Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MIR4748-201ENST00000578076 82 ntBASIC-2.84□□□□□ -2.86
NPHP4O75161 RNU6-361P-201ENST00000364454 107 ntBASIC-2.85□□□□□ -2.86
NPHP4O75161 AL606753.1-201ENST00000427435 87 ntBASIC-2.85□□□□□ -2.86
NPHP4O75161 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.85□□□□□ -2.87
NPHP4O75161 RNU6-44P-201ENST00000384045 107 ntBASIC-2.85□□□□□ -2.87
NPHP4O75161 AC097484.2-201ENST00000509147 251 ntBASIC-2.85□□□□□ -2.87
NPHP4O75161 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.85□□□□□ -2.87
NPHP4O75161 MIR4666B-201ENST00000578142 81 ntBASIC-2.85□□□□□ -2.87
NPHP4O75161 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.86□□□□□ -2.87
NPHP4O75161 SNORA25.5-201ENST00000363782 126 ntBASIC-2.87□□□□□ -2.87
NPHP4O75161 RNU6-663P-201ENST00000391105 106 ntBASIC-2.87□□□□□ -2.87
NPHP4O75161 SNORA40.16-201ENST00000517238 121 ntBASIC-2.88□□□□□ -2.87
NPHP4O75161 SNORD113-1-201ENST00000365321 69 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.89□□□□□ -2.87
NPHP4O75161 RNU6-787P-201ENST00000384032 107 ntBASIC-2.9□□□□□ -2.87
NPHP4O75161 RNU6-122P-201ENST00000516818 107 ntBASIC-2.9□□□□□ -2.87
NPHP4O75161 FTX_4.1-201ENST00000616291 147 ntBASIC-2.9□□□□□ -2.87
NPHP4O75161 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.91□□□□□ -2.87
NPHP4O75161 MIR450A2-201ENST00000385022 100 ntBASIC-2.91□□□□□ -2.87
NPHP4O75161 U7.4-201ENST00000614961 63 ntBASIC-2.91□□□□□ -2.87
NPHP4O75161 RNU6-634P-201ENST00000459134 106 ntBASIC-2.92□□□□□ -2.88
NPHP4O75161 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.92□□□□□ -2.88
NPHP4O75161 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.93□□□□□ -2.88
NPHP4O75161 MIR4426-201ENST00000640330 63 ntBASIC-2.93□□□□□ -2.88
NPHP4O75161 RNU6-912P-201ENST00000363800 104 ntBASIC-2.94□□□□□ -2.88
NPHP4O75161 SNORD45.2-201ENST00000363552 72 ntBASIC-2.96□□□□□ -2.88
NPHP4O75161 AL451105.1-201ENST00000450005 189 ntBASIC-2.96□□□□□ -2.88
NPHP4O75161 RNU7-119P-201ENST00000459279 63 ntBASIC-2.96□□□□□ -2.88
NPHP4O75161 RNU6-294P-201ENST00000364999 102 ntBASIC-2.97□□□□□ -2.88
NPHP4O75161 SNORA25.4-201ENST00000363666 124 ntBASIC-2.98□□□□□ -2.89
NPHP4O75161 SNORD113-3-201ENST00000364830 72 ntBASIC-2.98□□□□□ -2.89
NPHP4O75161 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.98□□□□□ -2.89
NPHP4O75161 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.98□□□□□ -2.89
NPHP4O75161 RNY4P9-201ENST00000363194 97 ntBASIC-2.99□□□□□ -2.89
NPHP4O75161 SNORD30.1-201ENST00000391309 70 ntBASIC-2.99□□□□□ -2.89
NPHP4O75161 RNU6-300P-201ENST00000459080 104 ntBASIC-3□□□□□ -2.89
NPHP4O75161 MIR379-201ENST00000362218 67 ntBASIC-3.01□□□□□ -2.89
NPHP4O75161 RNU6-68P-201ENST00000516576 104 ntBASIC-3.01□□□□□ -2.89
NPHP4O75161 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.02□□□□□ -2.89
NPHP4O75161 RNU6-230P-201ENST00000362457 104 ntBASIC-3.02□□□□□ -2.89
NPHP4O75161 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.02□□□□□ -2.89
NPHP4O75161 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.02□□□□□ -2.89
NPHP4O75161 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.02□□□□□ -2.89
NPHP4O75161 RNU6-590P-201ENST00000365039 107 ntBASIC-3.02□□□□□ -2.89
NPHP4O75161 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.02□□□□□ -2.89
NPHP4O75161 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.04□□□□□ -2.9
NPHP4O75161 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.05□□□□□ -2.9
NPHP4O75161 RNU6-940P-201ENST00000363433 104 ntBASIC-3.07□□□□□ -2.9
NPHP4O75161 RNU6-153P-201ENST00000364422 104 ntBASIC-3.07□□□□□ -2.9
NPHP4O75161 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.07□□□□□ -2.9
NPHP4O75161 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.08□□□□□ -2.9
NPHP4O75161 RNU6-820P-201ENST00000384273 107 ntBASIC-3.08□□□□□ -2.9
NPHP4O75161 AC062037.1-201ENST00000605302 128 ntBASIC-3.08□□□□□ -2.9
NPHP4O75161 RNU6-176P-201ENST00000517196 105 ntBASIC-3.09□□□□□ -2.9
NPHP4O75161 RNU6-742P-201ENST00000365289 107 ntBASIC-3.1□□□□□ -2.91
NPHP4O75161 MIR4511-201ENST00000582784 87 ntBASIC-3.1□□□□□ -2.91
NPHP4O75161 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.1□□□□□ -2.91
NPHP4O75161 RNU6-141P-201ENST00000410499 105 ntBASIC-3.11□□□□□ -2.91
NPHP4O75161 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.11□□□□□ -2.91
NPHP4O75161 RNU6-419P-201ENST00000517030 63 ntBASIC-3.11□□□□□ -2.91
NPHP4O75161 MIR3938-201ENST00000582157 103 ntBASIC-3.11□□□□□ -2.91
NPHP4O75161 MIR1254-1-201ENST00000408257 97 ntBASIC-3.13□□□□□ -2.91
NPHP4O75161 MIR5582-201ENST00000579697 68 ntBASIC-3.13□□□□□ -2.91
NPHP4O75161 U6.111-201ENST00000636093 83 ntBASIC-3.13□□□□□ -2.91
NPHP4O75161 RNU6-871P-201ENST00000516122 100 ntBASIC-3.15□□□□□ -2.91
NPHP4O75161 RNU6-406P-201ENST00000516470 107 ntBASIC-3.15□□□□□ -2.91
NPHP4O75161 AC103706.3-201ENST00000636297 85 ntBASIC-3.15□□□□□ -2.91
NPHP4O75161 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.16□□□□□ -2.92
NPHP4O75161 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.16□□□□□ -2.92
NPHP4O75161 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.16□□□□□ -2.92
NPHP4O75161 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.17□□□□□ -2.92
NPHP4O75161 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.2□□□□□ -2.92
NPHP4O75161 RNU6-539P-201ENST00000516665 103 ntBASIC-3.2□□□□□ -2.92
NPHP4O75161 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.2□□□□□ -2.92
NPHP4O75161 RNU6-803P-201ENST00000516034 102 ntBASIC-3.21□□□□□ -2.92
NPHP4O75161 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.23□□□□□ -2.93
NPHP4O75161 MIR1255A-201ENST00000408338 113 ntBASIC-3.25□□□□□ -2.93
NPHP4O75161 RNU6-857P-201ENST00000515893 110 ntBASIC-3.25□□□□□ -2.93
NPHP4O75161 MIR3202-2-201ENST00000635980 79 ntBASIC-3.25□□□□□ -2.93
NPHP4O75161 RNU6-573P-201ENST00000383938 106 ntBASIC-3.26□□□□□ -2.93
NPHP4O75161 AL603908.1-201ENST00000406098 201 ntBASIC-3.27□□□□□ -2.93
NPHP4O75161 RNU6-800P-201ENST00000384473 103 ntBASIC-3.27□□□□□ -2.93
NPHP4O75161 MIR4679-1-201ENST00000637619 75 ntBASIC-3.28□□□□□ -2.94
NPHP4O75161 RNU6-345P-201ENST00000517001 107 ntBASIC-3.29□□□□□ -2.94
NPHP4O75161 AC110620.1-201ENST00000416042 228 ntBASIC-3.3□□□□□ -2.94
NPHP4O75161 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.31□□□□□ -2.94
NPHP4O75161 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.32□□□□□ -2.94
NPHP4O75161 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.33□□□□□ -2.94
NPHP4O75161 MIR548X-201ENST00000580069 75 ntBASIC-3.33□□□□□ -2.94
NPHP4O75161 RNU6-279P-201ENST00000391297 101 ntBASIC-3.34□□□□□ -2.94
NPHP4O75161 SNORD73B-201ENST00000364394 72 ntBASIC-3.35□□□□□ -2.95
NPHP4O75161 RNU6-822P-201ENST00000362707 106 ntBASIC-3.36□□□□□ -2.95
NPHP4O75161 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.37□□□□□ -2.95
NPHP4O75161 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.37□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 437.2 ms