Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SNORA40.13-201ENST00000516379 120 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 RNU6-267P-201ENST00000516714 103 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 RNU6-92P-201ENST00000605893 104 ntBASIC-2.36□□□□□ -2.79
COL4A5P29400 RNA5SP224-201ENST00000365069 126 ntBASIC-2.37□□□□□ -2.79
COL4A5P29400 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.37□□□□□ -2.79
COL4A5P29400 MIR4484-201ENST00000582855 83 ntBASIC-2.37□□□□□ -2.79
COL4A5P29400 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.37□□□□□ -2.79
COL4A5P29400 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.37□□□□□ -2.79
COL4A5P29400 SNORD60.1-201ENST00000362451 73 ntBASIC-2.38□□□□□ -2.79
COL4A5P29400 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.39□□□□□ -2.79
COL4A5P29400 SNORD45C-201ENST00000383893 79 ntBASIC-2.39□□□□□ -2.79
COL4A5P29400 RNU6-70P-201ENST00000516438 60 ntBASIC-2.39□□□□□ -2.79
COL4A5P29400 RNU6-419P-201ENST00000517030 63 ntBASIC-2.39□□□□□ -2.79
COL4A5P29400 RNU6-789P-201ENST00000517105 102 ntBASIC-2.39□□□□□ -2.79
COL4A5P29400 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.4□□□□□ -2.79
COL4A5P29400 MIR664A-201ENST00000626086 82 ntBASIC-2.41□□□□□ -2.79
COL4A5P29400 MIR4317-201ENST00000637586 65 ntBASIC-2.41□□□□□ -2.79
COL4A5P29400 RNU6-219P-201ENST00000364728 107 ntBASIC-2.41□□□□□ -2.8
COL4A5P29400 RNY4P13-201ENST00000384284 96 ntBASIC-2.41□□□□□ -2.8
COL4A5P29400 AC139453.2-201ENST00000487255 133 ntBASIC-2.41□□□□□ -2.8
COL4A5P29400 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.41□□□□□ -2.8
COL4A5P29400 RNU6-231P-201ENST00000517122 103 ntBASIC-2.41□□□□□ -2.8
COL4A5P29400 RNU6-895P-201ENST00000384125 103 ntBASIC-2.42□□□□□ -2.8
COL4A5P29400 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.42□□□□□ -2.8
COL4A5P29400 MIR548AI-201ENST00000579940 88 ntBASIC-2.42□□□□□ -2.8
COL4A5P29400 RNU6-959P-201ENST00000384671 107 ntBASIC-2.43□□□□□ -2.8
COL4A5P29400 RNU6-255P-201ENST00000516957 105 ntBASIC-2.44□□□□□ -2.8
COL4A5P29400 SNORA40.16-201ENST00000517238 121 ntBASIC-2.44□□□□□ -2.8
COL4A5P29400 AC008267.6-201ENST00000441664 139 ntBASIC-2.44□□□□□ -2.8
COL4A5P29400 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.44□□□□□ -2.8
COL4A5P29400 MIR548AH-201ENST00000637109 76 ntBASIC-2.44□□□□□ -2.8
COL4A5P29400 RNU6-836P-201ENST00000362920 107 ntBASIC-2.45□□□□□ -2.8
COL4A5P29400 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.45□□□□□ -2.8
COL4A5P29400 RNU6-788P-201ENST00000390967 104 ntBASIC-2.45□□□□□ -2.8
COL4A5P29400 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.45□□□□□ -2.8
COL4A5P29400 AL031737.1-201ENST00000450125 223 ntBASIC-2.45□□□□□ -2.8
COL4A5P29400 RNU6-497P-201ENST00000365316 104 ntBASIC-2.46□□□□□ -2.8
COL4A5P29400 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.46□□□□□ -2.8
COL4A5P29400 SNORD116-24-201ENST00000384549 92 ntBASIC-2.46□□□□□ -2.8
COL4A5P29400 RNU6-315P-201ENST00000362666 107 ntBASIC-2.47□□□□□ -2.81
COL4A5P29400 SNORA25.5-201ENST00000363782 126 ntBASIC-2.48□□□□□ -2.81
COL4A5P29400 SNORD115.2-201ENST00000391126 59 ntBASIC-2.49□□□□□ -2.81
COL4A5P29400 RNU7-119P-201ENST00000459279 63 ntBASIC-2.49□□□□□ -2.81
COL4A5P29400 MALAT1.1-201ENST00000618249 95 ntBASIC-2.49□□□□□ -2.81
COL4A5P29400 RNU6-422P-201ENST00000384632 107 ntBASIC-2.5□□□□□ -2.81
COL4A5P29400 RNU6-589P-201ENST00000516485 107 ntBASIC-2.5□□□□□ -2.81
COL4A5P29400 IGLL4P-201ENST00000614590 133 ntBASIC-2.5□□□□□ -2.81
COL4A5P29400 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.51□□□□□ -2.81
COL4A5P29400 RNU6-675P-201ENST00000384236 104 ntBASIC-2.52□□□□□ -2.81
COL4A5P29400 RNU6-1128P-201ENST00000362825 109 ntBASIC-2.53□□□□□ -2.81
COL4A5P29400 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.53□□□□□ -2.82
COL4A5P29400 MIR545-201ENST00000385085 106 ntBASIC-2.53□□□□□ -2.82
COL4A5P29400 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.54□□□□□ -2.82
COL4A5P29400 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.55□□□□□ -2.82
COL4A5P29400 MIR548X-201ENST00000580069 75 ntBASIC-2.55□□□□□ -2.82
COL4A5P29400 RNU6-776P-201ENST00000364403 104 ntBASIC-2.56□□□□□ -2.82
COL4A5P29400 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.56□□□□□ -2.82
COL4A5P29400 RNU6-940P-201ENST00000363433 104 ntBASIC-2.57□□□□□ -2.82
COL4A5P29400 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.57□□□□□ -2.82
COL4A5P29400 MIR450A1-201ENST00000362262 91 ntBASIC-2.57□□□□□ -2.82
COL4A5P29400 MIR363-201ENST00000384840 75 ntBASIC-2.58□□□□□ -2.82
COL4A5P29400 MIR3938-201ENST00000582157 103 ntBASIC-2.59□□□□□ -2.82
COL4A5P29400 RNU4-85P-201ENST00000364675 123 ntBASIC-2.6□□□□□ -2.82
COL4A5P29400 MIR548H4-201ENST00000408689 111 ntBASIC-2.6□□□□□ -2.82
COL4A5P29400 RNA5SP449-201ENST00000516871 130 ntBASIC-2.6□□□□□ -2.82
COL4A5P29400 MIR1245B-201ENST00000636115 69 ntBASIC-2.6□□□□□ -2.83
COL4A5P29400 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.61□□□□□ -2.83
COL4A5P29400 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.61□□□□□ -2.83
COL4A5P29400 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.62□□□□□ -2.83
COL4A5P29400 RNU6-411P-201ENST00000384451 107 ntBASIC-2.63□□□□□ -2.83
COL4A5P29400 RNU6-979P-201ENST00000383896 107 ntBASIC-2.63□□□□□ -2.83
COL4A5P29400 RNU6-844P-201ENST00000517175 102 ntBASIC-2.63□□□□□ -2.83
COL4A5P29400 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.64□□□□□ -2.83
COL4A5P29400 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.65□□□□□ -2.83
COL4A5P29400 RNU6-81P-201ENST00000365608 104 ntBASIC-2.65□□□□□ -2.83
COL4A5P29400 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.66□□□□□ -2.83
COL4A5P29400 RNU6-22P-201ENST00000384355 107 ntBASIC-2.66□□□□□ -2.83
COL4A5P29400 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.66□□□□□ -2.83
COL4A5P29400 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.66□□□□□ -2.84
COL4A5P29400 RNU7-171P-201ENST00000459581 62 ntBASIC-2.66□□□□□ -2.84
COL4A5P29400 RNU6-687P-201ENST00000516443 89 ntBASIC-2.67□□□□□ -2.84
COL4A5P29400 RNU6-122P-201ENST00000516818 107 ntBASIC-2.67□□□□□ -2.84
COL4A5P29400 RNU6-794P-201ENST00000517261 64 ntBASIC-2.67□□□□□ -2.84
COL4A5P29400 AL365222.1-201ENST00000614661 98 ntBASIC-2.67□□□□□ -2.84
COL4A5P29400 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.68□□□□□ -2.84
COL4A5P29400 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.68□□□□□ -2.84
COL4A5P29400 MIR3133-201ENST00000583157 78 ntBASIC-2.68□□□□□ -2.84
COL4A5P29400 U7.4-201ENST00000614961 63 ntBASIC-2.68□□□□□ -2.84
COL4A5P29400 MIR3134-201ENST00000579433 74 ntBASIC-2.69□□□□□ -2.84
COL4A5P29400 MIR5588-201ENST00000581890 63 ntBASIC-2.69□□□□□ -2.84
COL4A5P29400 RNU6-32P-201ENST00000383948 107 ntBASIC-2.7□□□□□ -2.84
COL4A5P29400 RNU6-13P-201ENST00000384248 107 ntBASIC-2.7□□□□□ -2.84
COL4A5P29400 RNU6-12P-201ENST00000384604 107 ntBASIC-2.7□□□□□ -2.84
COL4A5P29400 RNU6-41P-201ENST00000384741 107 ntBASIC-2.7□□□□□ -2.84
COL4A5P29400 RNU6-663P-201ENST00000391105 106 ntBASIC-2.7□□□□□ -2.84
COL4A5P29400 MIR548AL-201ENST00000578416 97 ntBASIC-2.7□□□□□ -2.84
COL4A5P29400 MIR488-201ENST00000365739 83 ntBASIC-2.72□□□□□ -2.84
COL4A5P29400 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.73□□□□□ -2.85
COL4A5P29400 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.74□□□□□ -2.85
COL4A5P29400 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.74□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms