Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR450A2-201ENST00000385022 100 ntBASIC-2.06□□□□□ -2.74
VIMP08670 RNU6-231P-201ENST00000517122 103 ntBASIC-2.06□□□□□ -2.74
VIMP08670 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.07□□□□□ -2.74
VIMP08670 MIR548N-201ENST00000408742 75 ntBASIC-2.07□□□□□ -2.74
VIMP08670 RNU6-687P-201ENST00000516443 89 ntBASIC-2.07□□□□□ -2.74
VIMP08670 Y_RNA.694-201ENST00000516677 117 ntBASIC-2.07□□□□□ -2.74
VIMP08670 SNORA17.4-201ENST00000391287 132 ntBASIC-2.08□□□□□ -2.74
VIMP08670 AC097484.2-201ENST00000509147 251 ntBASIC-2.08□□□□□ -2.74
VIMP08670 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.08□□□□□ -2.74
VIMP08670 RNU6-294P-201ENST00000364999 102 ntBASIC-2.09□□□□□ -2.74
VIMP08670 SNORD116.2-201ENST00000391251 93 ntBASIC-2.09□□□□□ -2.74
VIMP08670 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.09□□□□□ -2.74
VIMP08670 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.1□□□□□ -2.75
VIMP08670 RNU6-361P-201ENST00000364454 107 ntBASIC-2.1□□□□□ -2.75
VIMP08670 MIR581-201ENST00000384895 96 ntBASIC-2.1□□□□□ -2.75
VIMP08670 SNORD45.2-201ENST00000363552 72 ntBASIC-2.11□□□□□ -2.75
VIMP08670 MIR4666B-201ENST00000578142 81 ntBASIC-2.11□□□□□ -2.75
VIMP08670 RNU6-141P-201ENST00000410499 105 ntBASIC-2.12□□□□□ -2.75
VIMP08670 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.12□□□□□ -2.75
VIMP08670 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.12□□□□□ -2.75
VIMP08670 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.12□□□□□ -2.75
VIMP08670 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.12□□□□□ -2.75
VIMP08670 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.12□□□□□ -2.75
VIMP08670 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.12□□□□□ -2.75
VIMP08670 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.13□□□□□ -2.75
VIMP08670 SNORA40B-201ENST00000385573 128 ntBASIC-2.13□□□□□ -2.75
VIMP08670 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.13□□□□□ -2.75
VIMP08670 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.13□□□□□ -2.75
VIMP08670 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.14□□□□□ -2.75
VIMP08670 RNU6-411P-201ENST00000384451 107 ntBASIC-2.14□□□□□ -2.75
VIMP08670 RNU6-530P-201ENST00000391180 107 ntBASIC-2.14□□□□□ -2.75
VIMP08670 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.14□□□□□ -2.75
VIMP08670 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.14□□□□□ -2.75
VIMP08670 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.15□□□□□ -2.75
VIMP08670 MIR379-201ENST00000362218 67 ntBASIC-2.16□□□□□ -2.76
VIMP08670 RNU7-119P-201ENST00000459279 63 ntBASIC-2.16□□□□□ -2.76
VIMP08670 RNU6-787P-201ENST00000384032 107 ntBASIC-2.17□□□□□ -2.76
VIMP08670 RNU6-122P-201ENST00000516818 107 ntBASIC-2.18□□□□□ -2.76
VIMP08670 SNORA25.5-201ENST00000363782 126 ntBASIC-2.19□□□□□ -2.76
VIMP08670 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.19□□□□□ -2.76
VIMP08670 RNU6-803P-201ENST00000516034 102 ntBASIC-2.19□□□□□ -2.76
VIMP08670 MIR5582-201ENST00000579697 68 ntBASIC-2.19□□□□□ -2.76
VIMP08670 RNU6-663P-201ENST00000391105 106 ntBASIC-2.2□□□□□ -2.76
VIMP08670 AL451105.1-201ENST00000450005 189 ntBASIC-2.2□□□□□ -2.76
VIMP08670 RNU6-176P-201ENST00000517196 105 ntBASIC-2.2□□□□□ -2.76
VIMP08670 MIR4426-201ENST00000640330 63 ntBASIC-2.2□□□□□ -2.76
VIMP08670 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.21□□□□□ -2.76
VIMP08670 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.21□□□□□ -2.76
VIMP08670 RNU6-820P-201ENST00000384273 107 ntBASIC-2.21□□□□□ -2.76
VIMP08670 SNORA40.16-201ENST00000517238 121 ntBASIC-2.21□□□□□ -2.76
VIMP08670 U7.4-201ENST00000614961 63 ntBASIC-2.21□□□□□ -2.76
VIMP08670 Y_RNA.369-201ENST00000365568 117 ntBASIC-2.22□□□□□ -2.76
VIMP08670 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.22□□□□□ -2.76
VIMP08670 RNU6-300P-201ENST00000459080 104 ntBASIC-2.22□□□□□ -2.76
VIMP08670 RNU6-634P-201ENST00000459134 106 ntBASIC-2.22□□□□□ -2.76
VIMP08670 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.22□□□□□ -2.76
VIMP08670 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.22□□□□□ -2.76
VIMP08670 SNORA25.4-201ENST00000363666 124 ntBASIC-2.24□□□□□ -2.77
VIMP08670 RNU6-590P-201ENST00000365039 107 ntBASIC-2.24□□□□□ -2.77
VIMP08670 MIR5693-201ENST00000577722 73 ntBASIC-2.24□□□□□ -2.77
VIMP08670 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.25□□□□□ -2.77
VIMP08670 RNU6-912P-201ENST00000363800 104 ntBASIC-2.25□□□□□ -2.77
VIMP08670 SNORD113-3-201ENST00000364830 72 ntBASIC-2.26□□□□□ -2.77
VIMP08670 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.26□□□□□ -2.77
VIMP08670 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.26□□□□□ -2.77
VIMP08670 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.26□□□□□ -2.77
VIMP08670 AC062037.1-201ENST00000605302 128 ntBASIC-2.27□□□□□ -2.77
VIMP08670 SNORD30.1-201ENST00000391309 70 ntBASIC-2.28□□□□□ -2.77
VIMP08670 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.28□□□□□ -2.77
VIMP08670 RNU6-940P-201ENST00000363433 104 ntBASIC-2.29□□□□□ -2.78
VIMP08670 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.3□□□□□ -2.78
VIMP08670 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.3□□□□□ -2.78
VIMP08670 RNU6-68P-201ENST00000516576 104 ntBASIC-2.3□□□□□ -2.78
VIMP08670 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.31□□□□□ -2.78
VIMP08670 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.31□□□□□ -2.78
VIMP08670 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.32□□□□□ -2.78
VIMP08670 RNU6-871P-201ENST00000516122 100 ntBASIC-2.32□□□□□ -2.78
VIMP08670 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.33□□□□□ -2.78
VIMP08670 RNY4P25-201ENST00000459254 96 ntBASIC-2.33□□□□□ -2.78
VIMP08670 RNU6-419P-201ENST00000517030 63 ntBASIC-2.33□□□□□ -2.78
VIMP08670 AC103706.3-201ENST00000636297 85 ntBASIC-2.33□□□□□ -2.78
VIMP08670 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.34□□□□□ -2.78
VIMP08670 MIR4511-201ENST00000582784 87 ntBASIC-2.34□□□□□ -2.78
VIMP08670 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.35□□□□□ -2.79
VIMP08670 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.35□□□□□ -2.79
VIMP08670 MIR3938-201ENST00000582157 103 ntBASIC-2.35□□□□□ -2.79
VIMP08670 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.35□□□□□ -2.79
VIMP08670 MIR4679-1-201ENST00000637619 75 ntBASIC-2.36□□□□□ -2.79
VIMP08670 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.38□□□□□ -2.79
VIMP08670 MIR509-1-201ENST00000385265 94 ntBASIC-2.39□□□□□ -2.79
VIMP08670 MIR509-2-201ENST00000390724 91 ntBASIC-2.39□□□□□ -2.79
VIMP08670 MIR1254-1-201ENST00000408257 97 ntBASIC-2.39□□□□□ -2.79
VIMP08670 RNU6-539P-201ENST00000516665 103 ntBASIC-2.39□□□□□ -2.79
VIMP08670 RNU6-345P-201ENST00000517001 107 ntBASIC-2.39□□□□□ -2.79
VIMP08670 U6.111-201ENST00000636093 83 ntBASIC-2.39□□□□□ -2.79
VIMP08670 RNU6-742P-201ENST00000365289 107 ntBASIC-2.4□□□□□ -2.79
VIMP08670 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.41□□□□□ -2.8
VIMP08670 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.41□□□□□ -2.8
VIMP08670 AL731768.1-201ENST00000603124 139 ntBASIC-2.41□□□□□ -2.8
VIMP08670 RNU6-822P-201ENST00000362707 106 ntBASIC-2.42□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms