Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 RNU6-995P-201ENST00000391244 107 ntBASIC-1.17□□□□□ -2.6
SYNCRIPO60506 RNU6-638P-201ENST00000516582 104 ntBASIC-1.17□□□□□ -2.6
SYNCRIPO60506 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.17□□□□□ -2.6
SYNCRIPO60506 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.18□□□□□ -2.6
SYNCRIPO60506 AC090616.4-201ENST00000448026 115 ntBASIC-1.18□□□□□ -2.6
SYNCRIPO60506 RNU7-160P-201ENST00000516660 62 ntBASIC-1.18□□□□□ -2.6
SYNCRIPO60506 RNU6-231P-201ENST00000517122 103 ntBASIC-1.18□□□□□ -2.6
SYNCRIPO60506 RNU6-940P-201ENST00000363433 104 ntBASIC-1.19□□□□□ -2.6
SYNCRIPO60506 RNU6-194P-201ENST00000363862 105 ntBASIC-1.19□□□□□ -2.6
SYNCRIPO60506 RNU6-164P-201ENST00000364604 103 ntBASIC-1.19□□□□□ -2.6
SYNCRIPO60506 AC114801.3-201ENST00000510231 177 ntBASIC-1.19□□□□□ -2.6
SYNCRIPO60506 MIR7110-201ENST00000612638 86 ntBASIC-1.19□□□□□ -2.6
SYNCRIPO60506 RNU6-669P-201ENST00000365575 107 ntBASIC-1.2□□□□□ -2.6
SYNCRIPO60506 MIR23C-201ENST00000579846 100 ntBASIC-1.2□□□□□ -2.6
SYNCRIPO60506 RNU6-471P-201ENST00000383944 106 ntBASIC-1.21□□□□□ -2.6
SYNCRIPO60506 AC110620.1-201ENST00000416042 228 ntBASIC-1.21□□□□□ -2.6
SYNCRIPO60506 RPL35AP4-201ENST00000412007 102 ntBASIC-1.22□□□□□ -2.6
SYNCRIPO60506 MIR6874-201ENST00000635894 71 ntBASIC-1.22□□□□□ -2.6
SYNCRIPO60506 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.24□□□□□ -2.61
SYNCRIPO60506 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.24□□□□□ -2.61
SYNCRIPO60506 RNU6-247P-201ENST00000362636 107 ntBASIC-1.25□□□□□ -2.61
SYNCRIPO60506 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.25□□□□□ -2.61
SYNCRIPO60506 MIR579-201ENST00000385221 98 ntBASIC-1.25□□□□□ -2.61
SYNCRIPO60506 RNU7-119P-201ENST00000459279 63 ntBASIC-1.25□□□□□ -2.61
SYNCRIPO60506 SNORA27.2-201ENST00000363365 126 ntBASIC-1.27□□□□□ -2.61
SYNCRIPO60506 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.27□□□□□ -2.61
SYNCRIPO60506 RNU6-258P-201ENST00000390884 101 ntBASIC-1.27□□□□□ -2.61
SYNCRIPO60506 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.27□□□□□ -2.61
SYNCRIPO60506 MIR3938-201ENST00000582157 103 ntBASIC-1.27□□□□□ -2.61
SYNCRIPO60506 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.27□□□□□ -2.61
SYNCRIPO60506 SNORA40B-201ENST00000385573 128 ntBASIC-1.28□□□□□ -2.61
SYNCRIPO60506 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.28□□□□□ -2.61
SYNCRIPO60506 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.29□□□□□ -2.62
SYNCRIPO60506 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.29□□□□□ -2.62
SYNCRIPO60506 MIR466-201ENST00000580653 84 ntBASIC-1.29□□□□□ -2.62
SYNCRIPO60506 RNU6-810P-201ENST00000364001 107 ntBASIC-1.3□□□□□ -2.62
SYNCRIPO60506 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.3□□□□□ -2.62
SYNCRIPO60506 SNORD63.2-201ENST00000516303 64 ntBASIC-1.3□□□□□ -2.62
SYNCRIPO60506 SNORA40.16-201ENST00000517238 121 ntBASIC-1.3□□□□□ -2.62
SYNCRIPO60506 RNU6-520P-201ENST00000384717 104 ntBASIC-1.31□□□□□ -2.62
SYNCRIPO60506 SNORD116.2-201ENST00000391251 93 ntBASIC-1.31□□□□□ -2.62
SYNCRIPO60506 AC018880.2-201ENST00000414265 201 ntBASIC-1.31□□□□□ -2.62
SYNCRIPO60506 RNU6-79P-201ENST00000362511 107 ntBASIC-1.32□□□□□ -2.62
SYNCRIPO60506 RNU6-828P-201ENST00000364876 107 ntBASIC-1.32□□□□□ -2.62
SYNCRIPO60506 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.33□□□□□ -2.62
SYNCRIPO60506 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.33□□□□□ -2.62
SYNCRIPO60506 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.34□□□□□ -2.62
SYNCRIPO60506 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.35□□□□□ -2.63
SYNCRIPO60506 RNU6-590P-201ENST00000365039 107 ntBASIC-1.38□□□□□ -2.63
SYNCRIPO60506 RNU6-974P-201ENST00000384099 108 ntBASIC-1.38□□□□□ -2.63
SYNCRIPO60506 RNU6-400P-201ENST00000391173 106 ntBASIC-1.38□□□□□ -2.63
SYNCRIPO60506 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.38□□□□□ -2.63
SYNCRIPO60506 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.38□□□□□ -2.63
SYNCRIPO60506 RNA5SP106-201ENST00000517274 100 ntBASIC-1.4□□□□□ -2.63
SYNCRIPO60506 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
SYNCRIPO60506 RNU4-88P-201ENST00000411220 86 ntBASIC-1.42□□□□□ -2.64
SYNCRIPO60506 AC120024.2-201ENST00000576526 175 ntBASIC-1.42□□□□□ -2.64
SYNCRIPO60506 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.46□□□□□ -2.64
SYNCRIPO60506 AL451105.1-201ENST00000450005 189 ntBASIC-1.46□□□□□ -2.64
SYNCRIPO60506 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.47□□□□□ -2.64
SYNCRIPO60506 RNU6-563P-201ENST00000364872 108 ntBASIC-1.47□□□□□ -2.64
SYNCRIPO60506 RNY4P10-201ENST00000365571 96 ntBASIC-1.47□□□□□ -2.64
SYNCRIPO60506 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
SYNCRIPO60506 RNU6-419P-201ENST00000517030 63 ntBASIC-1.47□□□□□ -2.64
SYNCRIPO60506 SNORD45.2-201ENST00000363552 72 ntBASIC-1.48□□□□□ -2.65
SYNCRIPO60506 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.48□□□□□ -2.65
SYNCRIPO60506 MIR509-1-201ENST00000385265 94 ntBASIC-1.48□□□□□ -2.65
SYNCRIPO60506 MIR509-2-201ENST00000390724 91 ntBASIC-1.48□□□□□ -2.65
SYNCRIPO60506 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.49□□□□□ -2.65
SYNCRIPO60506 RNU6-987P-201ENST00000384759 104 ntBASIC-1.5□□□□□ -2.65
SYNCRIPO60506 RNY3P8-201ENST00000411366 126 ntBASIC-1.5□□□□□ -2.65
SYNCRIPO60506 RNU6-446P-201ENST00000362827 106 ntBASIC-1.51□□□□□ -2.65
SYNCRIPO60506 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.51□□□□□ -2.65
SYNCRIPO60506 RNU6-361P-201ENST00000364454 107 ntBASIC-1.52□□□□□ -2.65
SYNCRIPO60506 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
SYNCRIPO60506 AC125388.1-201ENST00000459631 156 ntBASIC-1.52□□□□□ -2.65
SYNCRIPO60506 AC013734.1-201ENST00000619329 111 ntBASIC-1.52□□□□□ -2.65
SYNCRIPO60506 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.53□□□□□ -2.65
SYNCRIPO60506 MIR4748-201ENST00000578076 82 ntBASIC-1.53□□□□□ -2.65
SYNCRIPO60506 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.54□□□□□ -2.66
SYNCRIPO60506 MIR548AM-201ENST00000584298 74 ntBASIC-1.54□□□□□ -2.66
SYNCRIPO60506 RNU6-695P-201ENST00000391157 104 ntBASIC-1.56□□□□□ -2.66
SYNCRIPO60506 SNORD60-201ENST00000383903 83 ntBASIC-1.57□□□□□ -2.66
SYNCRIPO60506 MIR548N-201ENST00000408742 75 ntBASIC-1.57□□□□□ -2.66
SYNCRIPO60506 AC139453.2-201ENST00000487255 133 ntBASIC-1.57□□□□□ -2.66
SYNCRIPO60506 MIR5693-201ENST00000577722 73 ntBASIC-1.57□□□□□ -2.66
SYNCRIPO60506 MIR548X-201ENST00000580069 75 ntBASIC-1.57□□□□□ -2.66
SYNCRIPO60506 RNU6-530P-201ENST00000391180 107 ntBASIC-1.58□□□□□ -2.66
SYNCRIPO60506 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.58□□□□□ -2.66
SYNCRIPO60506 SNORA17.4-201ENST00000391287 132 ntBASIC-1.6□□□□□ -2.67
SYNCRIPO60506 MIR202-201ENST00000362219 110 ntBASIC-1.61□□□□□ -2.67
SYNCRIPO60506 RNU6-829P-201ENST00000363700 112 ntBASIC-1.61□□□□□ -2.67
SYNCRIPO60506 FTX_4.1-201ENST00000616291 147 ntBASIC-1.61□□□□□ -2.67
SYNCRIPO60506 SNORD18C-201ENST00000362704 69 ntBASIC-1.62□□□□□ -2.67
SYNCRIPO60506 RNU6-841P-201ENST00000383872 107 ntBASIC-1.63□□□□□ -2.67
SYNCRIPO60506 MIR633-201ENST00000384821 98 ntBASIC-1.64□□□□□ -2.67
SYNCRIPO60506 RNY4P9-201ENST00000363194 97 ntBASIC-1.65□□□□□ -2.67
SYNCRIPO60506 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.65□□□□□ -2.67
SYNCRIPO60506 MIR3123-201ENST00000583417 75 ntBASIC-1.65□□□□□ -2.67
SYNCRIPO60506 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms