Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC013734.1-201ENST00000619329 111 ntBASIC-2.03□□□□□ -2.73
PRAMEF11O60813 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.03□□□□□ -2.73
PRAMEF11O60813 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.04□□□□□ -2.74
PRAMEF11O60813 RNY3P8-201ENST00000411366 126 ntBASIC-2.04□□□□□ -2.74
PRAMEF11O60813 RNU7-119P-201ENST00000459279 63 ntBASIC-2.04□□□□□ -2.74
PRAMEF11O60813 RNU6-980P-201ENST00000516925 103 ntBASIC-2.05□□□□□ -2.74
PRAMEF11O60813 SNORD114-3-201ENST00000364969 75 ntBASIC-2.06□□□□□ -2.74
PRAMEF11O60813 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.06□□□□□ -2.74
PRAMEF11O60813 Y_RNA.685-201ENST00000516532 108 ntBASIC-2.06□□□□□ -2.74
PRAMEF11O60813 SNORA40.16-201ENST00000517238 121 ntBASIC-2.06□□□□□ -2.74
PRAMEF11O60813 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.07□□□□□ -2.74
PRAMEF11O60813 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.07□□□□□ -2.74
PRAMEF11O60813 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.07□□□□□ -2.74
PRAMEF11O60813 RNA5SP405-201ENST00000363059 114 ntBASIC-2.08□□□□□ -2.74
PRAMEF11O60813 MIR548AM-201ENST00000584298 74 ntBASIC-2.08□□□□□ -2.74
PRAMEF11O60813 U6.97-201ENST00000636904 101 ntBASIC-2.08□□□□□ -2.74
PRAMEF11O60813 RNU6-841P-201ENST00000383872 107 ntBASIC-2.09□□□□□ -2.74
PRAMEF11O60813 RNU6-520P-201ENST00000384717 104 ntBASIC-2.09□□□□□ -2.74
PRAMEF11O60813 MIR3139-201ENST00000579145 76 ntBASIC-2.09□□□□□ -2.74
PRAMEF11O60813 MIR466-201ENST00000580653 84 ntBASIC-2.1□□□□□ -2.75
PRAMEF11O60813 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.1□□□□□ -2.75
PRAMEF11O60813 MIR496-201ENST00000385226 102 ntBASIC-2.11□□□□□ -2.75
PRAMEF11O60813 MIR3938-201ENST00000582157 103 ntBASIC-2.11□□□□□ -2.75
PRAMEF11O60813 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.12□□□□□ -2.75
PRAMEF11O60813 RNU4-88P-201ENST00000411220 86 ntBASIC-2.12□□□□□ -2.75
PRAMEF11O60813 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.13□□□□□ -2.75
PRAMEF11O60813 RNU6-194P-201ENST00000363862 105 ntBASIC-2.14□□□□□ -2.75
PRAMEF11O60813 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.14□□□□□ -2.75
PRAMEF11O60813 MT-TM-201ENST00000387377 68 ntBASIC-2.15□□□□□ -2.75
PRAMEF11O60813 AC110620.1-201ENST00000416042 228 ntBASIC-2.16□□□□□ -2.76
PRAMEF11O60813 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.16□□□□□ -2.76
PRAMEF11O60813 RNU6-1275P-201ENST00000391087 107 ntBASIC-2.18□□□□□ -2.76
PRAMEF11O60813 MIR202-201ENST00000362219 110 ntBASIC-2.19□□□□□ -2.76
PRAMEF11O60813 RNU6-119P-201ENST00000364882 107 ntBASIC-2.19□□□□□ -2.76
PRAMEF11O60813 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.19□□□□□ -2.76
PRAMEF11O60813 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.19□□□□□ -2.76
PRAMEF11O60813 AC114801.3-201ENST00000510231 177 ntBASIC-2.21□□□□□ -2.76
PRAMEF11O60813 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.22□□□□□ -2.76
PRAMEF11O60813 SNORD60-201ENST00000383903 83 ntBASIC-2.22□□□□□ -2.76
PRAMEF11O60813 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.22□□□□□ -2.76
PRAMEF11O60813 RNU6-530P-201ENST00000391180 107 ntBASIC-2.22□□□□□ -2.76
PRAMEF11O60813 snoU13.10-201ENST00000459301 103 ntBASIC-2.22□□□□□ -2.76
PRAMEF11O60813 MIR548W-201ENST00000581970 74 ntBASIC-2.22□□□□□ -2.76
PRAMEF11O60813 AL451105.1-201ENST00000450005 189 ntBASIC-2.23□□□□□ -2.77
PRAMEF11O60813 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.23□□□□□ -2.77
PRAMEF11O60813 SNORD45.2-201ENST00000363552 72 ntBASIC-2.24□□□□□ -2.77
PRAMEF11O60813 RNU6-471P-201ENST00000383944 106 ntBASIC-2.24□□□□□ -2.77
PRAMEF11O60813 MIR581-201ENST00000384895 96 ntBASIC-2.25□□□□□ -2.77
PRAMEF11O60813 MIR1207-201ENST00000408249 87 ntBASIC-2.25□□□□□ -2.77
PRAMEF11O60813 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.25□□□□□ -2.77
PRAMEF11O60813 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.26□□□□□ -2.77
PRAMEF11O60813 SNORA17.4-201ENST00000391287 132 ntBASIC-2.27□□□□□ -2.77
PRAMEF11O60813 SNORD18C-201ENST00000362704 69 ntBASIC-2.28□□□□□ -2.77
PRAMEF11O60813 RNU6-361P-201ENST00000364454 107 ntBASIC-2.28□□□□□ -2.77
PRAMEF11O60813 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.28□□□□□ -2.77
PRAMEF11O60813 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.31□□□□□ -2.78
PRAMEF11O60813 MIR548N-201ENST00000408742 75 ntBASIC-2.31□□□□□ -2.78
PRAMEF11O60813 RNU6-419P-201ENST00000517030 63 ntBASIC-2.31□□□□□ -2.78
PRAMEF11O60813 SNORD54-201ENST00000459159 67 ntBASIC-2.33□□□□□ -2.78
PRAMEF11O60813 SNORA72.7-201ENST00000516349 94 ntBASIC-2.33□□□□□ -2.78
PRAMEF11O60813 MIR4723-201ENST00000585070 81 ntBASIC-2.34□□□□□ -2.78
PRAMEF11O60813 MIR4426-201ENST00000640330 63 ntBASIC-2.34□□□□□ -2.78
PRAMEF11O60813 MIR4748-201ENST00000578076 82 ntBASIC-2.37□□□□□ -2.79
PRAMEF11O60813 RNA5SP93-201ENST00000362525 114 ntBASIC-2.38□□□□□ -2.79
PRAMEF11O60813 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.38□□□□□ -2.79
PRAMEF11O60813 AC097484.2-201ENST00000509147 251 ntBASIC-2.42□□□□□ -2.8
PRAMEF11O60813 RNU6-300P-201ENST00000459080 104 ntBASIC-2.43□□□□□ -2.8
PRAMEF11O60813 RNU6-446P-201ENST00000362827 106 ntBASIC-2.44□□□□□ -2.8
PRAMEF11O60813 FTX_4.1-201ENST00000616291 147 ntBASIC-2.44□□□□□ -2.8
PRAMEF11O60813 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.45□□□□□ -2.8
PRAMEF11O60813 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.45□□□□□ -2.8
PRAMEF11O60813 RNU6-638P-201ENST00000516582 104 ntBASIC-2.45□□□□□ -2.8
PRAMEF11O60813 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 MIR548X-201ENST00000580069 75 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.46□□□□□ -2.8
PRAMEF11O60813 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.47□□□□□ -2.8
PRAMEF11O60813 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.47□□□□□ -2.8
PRAMEF11O60813 RNU6-590P-201ENST00000365039 107 ntBASIC-2.48□□□□□ -2.81
PRAMEF11O60813 RNU6-742P-201ENST00000365289 107 ntBASIC-2.48□□□□□ -2.81
PRAMEF11O60813 RNU6-176P-201ENST00000517196 105 ntBASIC-2.48□□□□□ -2.81
PRAMEF11O60813 RNU6-912P-201ENST00000363800 104 ntBASIC-2.49□□□□□ -2.81
PRAMEF11O60813 RNU6-230P-201ENST00000362457 104 ntBASIC-2.5□□□□□ -2.81
PRAMEF11O60813 RNU6-68P-201ENST00000516576 104 ntBASIC-2.5□□□□□ -2.81
PRAMEF11O60813 SNORD113-3-201ENST00000364830 72 ntBASIC-2.51□□□□□ -2.81
PRAMEF11O60813 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.52□□□□□ -2.81
PRAMEF11O60813 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.52□□□□□ -2.81
PRAMEF11O60813 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.52□□□□□ -2.81
PRAMEF11O60813 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.53□□□□□ -2.81
PRAMEF11O60813 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.53□□□□□ -2.81
PRAMEF11O60813 RNU6-141P-201ENST00000410499 105 ntBASIC-2.53□□□□□ -2.81
PRAMEF11O60813 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.53□□□□□ -2.81
PRAMEF11O60813 MIR379-201ENST00000362218 67 ntBASIC-2.54□□□□□ -2.82
PRAMEF11O60813 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.54□□□□□ -2.82
PRAMEF11O60813 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.54□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 262.9 ms