589P-201ENST00000516485 107 ntBASIC-3.73□□□□□ -3.01
NUP98P52948 RNU6-959P-201ENST00000384671 107 ntBASIC-3.74□□□□□ -3.01
NUP98P52948 RNU6-687P-201ENST00000516443 89 ntBASIC-3.74□□□□□ -3.01
NUP98P52948 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.74□□□□□ -3.01
NUP98P52948 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.75□□□□□ -3.01
NUP98P52948 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.76□□□□□ -3.01
NUP98P52948 RNU6-979P-201ENST00000383896 107 ntBASIC-3.76□□□□□ -3.01
NUP98P52948 RNU6-463P-201ENST00000384340 107 ntBASIC-3.76□□□□□ -3.01
NUP98P52948 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.77□□□□□ -3.01
NUP98P52948 RNU6-808P-201ENST00000391233 108 ntBASIC-3.77□□□□□ -3.01
NUP98P52948 MIR3134-201ENST00000579433 74 ntBASIC-3.78□□□□□ -3.01
NUP98P52948 SNORA25.4-201ENST00000363666 124 ntBASIC-3.79□□□□□ -3.02
NUP98P52948 MIR4511-201ENST00000582784 87 ntBASIC-3.79□□□□□ -3.02
NUP98P52948 AC008267.6-201ENST00000441664 139 ntBASIC-3.79□□□□□ -3.02
NUP98P52948 MIR450A1-201ENST00000362262 91 ntBASIC-3.81□□□□□ -3.02
NUP98P52948 RNU6-1056P-201ENST00000383996 107 ntBASIC-3.81□□□□□ -3.02
NUP98P52948 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.82□□□□□ -3.02
NUP98P52948 RNU4-33P-201ENST00000364316 85 ntBASIC-3.83□□□□□ -3.02
NUP98P52948 MIR1245B-201ENST00000636115 69 ntBASIC-3.83□□□□□ -3.02
NUP98P52948 IGLL4P-201ENST00000614590 133 ntBASIC-3.84□□□□□ -3.02
NUP98P52948 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.85□□□□□ -3.03
NUP98P52948 RNU6-844P-201ENST00000517175 102 ntBASIC-3.86□□□□□ -3.03
NUP98P52948 AC103706.3-201ENST00000636297 85 ntBASIC-3.87□□□□□ -3.03
NUP98P52948 RNU7-171P-201ENST00000459581 62 ntBASIC-3.88□□□□□ -3.03
NUP98P52948 RNU6-634P-201ENST00000459134 106 ntBASIC-3.88□□□□□ -3.03
NUP98P52948 RNU6-916P-201ENST00000516088 109 ntBASIC-3.88□□□□□ -3.03
NUP98P52948 RNU6-1204P-201ENST00000363948 107 ntBASIC-3.9□□□□□ -3.03
NUP98P52948 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.9□□□□□ -3.03
NUP98P52948 U7.4-201ENST00000614961 63 ntBASIC-3.9□□□□□ -3.03
NUP98P52948 Y_RNA.261-201ENST00000364631 102 ntBASIC-3.91□□□□□ -3.03
NUP98P52948 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.91□□□□□ -3.03
NUP98P52948 AC110620.1-201ENST00000416042 228 ntBASIC-3.91□□□□□ -3.03
NUP98P52948 MIR4712-201ENST00000583750 82 ntBASIC-3.93□□□□□ -3.04
NUP98P52948 MIR5588-201ENST00000581890 63 ntBASIC-3.95□□□□□ -3.04
NUP98P52948 MIR4679-1-201ENST00000637619 75 ntBASIC-3.95□□□□□ -3.04
NUP98P52948 SNORD30.1-201ENST00000391309 70 ntBASIC-3.95□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms