Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.37□□□□□ -2.79
COL18A1P39060 RNU7-171P-201ENST00000459581 62 ntBASIC-2.38□□□□□ -2.79
COL18A1P39060 snosnR66.1-201ENST00000391095 99 ntBASIC-2.38□□□□□ -2.79
COL18A1P39060 SNORA17.4-201ENST00000391287 132 ntBASIC-2.38□□□□□ -2.79
COL18A1P39060 MIR548N-201ENST00000408742 75 ntBASIC-2.38□□□□□ -2.79
COL18A1P39060 RNU6-361P-201ENST00000364454 107 ntBASIC-2.39□□□□□ -2.79
COL18A1P39060 RNU6-649P-201ENST00000384463 107 ntBASIC-2.39□□□□□ -2.79
COL18A1P39060 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.4□□□□□ -2.79
COL18A1P39060 SNORD60.1-201ENST00000362451 73 ntBASIC-2.41□□□□□ -2.79
COL18A1P39060 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.41□□□□□ -2.79
COL18A1P39060 RNU6-810P-201ENST00000364001 107 ntBASIC-2.41□□□□□ -2.79
COL18A1P39060 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.41□□□□□ -2.79
COL18A1P39060 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.41□□□□□ -2.8
COL18A1P39060 MIR202-201ENST00000362219 110 ntBASIC-2.42□□□□□ -2.8
COL18A1P39060 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.43□□□□□ -2.8
COL18A1P39060 RNU6-147P-201ENST00000383983 107 ntBASIC-2.43□□□□□ -2.8
COL18A1P39060 MIR581-201ENST00000384895 96 ntBASIC-2.44□□□□□ -2.8
COL18A1P39060 SNORD116.2-201ENST00000391251 93 ntBASIC-2.44□□□□□ -2.8
COL18A1P39060 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.44□□□□□ -2.8
COL18A1P39060 MIR4712-201ENST00000583750 82 ntBASIC-2.44□□□□□ -2.8
COL18A1P39060 MIR379-201ENST00000362218 67 ntBASIC-2.44□□□□□ -2.8
COL18A1P39060 RNU6-687P-201ENST00000516443 89 ntBASIC-2.44□□□□□ -2.8
COL18A1P39060 RNU6-231P-201ENST00000517122 103 ntBASIC-2.45□□□□□ -2.8
COL18A1P39060 MIR3134-201ENST00000579433 74 ntBASIC-2.46□□□□□ -2.8
COL18A1P39060 MIR3668-201ENST00000582138 75 ntBASIC-2.46□□□□□ -2.8
COL18A1P39060 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.47□□□□□ -2.8
COL18A1P39060 RNU6-176P-201ENST00000517196 105 ntBASIC-2.47□□□□□ -2.8
COL18A1P39060 MIR3671-201ENST00000580455 88 ntBASIC-2.47□□□□□ -2.8
COL18A1P39060 RNU6-411P-201ENST00000384451 107 ntBASIC-2.48□□□□□ -2.81
COL18A1P39060 SNORD114-13-201ENST00000364377 74 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 SNORA40B-201ENST00000385573 128 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 RNU6-242P-201ENST00000384359 107 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 RNU7-119P-201ENST00000459279 63 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 U7.4-201ENST00000614961 63 ntBASIC-2.49□□□□□ -2.81
COL18A1P39060 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.5□□□□□ -2.81
COL18A1P39060 SNORA25.5-201ENST00000363782 126 ntBASIC-2.5□□□□□ -2.81
COL18A1P39060 SNORD113-3-201ENST00000364830 72 ntBASIC-2.5□□□□□ -2.81
COL18A1P39060 RNU6-530P-201ENST00000391180 107 ntBASIC-2.5□□□□□ -2.81
COL18A1P39060 RNU6-919P-201ENST00000516731 104 ntBASIC-2.5□□□□□ -2.81
COL18A1P39060 RNU6-49P-201ENST00000384256 107 ntBASIC-2.51□□□□□ -2.81
COL18A1P39060 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.52□□□□□ -2.81
COL18A1P39060 MIR3910-1-201ENST00000580936 111 ntBASIC-2.53□□□□□ -2.81
COL18A1P39060 RNY4P13-201ENST00000384284 96 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 MIR450A2-201ENST00000385022 100 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 MIR4666B-201ENST00000578142 81 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 RNU6-912P-201ENST00000363800 104 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.54□□□□□ -2.82
COL18A1P39060 SNORD20-201ENST00000384550 80 ntBASIC-2.55□□□□□ -2.82
COL18A1P39060 RNU6-663P-201ENST00000391105 106 ntBASIC-2.55□□□□□ -2.82
COL18A1P39060 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.55□□□□□ -2.82
COL18A1P39060 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.55□□□□□ -2.82
COL18A1P39060 RNY4P30-201ENST00000410216 95 ntBASIC-2.56□□□□□ -2.82
COL18A1P39060 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.56□□□□□ -2.82
COL18A1P39060 RNU6-122P-201ENST00000516818 107 ntBASIC-2.56□□□□□ -2.82
COL18A1P39060 AL451105.1-201ENST00000450005 189 ntBASIC-2.57□□□□□ -2.82
COL18A1P39060 RNU6-215P-201ENST00000365169 102 ntBASIC-2.58□□□□□ -2.82
COL18A1P39060 AL731768.1-201ENST00000603124 139 ntBASIC-2.58□□□□□ -2.82
COL18A1P39060 RNU6-940P-201ENST00000363433 104 ntBASIC-2.59□□□□□ -2.82
COL18A1P39060 RNA5SP89-201ENST00000410300 108 ntBASIC-2.59□□□□□ -2.82
COL18A1P39060 RNU6-300P-201ENST00000459080 104 ntBASIC-2.59□□□□□ -2.82
COL18A1P39060 RNU6-634P-201ENST00000459134 106 ntBASIC-2.59□□□□□ -2.82
COL18A1P39060 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.59□□□□□ -2.82
COL18A1P39060 MIR4426-201ENST00000640330 63 ntBASIC-2.59□□□□□ -2.82
COL18A1P39060 AL606753.1-201ENST00000427435 87 ntBASIC-2.6□□□□□ -2.83
COL18A1P39060 RNU6-590P-201ENST00000365039 107 ntBASIC-2.61□□□□□ -2.83
COL18A1P39060 MIR494-201ENST00000349529 81 ntBASIC-2.61□□□□□ -2.83
COL18A1P39060 SNORA25.4-201ENST00000363666 124 ntBASIC-2.61□□□□□ -2.83
COL18A1P39060 SNORD113-1-201ENST00000365321 69 ntBASIC-2.61□□□□□ -2.83
COL18A1P39060 SNORA40.16-201ENST00000517238 121 ntBASIC-2.61□□□□□ -2.83
COL18A1P39060 RNU6-820P-201ENST00000384273 107 ntBASIC-2.63□□□□□ -2.83
COL18A1P39060 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.64□□□□□ -2.83
COL18A1P39060 SNORD30.1-201ENST00000391309 70 ntBASIC-2.65□□□□□ -2.83
COL18A1P39060 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.66□□□□□ -2.83
COL18A1P39060 RNU6-44P-201ENST00000384045 107 ntBASIC-2.66□□□□□ -2.84
COL18A1P39060 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.66□□□□□ -2.84
COL18A1P39060 RNU6-419P-201ENST00000517030 63 ntBASIC-2.66□□□□□ -2.84
COL18A1P39060 MIR3938-201ENST00000582157 103 ntBASIC-2.66□□□□□ -2.84
COL18A1P39060 RNU6-294P-201ENST00000364999 102 ntBASIC-2.68□□□□□ -2.84
COL18A1P39060 RNU6-68P-201ENST00000516576 104 ntBASIC-2.69□□□□□ -2.84
COL18A1P39060 AC103706.3-201ENST00000636297 85 ntBASIC-2.69□□□□□ -2.84
COL18A1P39060 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.69□□□□□ -2.84
COL18A1P39060 MT-TR-201ENST00000387439 65 ntBASIC-2.69□□□□□ -2.84
COL18A1P39060 RNU6-871P-201ENST00000516122 100 ntBASIC-2.69□□□□□ -2.84
COL18A1P39060 RNU6-787P-201ENST00000384032 107 ntBASIC-2.7□□□□□ -2.84
COL18A1P39060 MIR4511-201ENST00000582784 87 ntBASIC-2.7□□□□□ -2.84
COL18A1P39060 MIR4679-1-201ENST00000637619 75 ntBASIC-2.71□□□□□ -2.84
COL18A1P39060 RNU6-800P-201ENST00000384473 103 ntBASIC-2.72□□□□□ -2.84
COL18A1P39060 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.72□□□□□ -2.84
COL18A1P39060 RNU6-345P-201ENST00000517001 107 ntBASIC-2.72□□□□□ -2.85
COL18A1P39060 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.73□□□□□ -2.85
COL18A1P39060 RNU6-665P-201ENST00000384639 107 ntBASIC-2.74□□□□□ -2.85
COL18A1P39060 AL359920.1-201ENST00000618332 176 ntBASIC-2.75□□□□□ -2.85
COL18A1P39060 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.77□□□□□ -2.85
COL18A1P39060 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.77□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 232 ms