Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-4.68□□□□□ -3.16
CLIP1P30622 MIR548F4-201ENST00000408515 105 ntBASIC-4.69□□□□□ -3.16
CLIP1P30622 RNY4P13-201ENST00000384284 96 ntBASIC-4.7□□□□□ -3.16
CLIP1P30622 RNU6-663P-201ENST00000391105 106 ntBASIC-4.7□□□□□ -3.16
CLIP1P30622 AC020661.2-201ENST00000560114 134 ntBASIC-4.7□□□□□ -3.16
CLIP1P30622 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.71□□□□□ -3.16
CLIP1P30622 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.72□□□□□ -3.16
CLIP1P30622 RNA5SP449-201ENST00000516871 130 ntBASIC-4.72□□□□□ -3.16
CLIP1P30622 RNU6-379P-201ENST00000363813 104 ntBASIC-4.72□□□□□ -3.17
CLIP1P30622 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.73□□□□□ -3.17
CLIP1P30622 MIR4712-201ENST00000583750 82 ntBASIC-4.73□□□□□ -3.17
CLIP1P30622 SNORA25.4-201ENST00000363666 124 ntBASIC-4.74□□□□□ -3.17
CLIP1P30622 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.74□□□□□ -3.17
CLIP1P30622 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.76□□□□□ -3.17
CLIP1P30622 MIR4760-201ENST00000585040 80 ntBASIC-4.76□□□□□ -3.17
CLIP1P30622 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.77□□□□□ -3.17
CLIP1P30622 AC062037.2-201ENST00000610137 73 ntBASIC-4.77□□□□□ -3.17
CLIP1P30622 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.77□□□□□ -3.17
CLIP1P30622 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.78□□□□□ -3.17
CLIP1P30622 RNU6-623P-201ENST00000363143 105 ntBASIC-4.8□□□□□ -3.18
CLIP1P30622 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.8□□□□□ -3.18
CLIP1P30622 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.8□□□□□ -3.18
CLIP1P30622 RNU4-85P-201ENST00000364675 123 ntBASIC-4.81□□□□□ -3.18
CLIP1P30622 RNU6-844P-201ENST00000517175 102 ntBASIC-4.81□□□□□ -3.18
CLIP1P30622 MIR1245B-201ENST00000636115 69 ntBASIC-4.81□□□□□ -3.18
CLIP1P30622 MIR548AL-201ENST00000578416 97 ntBASIC-4.82□□□□□ -3.18
CLIP1P30622 MIR4511-201ENST00000582784 87 ntBASIC-4.82□□□□□ -3.18
CLIP1P30622 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.84□□□□□ -3.18
CLIP1P30622 Y_RNA.149-201ENST00000363558 117 ntBASIC-4.84□□□□□ -3.18
CLIP1P30622 RNU6-634P-201ENST00000459134 106 ntBASIC-4.84□□□□□ -3.18
CLIP1P30622 SNORA40.13-201ENST00000516379 120 ntBASIC-4.84□□□□□ -3.18
CLIP1P30622 MIR5588-201ENST00000581890 63 ntBASIC-4.84□□□□□ -3.18
CLIP1P30622 AL117187.1-201ENST00000555482 181 ntBASIC-4.85□□□□□ -3.19
CLIP1P30622 Y_RNA.94-201ENST00000363068 106 ntBASIC-4.88□□□□□ -3.19
CLIP1P30622 MT-TD-201ENST00000387419 68 ntBASIC-4.88□□□□□ -3.19
CLIP1P30622 AC103706.3-201ENST00000636297 85 ntBASIC-4.89□□□□□ -3.19
CLIP1P30622 MIR488-201ENST00000365739 83 ntBASIC-4.89□□□□□ -3.19
CLIP1P30622 SNORD30.1-201ENST00000391309 70 ntBASIC-4.89□□□□□ -3.19
CLIP1P30622 RNU6-1312P-201ENST00000362425 108 ntBASIC-4.9□□□□□ -3.19
CLIP1P30622 IGLL4P-201ENST00000614590 133 ntBASIC-4.9□□□□□ -3.19
CLIP1P30622 U6atac.1-201ENST00000616025 117 ntBASIC-4.9□□□□□ -3.19
CLIP1P30622 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.91□□□□□ -3.2
CLIP1P30622 SNORD116-14-201ENST00000383894 92 ntBASIC-4.91□□□□□ -3.2
CLIP1P30622 SNORD116-17-201ENST00000383929 92 ntBASIC-4.91□□□□□ -3.2
CLIP1P30622 SNORD116-15-201ENST00000384445 92 ntBASIC-4.91□□□□□ -3.2
CLIP1P30622 SNORD116-19-201ENST00000384729 92 ntBASIC-4.91□□□□□ -3.2
CLIP1P30622 MIR450A1-201ENST00000362262 91 ntBASIC-4.92□□□□□ -3.2
CLIP1P30622 RNU6-959P-201ENST00000384671 107 ntBASIC-4.93□□□□□ -3.2
CLIP1P30622 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.93□□□□□ -3.2
CLIP1P30622 RNU6-200P-201ENST00000364743 107 ntBASIC-4.94□□□□□ -3.2
CLIP1P30622 RNU7-200P-201ENST00000516105 62 ntBASIC-4.94□□□□□ -3.2
CLIP1P30622 RNU6-808P-201ENST00000391233 108 ntBASIC-4.95□□□□□ -3.2
CLIP1P30622 AL031737.1-201ENST00000450125 223 ntBASIC-4.95□□□□□ -3.2
CLIP1P30622 RNU6-209P-201ENST00000384118 107 ntBASIC-4.96□□□□□ -3.2
CLIP1P30622 MTND5P20-201ENST00000448677 143 ntBASIC-4.96□□□□□ -3.2
CLIP1P30622 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.97□□□□□ -3.2
CLIP1P30622 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.97□□□□□ -3.2
CLIP1P30622 RNU7-171P-201ENST00000459581 62 ntBASIC-4.97□□□□□ -3.2
CLIP1P30622 AL353621.2-201ENST00000605340 133 ntBASIC-4.97□□□□□ -3.21
CLIP1P30622 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.99□□□□□ -3.21
CLIP1P30622 Y_RNA.702-201ENST00000516843 96 ntBASIC-5□□□□□ -3.21
CLIP1P30622 RNU4-33P-201ENST00000364316 85 ntBASIC-5.01□□□□□ -3.21
CLIP1P30622 MIR568-201ENST00000385036 95 ntBASIC-5.01□□□□□ -3.21
CLIP1P30622 RNU6-346P-201ENST00000516288 111 ntBASIC-5.01□□□□□ -3.21
CLIP1P30622 RNU6-589P-201ENST00000516485 107 ntBASIC-5.01□□□□□ -3.21
CLIP1P30622 AP000770.2-201ENST00000623694 100 ntBASIC-5.01□□□□□ -3.21
CLIP1P30622 MIR363-201ENST00000384840 75 ntBASIC-5.02□□□□□ -3.21
CLIP1P30622 MIR1302-3-201ENST00000408128 138 ntBASIC-5.03□□□□□ -3.21
CLIP1P30622 U7.4-201ENST00000614961 63 ntBASIC-5.03□□□□□ -3.21
CLIP1P30622 AC110620.1-201ENST00000416042 228 ntBASIC-5.04□□□□□ -3.22
CLIP1P30622 MTCYBP9-201ENST00000431021 303 ntBASIC-5.04□□□□□ -3.22
CLIP1P30622 MTCYBP6-201ENST00000441810 138 ntBASIC-5.04□□□□□ -3.22
CLIP1P30622 U6.111-201ENST00000636093 83 ntBASIC-5.04□□□□□ -3.22
CLIP1P30622 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.06□□□□□ -3.22
CLIP1P30622 AC008737.2-201ENST00000599446 118 ntBASIC-5.06□□□□□ -3.22
CLIP1P30622 Y_RNA.422-201ENST00000384054 114 ntBASIC-5.07□□□□□ -3.22
CLIP1P30622 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.07□□□□□ -3.22
CLIP1P30622 RNU6-446P-201ENST00000362827 106 ntBASIC-5.08□□□□□ -3.22
CLIP1P30622 Y_RNA.261-201ENST00000364631 102 ntBASIC-5.08□□□□□ -3.22
CLIP1P30622 RNU6-1160P-201ENST00000384546 104 ntBASIC-5.08□□□□□ -3.22
CLIP1P30622 RNU6-640P-201ENST00000363693 105 ntBASIC-5.09□□□□□ -3.22
CLIP1P30622 MIR4679-1-201ENST00000637619 75 ntBASIC-5.1□□□□□ -3.23
CLIP1P30622 Y_RNA.489-201ENST00000384410 101 ntBASIC-5.13□□□□□ -3.23
CLIP1P30622 RNU6-539P-201ENST00000516665 103 ntBASIC-5.13□□□□□ -3.23
CLIP1P30622 RNU6-886P-201ENST00000384319 105 ntBASIC-5.14□□□□□ -3.23
CLIP1P30622 RNU6-59P-201ENST00000384787 107 ntBASIC-5.14□□□□□ -3.23
CLIP1P30622 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.14□□□□□ -3.23
CLIP1P30622 RNU6-1024P-201ENST00000384199 107 ntBASIC-5.14□□□□□ -3.23
CLIP1P30622 AC114801.3-201ENST00000510231 177 ntBASIC-5.14□□□□□ -3.23
CLIP1P30622 Y_RNA.506-201ENST00000384494 102 ntBASIC-5.15□□□□□ -3.23
CLIP1P30622 RNU6-871P-201ENST00000516122 100 ntBASIC-5.17□□□□□ -3.24
CLIP1P30622 MIR4666B-201ENST00000578142 81 ntBASIC-5.18□□□□□ -3.24
CLIP1P30622 AC044792.1-201ENST00000593294 196 ntBASIC-5.18□□□□□ -3.24
CLIP1P30622 SNORD113-4-201ENST00000364802 75 ntBASIC-5.19□□□□□ -3.24
CLIP1P30622 Y_RNA.535-201ENST00000384612 99 ntBASIC-5.2□□□□□ -3.24
CLIP1P30622 RNU6-627P-201ENST00000364032 102 ntBASIC-5.21□□□□□ -3.24
CLIP1P30622 RNY1P5-201ENST00000383890 115 ntBASIC-5.21□□□□□ -3.24
CLIP1P30622 Y_RNA.193-201ENST00000363979 102 ntBASIC-5.22□□□□□ -3.24
CLIP1P30622 RNU6-1056P-201ENST00000383996 107 ntBASIC-5.22□□□□□ -3.24
CLIP1P30622 AL117351.2-201ENST00000513571 157 ntBASIC-5.22□□□□□ -3.24
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms