Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU7-107P-201ENST00000459121 61 ntBASIC-3.47□□□□□ -2.96
APOBP04114 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.47□□□□□ -2.97
APOBP04114 AC110620.1-201ENST00000416042 228 ntBASIC-3.48□□□□□ -2.97
APOBP04114 SNORD19B-201ENST00000459623 84 ntBASIC-3.48□□□□□ -2.97
APOBP04114 RNU6-871P-201ENST00000516122 100 ntBASIC-3.48□□□□□ -2.97
APOBP04114 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.48□□□□□ -2.97
APOBP04114 SNORD33.1-201ENST00000516213 88 ntBASIC-3.49□□□□□ -2.97
APOBP04114 SNORA40.13-201ENST00000516379 120 ntBASIC-3.49□□□□□ -2.97
APOBP04114 RNU6-485P-201ENST00000363475 107 ntBASIC-3.49□□□□□ -2.97
APOBP04114 RNU6-394P-201ENST00000410735 107 ntBASIC-3.49□□□□□ -2.97
APOBP04114 MIR4680-201ENST00000580906 66 ntBASIC-3.51□□□□□ -2.97
APOBP04114 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.51□□□□□ -2.97
APOBP04114 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.52□□□□□ -2.97
APOBP04114 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.52□□□□□ -2.97
APOBP04114 SNORA40-201ENST00000388090 126 ntBASIC-3.53□□□□□ -2.97
APOBP04114 RNU6-133P-201ENST00000383989 107 ntBASIC-3.53□□□□□ -2.97
APOBP04114 MIR1302-1-201ENST00000637932 143 ntBASIC-3.53□□□□□ -2.98
APOBP04114 RNU6-426P-201ENST00000516464 97 ntBASIC-3.54□□□□□ -2.98
APOBP04114 RNU6-844P-201ENST00000517175 102 ntBASIC-3.54□□□□□ -2.98
APOBP04114 AC022559.1-201ENST00000520905 205 ntBASIC-3.54□□□□□ -2.98
APOBP04114 RNU7-171P-201ENST00000459581 62 ntBASIC-3.54□□□□□ -2.98
APOBP04114 RNU6-635P-201ENST00000516651 102 ntBASIC-3.54□□□□□ -2.98
APOBP04114 MIR620-201ENST00000385232 95 ntBASIC-3.55□□□□□ -2.98
APOBP04114 AL031737.1-201ENST00000450125 223 ntBASIC-3.55□□□□□ -2.98
APOBP04114 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.56□□□□□ -2.98
APOBP04114 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.56□□□□□ -2.98
APOBP04114 RNU6-446P-201ENST00000362827 106 ntBASIC-3.57□□□□□ -2.98
APOBP04114 SNORD42.2-201ENST00000365570 69 ntBASIC-3.57□□□□□ -2.98
APOBP04114 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.57□□□□□ -2.98
APOBP04114 RNY3P1-201ENST00000365085 102 ntBASIC-3.58□□□□□ -2.98
APOBP04114 MIR4511-201ENST00000582784 87 ntBASIC-3.58□□□□□ -2.98
APOBP04114 U6.103-201ENST00000637085 61 ntBASIC-3.58□□□□□ -2.98
APOBP04114 RNU6-463P-201ENST00000384340 107 ntBASIC-3.59□□□□□ -2.98
APOBP04114 MT-TL1-201ENST00000386347 75 ntBASIC-3.59□□□□□ -2.98
APOBP04114 Y_RNA.343-201ENST00000365354 112 ntBASIC-3.59□□□□□ -2.98
APOBP04114 AC004792.1-201ENST00000614523 137 ntBASIC-3.6□□□□□ -2.99
APOBP04114 RNU6-753P-201ENST00000363926 107 ntBASIC-3.6□□□□□ -2.99
APOBP04114 RNU6-930P-201ENST00000390938 100 ntBASIC-3.6□□□□□ -2.99
APOBP04114 RNU6-804P-201ENST00000384286 107 ntBASIC-3.61□□□□□ -2.99
APOBP04114 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.61□□□□□ -2.99
APOBP04114 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.61□□□□□ -2.99
APOBP04114 SNORA20.1-201ENST00000364790 130 ntBASIC-3.61□□□□□ -2.99
APOBP04114 SNORD113-4-201ENST00000364802 75 ntBASIC-3.61□□□□□ -2.99
APOBP04114 RNU6-539P-201ENST00000516665 103 ntBASIC-3.61□□□□□ -2.99
APOBP04114 MALAT1.1-201ENST00000618249 95 ntBASIC-3.61□□□□□ -2.99
APOBP04114 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.63□□□□□ -2.99
APOBP04114 MIR569-201ENST00000385228 96 ntBASIC-3.64□□□□□ -2.99
APOBP04114 Y_RNA.574-201ENST00000384766 95 ntBASIC-3.64□□□□□ -2.99
APOBP04114 AC069439.1-201ENST00000494739 167 ntBASIC-3.64□□□□□ -2.99
APOBP04114 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.65□□□□□ -2.99
APOBP04114 MIR4712-201ENST00000583750 82 ntBASIC-3.65□□□□□ -2.99
APOBP04114 AC141273.2-201ENST00000618989 130 ntBASIC-3.65□□□□□ -2.99
APOBP04114 MIR548F1-201ENST00000408667 84 ntBASIC-3.66□□□□□ -3
APOBP04114 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.66□□□□□ -3
APOBP04114 MIR3128-201ENST00000581957 66 ntBASIC-3.66□□□□□ -3
APOBP04114 IGLL4P-201ENST00000614590 133 ntBASIC-3.66□□□□□ -3
APOBP04114 RNU2-16P-201ENST00000410712 136 ntBASIC-3.67□□□□□ -3
APOBP04114 AL353621.2-201ENST00000605340 133 ntBASIC-3.67□□□□□ -3
APOBP04114 AC134503.1-201ENST00000633048 54 ntBASIC-3.67□□□□□ -3
APOBP04114 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.68□□□□□ -3
APOBP04114 RNU7-120P-201ENST00000459334 63 ntBASIC-3.68□□□□□ -3
APOBP04114 MIR548F3-201ENST00000408509 87 ntBASIC-3.69□□□□□ -3
APOBP04114 RNU6-829P-201ENST00000363700 112 ntBASIC-3.69□□□□□ -3
APOBP04114 Y_RNA.431-201ENST00000384086 102 ntBASIC-3.69□□□□□ -3
APOBP04114 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.7□□□□□ -3
APOBP04114 RNU6-718P-201ENST00000516166 105 ntBASIC-3.71□□□□□ -3
APOBP04114 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.73□□□□□ -3.01
APOBP04114 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.73□□□□□ -3.01
APOBP04114 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.74□□□□□ -3.01
APOBP04114 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.74□□□□□ -3.01
APOBP04114 MIR4666B-201ENST00000578142 81 ntBASIC-3.74□□□□□ -3.01
APOBP04114 RNU6-471P-201ENST00000383944 106 ntBASIC-3.74□□□□□ -3.01
APOBP04114 RNU6-257P-201ENST00000410238 98 ntBASIC-3.74□□□□□ -3.01
APOBP04114 MTND5P20-201ENST00000448677 143 ntBASIC-3.75□□□□□ -3.01
APOBP04114 RNU6-474P-201ENST00000384243 107 ntBASIC-3.75□□□□□ -3.01
APOBP04114 MIR5588-201ENST00000581890 63 ntBASIC-3.76□□□□□ -3.01
APOBP04114 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.77□□□□□ -3.01
APOBP04114 RNU6-200P-201ENST00000364743 107 ntBASIC-3.77□□□□□ -3.01
APOBP04114 RNU6-589P-201ENST00000516485 107 ntBASIC-3.78□□□□□ -3.01
APOBP04114 MTND4P29-201ENST00000503122 1372 ntBASIC-3.78□□□□□ -3.01
APOBP04114 RNU6-936P-201ENST00000384005 107 ntBASIC-3.78□□□□□ -3.01
APOBP04114 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-3.78□□□□□ -3.01
APOBP04114 RNU6-111P-201ENST00000517179 105 ntBASIC-3.78□□□□□ -3.01
APOBP04114 RNU6-242P-201ENST00000384359 107 ntBASIC-3.79□□□□□ -3.02
APOBP04114 AL117351.2-201ENST00000513571 157 ntBASIC-3.8□□□□□ -3.02
APOBP04114 U6.111-201ENST00000636093 83 ntBASIC-3.8□□□□□ -3.02
APOBP04114 MT-TD-201ENST00000387419 68 ntBASIC-3.81□□□□□ -3.02
APOBP04114 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.81□□□□□ -3.02
APOBP04114 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.82□□□□□ -3.02
APOBP04114 MIR548T-201ENST00000408369 74 ntBASIC-3.82□□□□□ -3.02
APOBP04114 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.82□□□□□ -3.02
APOBP04114 MIR3974-201ENST00000637126 96 ntBASIC-3.82□□□□□ -3.02
APOBP04114 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.83□□□□□ -3.02
APOBP04114 RNU6-32P-201ENST00000383948 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 RNU6-13P-201ENST00000384248 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 RNU6-12P-201ENST00000384604 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 RNU6-41P-201ENST00000384741 107 ntBASIC-3.84□□□□□ -3.02
APOBP04114 MIR3171-201ENST00000584270 74 ntBASIC-3.86□□□□□ -3.03
APOBP04114 Y_RNA.489-201ENST00000384410 101 ntBASIC-3.87□□□□□ -3.03
APOBP04114 Y_RNA.717-201ENST00000517106 92 ntBASIC-3.88□□□□□ -3.03
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms